New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5336775	71 (0.970)	4 (0.060)	4/240	NT	5.4%	coding (177/1443 nt)	PP_4696	nitrogen regulation protein NR(I)
	?	NC_002947	= 5336801	72 (1.020)					coding (203/1443 nt)	PP_4696	nitrogen regulation protein NR(I)

CATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATGCTGCAGGCA  >  NC_002947/5336631‑5336922                                                                                                                                                 |                                                                                                                                                     catcatCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCAc                                                                                                                                                 >  1:677826/1‑150 (MQ=255) catcatCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCAc                                                                                                                                                 >  2:207041/1‑150 (MQ=255) catcatCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGAACGGAAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGCCATGCGCCTGCCCGGCGCGCCCGGCAc                                                                                                                                                 >  1:1392753/1‑150 (MQ=255)   tcatcCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCg                                                                                                                                               >  2:344264/1‑150 (MQ=255)         gCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGATC‑TGa                                                                                                                                        <  1:1441857/150‑1 (MQ=255)         gCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGa                                                                                                                                        <  1:563521/150‑1 (MQ=255)         gCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGa                                                                                                                                        >  2:1061830/1‑150 (MQ=255)         gCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGa                                                                                                                                        <  1:1310983/150‑1 (MQ=255)               cccTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCtggccgagcttgatcagct                                                                                                                                   >  2:1438944‑M1/1‑131 (MQ=255)                  tGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCg                                                                                                                               <  1:1061830/150‑1 (MQ=255)                         ccTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAggg                                                                                                                        >  1:1172969‑M2/1‑147 (MQ=255)                         ccTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAggg                                                                                                                        >  1:1256833‑M2/1‑147 (MQ=255)                          cTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAgggc                                                                                                                       <  1:1315103‑M2/150‑5 (MQ=255)                              ttGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCtggccgagcttgatcagctcggtgccgggcgcgc                                                                                                                    <  1:1438944‑M1/150‑35 (MQ=255)                              ttGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCAccc                                                                                                                   >  2:747503/1‑150 (MQ=255)                               tGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTTGATC‑AGCTCggtg                                                                                                                            >  1:297503/1‑138 (MQ=255)                               tGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTTGATC‑AGCTCggtg                                                                                                                            <  2:297503/140‑3 (MQ=255)                               tGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCAcccc                                                                                                                  >  2:1310099/1‑150 (MQ=255)                                     gAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCt                                                                                                            >  2:202432/1‑150 (MQ=255)                                        ccAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGAt                                                                                                         >  2:157915/1‑150 (MQ=255)                                          ggTACGAGGTCAGCGAGGCCGGCTCGGGGCAGGAAGCCCAGGAGCGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCa                                                                                                       <  2:677826/149‑1 (MQ=255)                                          aGTACCAAGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGATTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATct                                                                                                       <  2:196212/150‑2 (MQ=255)                                           gTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCAt                                                                                                      >  2:1900195/1‑150 (MQ=255)                                            tACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATg                                                                                                     >  2:410793/1‑150 (MQ=255)                                             aCCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTgatgatgctca                                                                                                    >  2:1866070/1‑145 (MQ=255)                                              ccAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑t                                                                                                                                          >  2:1063233/1‑111 (MQ=255)                                              ccAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑t                                                                                                                                          <  1:1063233/111‑1 (MQ=255)                                              ccAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCAc                                                                                                                     <  2:616852/132‑1 (MQ=255)                                              ccAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCAc                                                                                                                     >  1:616852/1‑132 (MQ=255)                                               cAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGAcc                                                                                                  >  1:358226/1‑150 (MQ=255)                                                aGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCa                                                                                                 <  1:1420790/150‑1 (MQ=255)                                                aGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCa                                                                                                 <  2:1273180/150‑1 (MQ=255)                                                  gTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGt                                                                                               >  1:1470977/1‑150 (MQ=255)                                                  gTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGt                                                                                               <  2:840355/150‑1 (MQ=255)                                                   tCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGCTGCTGATCATGACCAGtt                                                                                              <  1:1310099/150‑1 (MQ=255)                                                        gAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCTGCACCGAGC‑TGATCAAGCTCGGCCAGGTCACCCCGGTGCTGATCATGACCAGTTACGcc                                                                                         >  1:1410283/1‑150 (MQ=255)                                                           gCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGc                                                                                      <  1:344264/150‑1 (MQ=255)                                                             cGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCt                                                                                    <  2:1015670/150‑1 (MQ=255)                                                                         ggAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGt                                                                        <  1:747503/150‑1 (MQ=255)                                                                         ggAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGt                                                                        <  2:34386/150‑1 (MQ=255)                                                                         ggAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGt                                                                        <  2:1470977/150‑1 (MQ=255)                                                                         ggAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGt                                                                        <  1:1624146/150‑1 (MQ=255)                                                                          gAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTg                                                                       <  1:518477/150‑1 (MQ=255)                                                                          gAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTg                                                                       <  1:298178/150‑1 (MQ=255)                                                                               ccAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTc                                                                  >  1:554842/1‑150 (MQ=255)                                                                                cAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGTGCCTGCCCGGCGCGCCCGACACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCg                                                                 >  2:143872/1‑150 (MQ=255)                                                                                 aGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGa                                                                <  2:554842/150‑1 (MQ=255)                                                                                  ggAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGAt                                                               <  1:410793/150‑1 (MQ=255)                                                                                   gAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGa                                                                <  1:1481881/148‑1 (MQ=255)                                                                                   gAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGa                                                                >  2:1481881/1‑148 (MQ=255)                                                                                      cGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGaaa                                                           <  1:207041/150‑1 (MQ=255)                                                                                       gCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGaaaa                                                          >  1:1264136/1‑150 (MQ=255)                                                                                         ttCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCtggccgagcttgatcagctcggtgccgg                                                                                                                          <  1:1121946‑M1/85‑29 (MQ=255)                                                                                         ttCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCtggccgagcttgatcagctcggtgccgg                                                                                                                          >  2:1121946‑M1/1‑57 (MQ=255)                                                                                         ttCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTg                                                                       <  1:521434/135‑1 (MQ=255)                                                                                         ttCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTg                                                                       >  2:521434/1‑135 (MQ=255)                                                                                               aTTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGcgcg                                                  <  1:1866070/150‑1 (MQ=255)                                                                                                   ccACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTgg                                              >  2:1589854/1‑150 (MQ=255)                                                                                                    cACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGa                                             <  2:358226/150‑1 (MQ=255)                                                                                                     aCTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGAc                                            <  2:1162610/150‑1 (MQ=255)                                                                                                     aCTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGAc                                            <  1:202432/150‑1 (MQ=255)                                                                                                       tttCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGa                                                                     <  1:1580712/123‑1 (MQ=255)                                                                                                       tttCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGa                                                                     >  2:1580712/1‑123 (MQ=255)                                                                                                       tttCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTa                                          >  1:909424/1‑150 (MQ=255)                                                                                                            aCCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACAt                                       >  2:346048/1‑148 (MQ=255)                                                                                                            aCCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACAt                                       <  1:346048/148‑1 (MQ=255)                                                                                                                cATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCaa                                 <  1:1900195/150‑1 (MQ=255)                                                                                                                 aTCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAg                                >  1:1827537/1‑150 (MQ=255)                                                                                                                  tCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGCTCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGc                               >  1:825484/1‑150 (MQ=255)                                                                                                                     tCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATggg                                                      <  2:132399/124‑1 (MQ=255)                                                                                                                     tCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATggg                                                      >  1:132399/1‑124 (MQ=255)                                                                                                                     tCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGTGCGCGGTGGACTACATCGCCAAGCCCt                            <  1:1598988/150‑1 (MQ=255)                                                                                                                     tCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCt                            <  2:1820378/150‑1 (MQ=255)                                                                                                                           aCCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGAcc                      >  1:421241/1‑150 (MQ=255)                                                                                                                            ccTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCa                     >  1:121834/1‑150 (MQ=255)                                                                                                                              tGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATGATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGGGGTGGACTACATCGCCAAGCCCTTCGACCacg                   >  1:113782/1‑150 (MQ=255)                                                                                                                               gcgcCTGCCCGGCGCGCCCGGTACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCacga                  >  2:1882037/1‑150 (MQ=255)                                                                                                                                  ccTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCAcgacga               <  2:121834/150‑1 (MQ=255)                                                                                                                                     gCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGAt            <  2:1827537/150‑1 (MQ=255)                                                                                                                                      cccGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGAtg           >  2:1673291/1‑150 (MQ=255)                                                                                                                                       ccGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGAtgc          >  1:1030453/1‑150 (MQ=255)                                                                                                                                          gcgcgcCCGGCACCGAGC‑TGATCAAGCTCGGCCAgggcgcgccgggcaggcgcaggtcgctgacgatgaggtcgaaagtggcaatgctgaagcgttcctgggcttcctgcaccgagccggcctcgctgacctggtactggttccgctcaa       <  1:1438944‑M2/150‑117 (MQ=255)                                                                                                                                              gcCCtggccgagcttgatcagctcggtgccgggcgcgccgggcaggcgcaggtcgctgacgatgaggtcgaaagtggcaatgctgaagcgttcctgggcttcctgcaccgagccggcctcgctgacctggtactggttccgctcaagcag    <  1:1315103‑M1/150‑147 (MQ=255)                                                                                                                                               ccctggccgagcttgatcagctcggtgccgggcgcgccgggcaggcgcaggtcgctgacgatgaggtcgaaagtggcaatgctgaagcgttcctgggcttcctgcaccgagccggcctcgctgacctggtactggttccgctcaagcagg   >  1:1256833‑M1/1‑3 (MQ=255)                                                                                                                                               ccctggccgagcttgatcagctcggtgccgggcgcgccgggcaggcgcaggtcgctgacgatgaggtcgaaagtggcaatgctgaagcgttcctgggcttcctgcaccgagccggcctcgctgacctggtactggttccgctcaagcagg   >  1:1172969‑M1/1‑3 (MQ=255)                                                                                                                                               cccGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATGCTgcaggca  <  2:1030453/150‑1 (MQ=255)                                                                                                                                                ccGGCACCGAGC‑TGATCAAGCTCGGCCAgggcgcgccgggcaggcgcaggtcgctgacgatgaggtcgaaagtggcaatgctgaa                                                                  >  2:1121946‑M2/1‑28 (MQ=255)                                                                                                                                                ccGGCACCGAGC‑TGATCAAGCTCGGCCAgggcgcgccgggcaggcgcaggtcgctgacgatgaggtcgaaagtggcaatgctgaa                                                                  <  1:1121946‑M2/85‑58 (MQ=255)                                                                                                                                                 |                                                                                                                                                     CATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATGCTGCAGGCA  >  NC_002947/5336631‑5336922

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.