New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5012291 =	72 (0.990)	4 (0.060)	3/230	NT	5.9%	coding (166/402 nt)	PP_5676	hypothetical protein
	?	NC_002947	5012380 =	61 (0.900)					coding (77/402 nt)	PP_5676	hypothetical protein

CAGATAGCCGCCTTCAGCTACACGGGTTGAACCGTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGAGCGTCCATAATGTCCTCCGCCGGCGGACTTCACGGAGATG  >  NC_002947/5012142‑5012435                                                                                                                                                      |                                                                                                                                                 catcgagttcgtcgaacagatgcttgctggcgagggcgggctcggtcgcaagcctcactaggaattgacgccatggccagtgatgattcgcttcatctccgtgaagtccgccggcggaggacattatggacgctcgcccaccttgacgct                                                                                                                                                  <  1:368956‑M1/1‑1 (MQ=255) catcgagttcgtcgaacagatgcttgctggcgaacgcgggctcggtcgcaagcctcactaggaattgacgccatggccagtgatgattcgcttcatctccgtgaagtccgccggcggaggacattatggacgctcgcccaccttgacgct                                                                                                                                                  <  1:1125439‑M1/1‑1 (MQ=255)  gtcgagttcgtcgaacagatgcttgctggcgagggcgggctcggtcgcaagcctcactgggaattgacgccatggccagtgatgattcgcttcatctccgttaagtccgccggcggaggacattatggacgctcgcccaccttgccgcTg                                                                                                                                                 <  2:182094‑M1/2‑1 (MQ=255)  atcgagttcgtcgaacagatgcttgctggcgagggcgggctcggtcgcaagcctcactaggaattgacgccatggccagtgatgattcgcttcatctccgtgaagtccgccggcggaggacattatggacgctcgcccaccttgacgcTg                                                                                                                                                 >  2:201617‑M1/149‑150 (MQ=255)  atcgagttcgtcgaacagatgcttgctggcgagggcgggctcggtcgcaagcctcactaggaattgacgccatggccagtgatgattcgcttcatctccgtgaagtccgccggcggaggacattatggacgcgcgcccaccttgacgcTg                                                                                                                                                 <  1:592276‑M1/2‑1 (MQ=255)  atcgagttcgtccaacagatgcttgctggcgagggcgggctcggtcgcaagcctcactaggaattgacgccatggccagtgatgattcgcttcatctccgtgaagtccgccggcggaggacattatggacgctcgcccaccttgacgcTg                                                                                                                                                 >  1:866389‑M1/149‑150 (MQ=255)  aGATAGCCGCCTTCAGCTACACGGGTTGAACCGTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACggtg                                                                                                                                                 <  1:1178329/150‑1 (MQ=255)    aTAGCCGCCTTCAGCTACACGGGTTGAACCGTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACggtggt                                                                                                                                               <  2:1246677/150‑1 (MQ=255)      agttcgtcgaacagatgcttgctggcgagggcgggctcggtcgcaagcctcactaggaattgacgccatggccagtgatgattcgcttcatctccgtgaagtccgccggcggaggacattatggacgctcgcccaccttgacgcTGGTGa                                                                                                                                             >  1:438504‑M1/145‑150 (MQ=255)          gccTTCAGCTACACGGGTTGAACCGTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCg                                                                                                                                         >  1:144202/1‑150 (MQ=255)           ccTTCAGCTACACGGGTTGAACCGTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGa                                                                                                                                        <  1:1713416/150‑1 (MQ=255)            cTTCAGCTACACGGGTTGAACCGTAGCTTGCACGCAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGAc                                                                                                                                       <  2:459349/150‑1 (MQ=255)            cTTCAGCTACACGGGTTGAACCGTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGAc                                                                                                                                       >  2:1783519/1‑150 (MQ=255)            cTTCAGCTACACGGGTTGAACCGTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGAc                                                                                                                                       <  2:1335471/150‑1 (MQ=255)                aGCTACACGGGTTGAACCGTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCTAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTTATCCGACCTgt                                                                                                                                   >  2:640661/1‑149 (MQ=255)                 gCTACACGGGTTGAACCGTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGACGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGAc                                                                                                                                  <  1:933402/150‑1 (MQ=255)                   tACACGGGTTGAACCGTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGAccc                                                                                                                                >  1:482501/1‑150 (MQ=255)                        gggTTGAACCGTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACccaagcc                                                                                                                           >  2:1274953/1‑150 (MQ=255)                         ggTTGAACCGTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACccaagcca                                                                                                                          >  1:1227149/1‑150 (MQ=255)                          gTTGAACCGTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACccaagccaa                                                                                                                         <  2:1463234/150‑1 (MQ=255)                           ttGAACCGTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACccaagccaag                                                                                                                        <  2:1227149/150‑1 (MQ=255)                             gAACCGTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCCCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCt                                                                                                                      <  2:1737606/150‑1 (MQ=255)                              aaCCGTAGCTTAAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGACTCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGCTGGTGATCCGACCTGACCCAAGCCAAGCtt                                                                                                                     <  1:640661/150‑1 (MQ=255)                                  gTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGACTGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTc                                                                                                                 >  2:371992/1‑150 (MQ=255)                                  gTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTc                                                                                                                 <  2:844231/150‑1 (MQ=255)                                    aGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCct                                                                                                               <  2:1589294/150‑1 (MQ=255)                                     gCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCctg                                                                                                              <  1:794537/150‑1 (MQ=255)                                      cTTGAACACAAGAAGCGCACACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCctgc                                                                                                             >  2:173597/1‑150 (MQ=255)                                          tcggtcgcaagcctcactaggaattgacgccatggccagtgatgattcgcttcatctccgtgaagtccgccggcggaggacattatggacgctcgcccaccttgacgcTg                                                                                                                                                 >  2:1806184‑M1/109‑110 (MQ=255)                                          tcggtcgcaagcctcactaggaattgacgccatggccagtgatgattcgcttcatctccgtgaagtccgccggcggaggacattatggacgctcgcccaccttgacgcTg                                                                                                                                                 <  1:1806184‑M1/2‑1 (MQ=255)                                           acacAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTc                                                                                                        >  1:214191/1‑150 (MQ=255)                                                agaagCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAAtct                                                                                                   >  2:1116608/1‑150 (MQ=255)                                                 gaagCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCctgctg                                                                                                           <  2:1626944/141‑1 (MQ=255)                                                 gaagCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCctgctg                                                                                                           >  1:1626944/1‑141 (MQ=255)                                                 gaagCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAAtctc                                                                                                  >  1:881016/1‑150 (MQ=255)                                                      gcTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGCTCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCctgc                                                                                                             >  1:1344530/1‑134 (MQ=255)                                                      gcTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCctgc                                                                                                             <  2:1344530/134‑1 (MQ=255)                                                      gcTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCa                                                                                             <  2:214191/150‑1 (MQ=255)                                                      ctcactaggaattgacgccatggccagtgatgattcgcttcatctccgtgaagtccgccggcggaggacattatggacgctcgcccaccttgacgcTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCa                                                                                             <  2:1934363‑M1/54‑1 (MQ=255)                                                          aCGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACGTGAGGCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCAc                                                                                         >  1:593840/1‑150 (MQ=255)                                                          aCGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCAc                                                                                         <  1:714643/150‑1 (MQ=255)                                                            gCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCAccc                                                                                       <  1:1707788/150‑1 (MQ=255)                                                              cACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCtt                                                                                     >  2:1237233/1‑150 (MQ=255)                                                               aattgacgccatggccagtgatgattcgcttcatctccgtgaagtccgccggcggaggacattatggacgctcgcccaccttgacgcTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTa                                                                                    <  1:1641876‑M1/63‑1 (MQ=255)                                                                attgacgccatggccagtgatgattcgcttcatctccgtgaagtccgccggcggaggacattatggacgctcgcccaccttgacgcTGGTGATc                                                                                                                                           <  2:677587‑M1/8‑1 (MQ=255)                                                                attgacgccatggccagtgatgattcgcttcatctccgtgaagtccgccggcggaggacattatggacgctcgcccaccttgacgcTGGTGATc                                                                                                                                           >  1:677587‑M1/87‑94 (MQ=255)                                                                  gCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTaaaa                                                                                 <  2:144202/150‑1 (MQ=255)                                                                        gTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATa                                                                           >  2:834302/1‑150 (MQ=255)                                                                             gCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACggtgg                                                                                                                                                <  2:1664210/76‑1 (MQ=255)                                                                             gCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACggtgg                                                                                                                                                >  1:1664210/1‑76 (MQ=255)                                                                              cATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACccaagc                                                                                                                            >  2:1767262/1‑95 (MQ=255)                                                                              cATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACccaagc                                                                                                                            <  1:1767262/95‑1 (MQ=255)                                                                              cATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGctc                                                                     <  1:834302/150‑1 (MQ=255)                                                                                tCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCtt                                                                   <  1:1783519/150‑1 (MQ=255)                                                                                   tCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCAcc                                                                                        <  2:1229341/126‑1 (MQ=255)                                                                                   tCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCAcc                                                                                        >  1:1229341/1‑126 (MQ=255)                                                                                        tACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCAcc                                                           >  1:552394/1‑150 (MQ=255)                                                                                           gATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGc                                                        <  2:1339165/150‑1 (MQ=255)                                                                                           gATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGc                                                        <  2:552394/150‑1 (MQ=255)                                                                                           cttcatctccgtgaagtccgccggcggaggacattatggacgctcgcccaccttgacgcTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGAtcacccgc                                                        >  1:1934363‑M1/60‑147 (MQ=255)                                                                                               gATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCa                                                    >  1:289660/1‑150 (MQ=255)                                                                                                  atCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCACCGGTGGTGATCCGACCTGACCCAAGCCACGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGCTCACCAGCGTCAAgg                                                 <  2:53897/150‑1 (MQ=255)                                                                                                    cccAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTg                                               >  2:1723788/1‑150 (MQ=255)                                                                                                     ccAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCctgc                                                                                                             <  1:966125/87‑1 (MQ=255)                                                                                                     ccAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCctgc                                                                                                             >  2:966125/1‑87 (MQ=255)                                                                                                      cAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGAt                                                               >  1:463832/1‑132 (MQ=255)                                                                                                      cAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGAt                                                               <  2:463832/132‑1 (MQ=255)                                                                                                         tCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGa                                          <  1:1116608/150‑1 (MQ=255)                                                                                                          gtccgccggcggaggacattatggacgctcgcccaccttgacgcTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGAg                                         >  2:1641876‑M1/45‑150 (MQ=255)                                                                                                            aaTGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACggtgg                                                                                                                                                >  2:14642/1‑45 (MQ=255)                                                                                                            aaTGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACggtgg                                                                                                                                                <  1:14642/45‑1 (MQ=255)                                                                                                                  gCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGAGCGTCCATa                                 >  1:1356460/1‑150 (MQ=255)                                                                                                                       gagGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCTACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCTTCAAGGTGGGCGAGCGTCCATAATGtc                            >  2:146464/1‑150 (MQ=255)                                                                                                                        agGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGAGCGTCCATAATGtcc                           <  2:1356460/150‑1 (MQ=255)                                                                                                                         ggCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGAGCGTCCATAATGtcct                          <  1:371992/150‑1 (MQ=255)                                                                                                                          gCTACCTGCTACGCCATCTCGTCAACGGTGGTGATCCGACCTCACCCCAGCCACGCTTGTTCCTGCTGCCCAATCTCACTCACCACCCTTATCTCCCACTTCTCTCTTGGCTCACCCCCGTCAACGTGGGCGAGCGTCCATAATGtcctc                         <  2:115718/150‑1 (MQ=9)                                                                                                                          gCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCAccc                                                                                       <  1:4133/88‑1 (MQ=38)                                                                                                                          gCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCAccc                                                                                       >  2:4133/1‑88 (MQ=39)                                                                                                                          gCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCtt                                                                   <  1:1206964/108‑1 (MQ=255)                                                                                                                          gCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCtt                                                                   >  2:1206964/1‑108 (MQ=255)                                                                                                                          gCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGAGCGTCCATAATGtcctc                         <  2:881016/150‑1 (MQ=255)                                                                                                                            tACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGAGCGTCCATAATGTCCTccg                       >  1:299481/1‑150 (MQ=255)                                                                                                                               cTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGt                                                >  1:1085880/1‑122 (MQ=255)                                                                                                                               cTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGt                                                <  2:1085880/122‑1 (MQ=255)                                                                                                                               cTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGAGCGTCCATAATGTCCTccgccg                    <  1:173597/150‑1 (MQ=255)                                                                                                                               cTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGAGCGTCCATAATGTCCTccgccg                    <  1:390572/150‑1 (MQ=255)                                                                                                                                 gATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGAGCGTCCATAATGTCCTCCGCcggc                  <  1:1237233/150‑1 (MQ=255)                                                                                                                                      gcgATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAg                                                                          <  1:1783236/89‑1 (MQ=40)                                                                                                                                      gcgATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAg                                                                          >  2:1783236/1‑89 (MQ=40)                                                                                                                                      gcaaTCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGAGCGTCCATAATGTCCTCCGCCGGCGGACt             >  1:1626012/4‑150 (MQ=255)                                                                                                                                           ctcGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGAGCGTCCATAATGTCCTCCGCCGGCGGACTTCACg        <  1:1723788/150‑1 (MQ=255)                                                                                                                                            tcGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGAGCGTCCATAATGTCCTCCGCCGGCGGACTTCACgg       <  2:1626012/150‑1 (MQ=255)                                                                                                                                               tCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCGTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGAGCGTCCATAATGTCCTCCGCCGGCGGACTTCACGgaga    <  2:482501/150‑1 (MQ=255)                                                                                                                                                 aaCGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGAGCGTCCATAATGTCCTCCGCCGGCGGACTTCACGGAGATg  >  2:1740331/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                 CAGATAGCCGCCTTCAGCTACACGGGTTGAACCGTAGCTTGAACACAAGAAGCGCTCACGCCACGGCTCCGGTATAGCATCGTCCCGTACGATGGATATCCCAATCGAATGGGGCTCAGAGGCTACCTGATACGCGATCTCGTCAACGGTGGTGATCCGACCTGACCCAAGCCAAGCTTGTTCCTGCTGGTCAATCTCATCCAGCACCCTTAAAACACATAGTGCTCTTGGATCACCAGCGTCAAGGTGGGCGAGCGTCCATAATGTCCTCCGCCGGCGGACTTCACGGAGATG  >  NC_002947/5012142‑5012435

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.