New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 544154979 (1.080)8 (0.110) 6/238 NT 9.6% coding (1083/1653 nt) PP_4780 acyl‑CoA dehydrogenase
?NC_002947 = 5441562 75 (1.070)coding (1070/1653 nt) PP_4780 acyl‑CoA dehydrogenase

Only 100 of 114 total aligned reads displayed.

ACATAACCCGCGCCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCT  >  NC_002947/5441400‑5441698
                                                                                                                                                     |                                                                                                                                                     
acaTAACCCGCGCCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGC                                                                                                                                                       >  2:1767700‑M1/1‑150 (MQ=255)
acaTAACCCGCGCCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGC                                                                                                                                                       >  1:1325776‑M1/1‑150 (MQ=255)
  aTAACCCGCGCCACCCAGGCATTCGGCGGCCTCGTTGCTCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCaa                                                                                                                                                     <  1:1767700/150‑1 (MQ=255)
  aTAACCCGCGCCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCaa                                                                                                                                                     <  2:640754/150‑1 (MQ=255)
      cccGCGCCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTc                                                                                                                                                 >  1:662723/1‑150 (MQ=255)
          cgcCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAggg                                                                                                                                             >  1:696433/1‑150 (MQ=255)
              aCCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAg                                                                                                                                         <  1:1219815‑M2/150‑2 (MQ=255)
                 cAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAgcgc                                                                                                                                      <  1:1838993‑M2/150‑5 (MQ=255)
                   ggCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAgcgcat                                                                                                                                    <  1:1530169‑M2/150‑7 (MQ=255)
                    gCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCAATGCGCAAGCTCAGGGCGa                                                                                                                                          <  1:1612484/143‑1 (MQ=255)
                    gCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCAATGCGCAAGCTCAGGGCGa                                                                                                                                          >  2:1612484/1‑143 (MQ=255)
                    gCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTACAGCGCACGGACCATGCGCgcgcgcggagctggcccatg                                                                                                                                   <  2:1574151‑M1/150‑21 (MQ=255)
                     cATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAgcgcatgg                                                                                                                                  >  2:1530169‑M2/1‑142 (MQ=255)
                      aTTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCtcgccctgagcttgcgcatggg                                                                                                                                 <  2:305505‑M1/150‑23 (MQ=255)
                       ttCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCtcgccctgagcttgcgcatggg                                                                                                                                 <  1:344751‑M1/149‑23 (MQ=255)
                       ttCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCtcgccctgagcttgcgcatggg                                                                                                                                 >  2:344751‑M1/1‑127 (MQ=255)
                       ttCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTc                                                                                                                                <  1:356794/150‑1 (MQ=255)
                       ttCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGACCTTCGGCAAGCTCAGGGCGAGCGCAGCCTc                                                                                                                                <  1:543284/150‑1 (MQ=255)
                         cggcggCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGc                                                                                                                              <  1:1022371/150‑1 (MQ=255)
                               ccTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGACGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGCGCGCCACCTCGCTTTccc                                                                                                                        >  2:857509/1‑149 (MQ=255)
                                cTCGTTGCTCCTGGCCGGCGTACGTTTGCAGACCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGAGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCCTGCGCAAGTGGAGCGCGCGCGCGGCTTCGCTTTCCAg                                                                                                                       <  2:21753/150‑1 (MQ=255)
                                cTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAg                                                                                                                       >  2:1051914/1‑150 (MQ=255)
                                 tCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAgg                                                                                                                      <  1:1361253/150‑1 (MQ=255)
                                 tCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAgg                                                                                                                      <  1:763253/150‑1 (MQ=255)
                                   gTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAgcgcatgg                                                                                                                                  <  1:779414‑M2/136‑9 (MQ=255)
                                   gTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAgcgcatgg                                                                                                                                  >  2:779414‑M2/1‑128 (MQ=255)
                                       aTCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAgg                                                                                                                >  1:734963/1‑150 (MQ=255)
                                           tGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCgg                                                                                                            <  1:1606748/150‑1 (MQ=255)
                                              ccGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCa                                                                                                         <  1:914693/150‑1 (MQ=255)
                                                       gTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTcc                                                                                                <  1:1037913/150‑2 (MQ=255)
                                                         ttGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGc                                                                                              <  2:1695884/150‑1 (MQ=255)
                                                         ttGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGc                                                                                              >  1:1773551/1‑150 (MQ=255)
                                                           gCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCAt                                                                                            >  2:1903300/1‑150 (MQ=255)
                                                            cAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATc                                                                                           <  1:1903300/150‑1 (MQ=255)
                                                             aGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGt                                                                                                               >  1:1812585/1‑129 (MQ=255)
                                                             aGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGt                                                                                                               <  2:1812585/129‑1 (MQ=255)
                                                                 ccAGTACTTGCCCACCGCCGTGACCAGCCGTGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATgg                                                                                      >  2:932/1‑150 (MQ=255)
                                                                   aGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGgct                                                                                    >  1:602376/1‑150 (MQ=255)
                                                                   aGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGgct                                                                                    >  1:1106348/1‑150 (MQ=255)
                                                                     tACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAgg                                                                                                                      >  1:1582381/1‑114 (MQ=255)
                                                                     tACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAgg                                                                                                                      <  2:1582381/114‑1 (MQ=255)
                                                                     tACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGgctgc                                                                                  <  1:749263/150‑1 (MQ=255)
                                                                       cTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTc                                                                                <  2:696433/150‑1 (MQ=255)
                                                                       cTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTc                                                                                <  2:734963/150‑1 (MQ=255)
                                                                        ttGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCg                                                                               >  1:17424/1‑150 (MQ=255)
                                                                          gCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCCGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGtt                                                                             <  2:1827763/150‑1 (MQ=255)
                                                                          gCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGtt                                                                             >  1:588782/1‑150 (MQ=255)
                                                                          gCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGtt                                                                             <  2:1838993/150‑1 (MQ=255)
                                                                            ccACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGt                                                                                                               <  2:973887/114‑1 (MQ=255)
                                                                            ccACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGt                                                                                                               >  1:973887/1‑114 (MQ=255)
                                                                            ccACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCa                                                                           <  2:1106348/150‑1 (MQ=255)
                                                                             cACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCtcgccctgagcttgcgcatgggc                                                                                                                                <  1:522178‑M1/96‑24 (MQ=255)
                                                                             cACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCtcgccctgagcttgcgcatgggc                                                                                                                                >  2:522178‑M1/1‑73 (MQ=255)
                                                                             cACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGa                                                                                                                                          <  2:1738174/86‑1 (MQ=255)
                                                                              aCCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCtcgccctgagcttgcgcatg                                                                                                                                   >  1:1710282‑M1/1‑72 (MQ=255)
                                                                              aCCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCtcgccctgagcttgcgcatg                                                                                                                                   <  2:1710282‑M1/92‑21 (MQ=255)
                                                                              aCCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGc                                                                         >  1:1932075/1‑150 (MQ=255)
                                                                                cgccgTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCAc                                                                       <  1:480911/150‑1 (MQ=255)
                                                                                  ccgTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCa                                                                                                         <  2:1227885/114‑1 (MQ=255)
                                                                                  ccgTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCa                                                                                                         >  1:1227885/1‑114 (MQ=255)
                                                                                  ccgTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCAccc                                                                     <  1:1858123/150‑1 (MQ=255)
                                                                                        ccAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACccgcccgc                                                               >  1:226495/1‑150 (MQ=255)
                                                                                          aGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCccgccg                                                             >  1:1568901/1‑150 (MQ=255)
                                                                                           gCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGcc                                                                                                                                  <  1:171299/80‑1 (MQ=255)
                                                                                           gCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCAcccgc                                                                   <  2:1117028/143‑1 (MQ=255)
                                                                                           gCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCAcccgc                                                                   >  1:1117028/1‑143 (MQ=255)
                                                                                                gCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAg                                                                                                                                               >  2:1088110/1‑62 (MQ=255)
                                                                                                gCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAg                                                                                                                                               <  1:1088110/62‑1 (MQ=255)
                                                                                                  aaaaTGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCg                                                     <  2:1219815/150‑1 (MQ=255)
                                                                                                            tGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCaa                                           >  2:82548/1‑150 (MQ=255)
                                                                                                                gCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCaa                                           <  2:764111/146‑1 (MQ=255)
                                                                                                                gCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCaa                                           >  1:764111/1‑146 (MQ=255)
                                                                                                                  gggTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAAtggtgg                                     <  1:1111522/150‑1 (MQ=255)
                                                                                                                  gggTCGCCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAAtggtgg                                     <  1:1111487/150‑1 (MQ=255)
                                                                                                                   ggTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTggg                                    >  2:770112/1‑150 (MQ=255)
                                                                                                                    gtcgtcCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGgc                                   <  1:395775/150‑1 (MQ=255)
                                                                                                                        tcCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATgg                                                                                      <  2:1174730/95‑1 (MQ=255)
                                                                                                                        tcCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATgg                                                                                      >  1:1174730/1‑95 (MQ=255)
                                                                                                                                 tCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAAc                      <  1:932/150‑1 (MQ=255)
                                                                                                                                 tCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAAc                      >  2:1621391/1‑150 (MQ=255)
                                                                                                                                     gcgcCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCt                  <  2:17424/150‑1 (MQ=255)
                                                                                                                                        ccTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGgc               <  2:1568901/150‑1 (MQ=255)
                                                                                                                                            gCCCATGCGCAAGCTCAGGGCGAgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtg                                                                 <  1:522178‑M2/96‑74 (MQ=255)
                                                                                                                                            gCCCATGCGCAAGCTCAGGGCGAgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtg                                                                 >  2:522178‑M2/1‑23 (MQ=255)
                                                                                                                                             cccATGCGCAAGCTCAGGGCGAgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccggccatgatcaacgaggccgccgaat          <  2:305505‑M2/150‑129 (MQ=255)
                                                                                                                                             cccATGCGCAAGCTCAGGGCGAgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccggccatgatcaacgaggccgccgaa           <  1:344751‑M2/149‑128 (MQ=255)
                                                                                                                                             cccATGCGCAAGCTCAGGGCGAgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccggccatgatcaacgaggccgccgaa           >  2:344751‑M2/1‑22 (MQ=255)
                                                                                                                                             cccATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATc          >  2:724038/1‑150 (MQ=255)
                                                                                                                                              ccATGCGCtcgccctgagcttgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccggccatgatcaacgaggccgccgaatg         >  2:1530169‑M1/1‑8 (MQ=255)
                                                                                                                                              ccATGCGCtcgccctgagcttgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccggccatgatcaac                       <  1:779414‑M1/136‑129 (MQ=255)
                                                                                                                                              ccATGCGCtcgccctgagcttgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccggccatgatcaac                       >  2:779414‑M1/1‑8 (MQ=255)
                                                                                                                                              ccATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCa         >  2:1489717/1‑150 (MQ=255)
                                                                                                                                               cATGCGCAAGCTCAGGGCGAgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggt                                                                  <  2:1710282‑M2/92‑73 (MQ=255)
                                                                                                                                               cATGCGCAAGCTCAGGGCGAgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggt                                                                  >  1:1710282‑M2/1‑20 (MQ=255)
                                                                                                                                                aTGCGCtcgccctgagcttgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccggccatgatcaacgaggccgccgaatgcc       <  1:1530169‑M1/150‑145 (MQ=255)
                                                                                                                                                aTGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGt       >  2:1850593/1‑150 (MQ=255)
                                                                                                                                                  gcgctcgccctgagcttgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccggccatgatcaacgaggccgccgaatgcctg     <  1:1838993‑M1/150‑147 (MQ=255)
                                                                                                                                                    gcAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCACTGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTgcgc   >  2:1706979/1‑150 (MQ=255)
                                                                                                                                                    gcAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTgcgc   <  2:1888832/150‑1 (MQ=255)
                                                                                                                                                     ctcgccctgagcttgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccggccatgatcaacgaggccgccgaatgcctgggt  <  1:1219815‑M1/150‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ACATAACCCGCGCCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCT  >  NC_002947/5441400‑5441698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.