New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5295539 =	71 (0.970)	4 (0.060)	4/228	NT	6.1%	intergenic (+22/+104)	PP_4668/PP_4669	LysR family transcriptional regulator/OmpA family protein
	?	NC_002947	5295617 =	57 (0.850)					intergenic (+100/+26)	PP_4668/PP_4669	LysR family transcriptional regulator/OmpA family protein

ATTGCCGGGAGGATTTGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGACGGTTCTCGGTAC  >  NC_002947/5295390‑5295686                                                                                                                                                      |                                                                                                                                                    aTTGCCGGGAGGATTTGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGTCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGcc                                                                                                                                                     <  2:957926/150‑1 (MQ=255)  gcatgcaggcacagaacattcagagccgtggcctgggcagcagccagccggtggcggacaaccgcaccagcgccgggcgtaccgagaaccgtcgggtgtccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacatagcc                                                                                                                                                    <  2:626381‑M1/2‑1 (MQ=255)    atgcaggcacagaacattcagagccgtggcctgggcagcagccagccggtggcggacaaccgcaccagcgccgggcgtaccgagaaccgtcgggtgtccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacatagcccc                                                                                                                                                  >  2:921240‑M1/147‑150 (MQ=255)     ccGGGAGGATTTGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGcccccc                                                                                                                                                 >  2:810080/1‑150 (MQ=255)       gggAGGATTTGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTg                                                                                                                                               >  2:1128912/1‑150 (MQ=255)         gaggaTTTGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTa                                                                                                                                             <  1:697882/150‑1 (MQ=255)          gcacagaacattcagagccgtggcctgggcagcagccagccggtggcggacaaccgcaccagcgccgggcgtaccgagaaccgtcgggtgtccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacatagCCCCCTGTAg                                                                                                                                            <  1:814267‑M1/10‑1 (MQ=255)          gcacagaacattcagagccgtggcctgggcagcagccagccggtggcggacaaccgcaccagcgccgggcgtaccgagaaccgtcgggtgtccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacatagCCCCCTGTAg                                                                                                                                            >  1:703974‑M1/141‑150 (MQ=255)          ccacagaacattcagagccgtggcctgggcagcagccagccggtggcggacaaccgcaccagcgccgggcgtaccgagaaccgtcgggtgtccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacctagCCCCCTGTAg                                                                                                                                            >  2:1931019‑M1/141‑150 (MQ=255)          aggaTTTGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTa                                                                                                                                             <  1:1360083/149‑1 (MQ=255)          aggaTTTGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTa                                                                                                                                             >  2:1360083/1‑149 (MQ=255)              tttGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGc                                                                                                                                        <  1:505755/150‑1 (MQ=255)               ttGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCg                                                                                                                                       <  2:1552926/150‑1 (MQ=255)                tGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCgg                                                                                                                                      <  2:390813/150‑1 (MQ=255)                   gcAAGTTGAAGCGCATTACCCTGCTGTGGGAGTACATCCGCGGGGTGACCGAGGCGAATGCGCAGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCt                                                                                                                                   >  1:51309/1‑150 (MQ=255)                        ttGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCtt                                                                                                                                  <  1:430149/146‑1 (MQ=255)                        ttGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCtt                                                                                                                                  >  2:430149/1‑146 (MQ=255)                        ttGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGAGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGAGTGGCCTGCGCATTTTCGAGCCCCCCTGTAGAAGCGGGCTTGccc                                                                                                                              >  1:8001/1‑150 (MQ=255)                          gAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGTGGCAAACAAGAGTGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGATCCCCCCGGTAGAGGCGGGCTTGCCcgc                                                                                                                            >  1:821490/1‑150 (MQ=255)                                  ctgggcagcagccagccggtggcggacaaccgcaccagcgccgggcgtaccgagaaccgtcgggtgtccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacatagCCCCCTGt                                                                                                                                              <  1:196786‑M1/8‑1 (MQ=255)                                  ctgggcagcagccagccggtggcggacaaccgcaccagcgccgggcgtaccgagaaccgtcgggtgtccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacatagCCCCCTGt                                                                                                                                              >  2:196786‑M1/117‑124 (MQ=255)                                   tACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCgg                                                                                                                   <  1:595614/150‑1 (MQ=255)                                    aCCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGCGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCTCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGc                                                                                                                  <  2:711084/150‑1 (MQ=255)                                      ccTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGa                                                                                                                >  2:885168/1‑150 (MQ=255)                                       ctgctgTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATTGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGaa                                                                                                               <  1:1634232/150‑1 (MQ=255)                                       ctgctgTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGaa                                                                                                               <  1:1128912/150‑1 (MQ=255)                                         gcagccagccggtggcggacaaccgcaccagcgccgggcgtaccgagaaccgtcgggtgtccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacatagCCCCCTGTAg                                                                                                                                            >  1:1648580‑M1/110‑119 (MQ=255)                                         gcagccagccggtggcggacaaccgcaccagcgccgggcgtaccgagaaccgtcgggtgtccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacatagCCCCCTGTAg                                                                                                                                            <  2:1648580‑M1/10‑1 (MQ=255)                                           tgtgGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCg                                                                                                           <  1:885168/150‑1 (MQ=255)                                           tgtgGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCg                                                                                                           >  1:438971/1‑150 (MQ=255)                                             tgGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCTCGAACACCGGCGAAGCCGGt                                                                                                         <  1:242614/150‑1 (MQ=255)                                               ggATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGAGGGATGGGCCTGCGGATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGc                                                                                                       <  2:87470/150‑1 (MQ=255)                                               ggATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGc                                                                                                       <  2:1152332/150‑1 (MQ=255)                                                     cATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCggg                                                                                                                                     >  1:12917/1‑114 (MQ=255)                                                     cATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCggg                                                                                                                                     <  2:12917/114‑1 (MQ=255)                                                            ggggTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGtt                                                                                          <  2:717676/150‑1 (MQ=255)                                                             gggTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATCCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTg                                                                                         <  1:1698098/150‑1 (MQ=255)                                                               gtcaCCGAGTCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGCTACAACCCGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGcc                                                                                       <  2:51309/147‑1 (MQ=37)                                                                 gACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCcg                                                                                     >  2:1501767/1‑150 (MQ=255)                                                                      aGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCt                                                                                >  2:99498/1‑150 (MQ=255)                                                                          gAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAg                                                                            >  1:357152/1‑150 (MQ=255)                                                                           aaTGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAgg                                                                           <  1:1501767/150‑1 (MQ=255)                                                                             tGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGACCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAgggg                                                                         >  2:173526/1‑150 (MQ=255)                                                                                          ccgtcgggtgtccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacatagCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAggg                                                                          <  1:103080‑M1/76‑1 (MQ=255)                                                                                          ccgtcgggtgtccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacatagCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAggg                                                                          >  2:103080‑M1/61‑136 (MQ=255)                                                                                            ggggCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAg                                                                                                                                         >  2:1658/1‑71 (MQ=255)                                                                                            ggggCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAg                                                                                                                                         <  1:1658/71‑1 (MQ=255)                                                                                             tggCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCg                                                         <  2:821490/149‑1 (MQ=255)                                                                                             gggCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGc                                                                                                                  <  2:754121/93‑1 (MQ=255)                                                                                             gggCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGc                                                                                                                  >  1:754121/1‑93 (MQ=255)                                                                                             gggCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCg                                                         >  2:1742202/1‑150 (MQ=255)                                                                                              ggCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGTCCTGCGCATTGCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGa                                                        >  1:42447/1‑150 (MQ=255)                                                                                               gCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAg                                                       >  1:311788/1‑150 (MQ=255)                                                                                                      cgcgAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGcgac                                                >  2:783013/1‑150 (MQ=255)                                                                                                           gaTGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGtt                                                                                          >  2:1469247/1‑103 (MQ=255)                                                                                                           gaTGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGtt                                                                                          <  1:1469247/103‑1 (MQ=255)                                                                                                                gcTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAgg                                      >  1:411395/1‑150 (MQ=255)                                                                                                                 cTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCa                                                                                                     <  1:262682/86‑1 (MQ=255)                                                                                                                 cTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCa                                                                                                     >  2:262682/1‑86 (MQ=255)                                                                                                                  tttGCCCAGCACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGAc                                    <  1:783013/150‑1 (MQ=255)                                                                                                                  gtcctactgatcgtcgccgctcgggctgtcacatagCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAgg                                                                           >  1:983930‑M1/37‑111 (MQ=255)                                                                                                                  gtcctactgatcgtcgccgctcgggctgtcacatagCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAgg                                                                           <  2:983930‑M1/75‑1 (MQ=255)                                                                                                                       ccAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAgc                                                      >  1:111118/1‑127 (MQ=255)                                                                                                                       ccAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAgc                                                      <  2:111118/127‑1 (MQ=255)                                                                                                                        cAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGccc                                                                                      >  1:604413/1‑94 (MQ=255)                                                                                                                        cAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGccc                                                                                      <  2:604413/94‑1 (MQ=255)                                                                                                                         aGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCa                             <  1:1742202/150‑1 (MQ=255)                                                                                                                              tGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATg                        >  1:385413/1‑150 (MQ=255)                                                                                                                              tGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATg                        <  2:411395/150‑1 (MQ=255)                                                                                                                               gATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATgg                       <  2:1446914/150‑1 (MQ=255)                                                                                                                                aTGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTa                                        >  1:684729/1‑132 (MQ=255)                                                                                                                                aTGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTa                                        <  2:684729/132‑1 (MQ=255)                                                                                                                                  gggCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGaca                    >  1:635282/1‑150 (MQ=255)                                                                                                                                   ggCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACGCCGCGTTGCCCGCGCCTACAGGGGGCTCTGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGacac                   <  1:1012314/150‑1 (MQ=255)                                                                                                                                   ggCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACAATCAGTAGGACGCTACCACGATGGacac                   <  2:311788/150‑1 (MQ=255)                                                                                                                                     ccTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACAccc                 >  2:57227/1‑150 (MQ=255)                                                                                                                                      cTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCg                >  1:164893/1‑150 (MQ=255)                                                                                                                                       tGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCa                                                                                                     >  2:897424/1‑64 (MQ=255)                                                                                                                                       tGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCa                                                                                                     <  1:897424/64‑1 (MQ=255)                                                                                                                                       tGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGa               >  1:626381/1‑150 (MQ=255)                                                                                                                                         cgcATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGACg             <  1:57227/150‑1 (MQ=255)                                                                                                                                          gcATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGCTc                                            <  1:1933752/118‑1 (MQ=255)                                                                                                                                          gcATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATc                                            >  2:1933752/1‑118 (MQ=255)                                                                                                                                          gcATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGACgg            >  2:27655/1‑150 (MQ=255)                                                                                                                                           cATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGACGGt           >  2:1895620/1‑150 (MQ=255)                                                                                                                                            aTTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGACGGtt          >  1:921176/1‑150 (MQ=255)                                                                                                                                                 cGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCTGCGACGATCAGTAGGACGCTACCACGATGGACACCCGACGGTTCTCgg     <  2:470408/150‑1 (MQ=255)                                                                                                                                                   aGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGACGGTTCTCGGTa   <  1:1895620/150‑1 (MQ=255)                                                                                                                                                    gCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGACGGTTCTCGGTAc  <  1:27655/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                    ATTGCCGGGAGGATTTGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGACGGTTCTCGGTAC  >  NC_002947/5295390‑5295686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.