New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5681397 =63 (0.860)3 (0.050) 3/202 NT 5.6% intergenic (‑63/+145) PP_4986/PP_4987 hemolysin III family channel protein/putative Chemotaxis protein
?NC_002947 5681512 = 50 (0.840)intergenic (‑178/+30) PP_4986/PP_4987 hemolysin III family channel protein/putative Chemotaxis protein

GGCCACGATCAGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAAC  >  NC_002947/5681248‑5681546
                                                                                                                                                     |                                                                                                                                                     
ggCCACGATCAGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTtg                                                                                                                                                       >  1:1928043/1‑150 (MQ=255)
  ccACGATCAGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTtgtg                                                                                                                                                     <  1:1158850/150‑1 (MQ=255)
  ccACGATCAGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTCtgtg                                                                                                                                                     <  1:1094842/150‑1 (MQ=255)
   tgggcaggttggagctggcagcggtgcaggtgggtgagcaggtggcgcgggtaccggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTgg                                                                                                                                                    <  2:653710‑M1/4‑1 (MQ=255)
    gggcaggttggagctggcagcggtgcaggtgggtgagcaggtggcgcgggtaccggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTggg                                                                                                                                                   <  1:405910‑M1/5‑1 (MQ=255)
    gggcaggttggagctggcagcggtgcaggtgggtgagcaggtggcgcgggtaccggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTggg                                                                                                                                                   >  2:1094716‑M1/146‑150 (MQ=255)
    aCGATCAGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTggg                                                                                                                                                   >  2:521887/1‑150 (MQ=255)
     ggcaggttggagctggcagcggtgcaggtgggtgagcaggtggcgcgggtaccggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGa                                                                                                                                                  <  1:666094‑M1/6‑1 (MQ=255)
      gcaggttggagctggcagcggtgcaggtgggtgagcaggtggcgcgggtaccggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTgg                                                                                                                                                    <  2:1134006‑M1/4‑1 (MQ=255)
      gcaggttggagctggcagcggtgcaggtgggtgagcaggtggcgcgggtaccggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTgg                                                                                                                                                    >  1:1134006‑M1/144‑147 (MQ=255)
      gcaggttggagctggcagcggtgcaggtgggtgagcaggtggcgcgggtaccggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAg                                                                                                                                                 <  2:1024809‑M1/7‑1 (MQ=255)
      gATCAGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAg                                                                                                                                                 >  2:1748881/1‑150 (MQ=255)
         gggtggagctgggagcggtgcaggtgggtgagcaggtggcgcgggtcccggccctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgcggcgcagggcctggtggtcgggaGTGGTAGCgg                                                                                                                                              >  2:384057‑M1/141‑150 (MQ=255)
          aGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGc                                                                                                                                             <  2:33072/150‑1 (MQ=255)
           ttggagctggcagcggtgcaggtgggtgagcaggtggcgcgggtaccggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGcc                                                                                                                                            >  2:1735605‑M1/139‑150 (MQ=255)
           ttggagctggcagcggtgcaggtgggtgagcaggtggcgcgggtaccggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgcgaggcgcagggcctggtggtctggaGTGGGAGCGGcc                                                                                                                                            >  1:1572182‑M1/139‑150 (MQ=255)
            tggagctggcagcggtgcaggtgggtgagcaggtggcgcgggtaccggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCt                                                                                                                                           >  1:1836355‑M1/138‑150 (MQ=255)
            ccAGATGGCACCGATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCt                                                                                                                                           <  2:1655064/150‑1 (MQ=255)
            ccAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCt                                                                                                                                           >  2:1332132/1‑150 (MQ=255)
             ggagctggcagcggtgcaggtgggtgagcaggtggcgcgggtaccggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCtt                                                                                                                                          >  1:1074910‑M1/137‑150 (MQ=255)
             cAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCtt                                                                                                                                          <  1:1734192/150‑1 (MQ=255)
             cAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCtt                                                                                                                                          <  1:635252/150‑1 (MQ=255)
              aGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTCCCTGTTGTCATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTtg                                                                                                                                         <  1:1040473/150‑1 (MQ=255)
                  ggCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGCGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTc                                                                                                                                     >  1:512400/1‑150 (MQ=255)
                    gcagcggtgcaggtgggtgagcaggtggcgcgggtaccggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCTTGTGTcgc                                                                                                                                   >  2:995442‑M1/130‑150 (MQ=255)
                         aTAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAg                                                                                                                              <  1:1251828/150‑1 (MQ=255)
                         aTAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAg                                                                                                                              <  2:1113254/150‑1 (MQ=255)
                          tAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAgg                                                                                                                             <  1:1748881/150‑1 (MQ=255)
                             cagcGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGgc                                                                                                                          <  2:783488/150‑1 (MQ=255)
                              agcGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGgcg                                                                                                                         >  2:666315/1‑150 (MQ=255)
                               gcGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTGTCGAAAGGGgcgc                                                                                                                        >  2:147569/1‑150 (MQ=255)
                                       ggCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCggg                                                                                                                >  2:1568213/1‑149 (MQ=255)
                                       ggCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGc                                                                                                                <  1:521887/150‑1 (MQ=255)
                                            gtggcgcgggtaccggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTgg                                                                                                                                                    <  2:1534635‑M1/4‑1 (MQ=255)
                                            gtggcgcgggtaccggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTgg                                                                                                                                                    >  1:1534635‑M1/106‑109 (MQ=255)
                                                 aGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCttt                                                                                                      <  2:31231/150‑1 (MQ=255)
                                                     gtaccggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCTTGTGTcgc                                                                                                                                   >  2:96752‑M1/97‑117 (MQ=255)
                                                     gtaccggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCTTGTGTcgc                                                                                                                                   <  1:96752‑M1/21‑1 (MQ=255)
                                                       gTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCCAAAGGGGCGCGAAGCGTCCCCAGGCTTTCATTGc                                                                                                <  2:512400/150‑1 (MQ=255)
                                                          ggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCt                                                                                                                                           <  1:592809‑M1/13‑1 (MQ=255)
                                                          ggacctggtcgcattggaaaggctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCt                                                                                                                                           >  2:592809‑M1/92‑104 (MQ=255)
                                                           aGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGc                                                                                                         <  2:411867/137‑1 (MQ=255)
                                                           aGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGc                                                                                                         >  1:411867/1‑137 (MQ=255)
                                                           aGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACt                                                                                            >  2:1479899/1‑150 (MQ=255)
                                                               gTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTtgt                                                                                                                                                      <  1:1837505/88‑1 (MQ=255)
                                                               gTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTtgt                                                                                                                                                      >  2:1837505/1‑88 (MQ=255)
                                                                    aGCTTTCACCCTAATACATGCAACCGCAGTCCTCCTAAGGTGCGCTCGATTCCTGTTGTGATGCTGGTGGCTTAGTTTTTTGCGTGAGCGGCCTTGTCTCGCGAAAGGGGCGCGAAGCGCCCCCAGGCTTTCATTGCCACTGCATGAAcc                                                                                   <  2:355794/150‑1 (MQ=25)
                                                                         tCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCgg                                                                              <  2:1317192/150‑1 (MQ=255)
                                                                               gctggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGgctgc                                                                        <  2:1563353‑M1/80‑1 (MQ=255)
                                                                                aaTACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGgttgct                                                                       <  1:1479899/150‑1 (MQ=255)
                                                                                     aTGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCATGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCACCAGGCTTTTATTGAAGCTGGATGAACAGCAGGGGTTGTTGCGCa                                                                  >  1:890985/1‑150 (MQ=37)
                                                                                      tGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAg                                                                 >  2:680888/1‑150 (MQ=255)
                                                                                         aaaCACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCCCGTGCAGTACCACATGGGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCGGCTTCGCAGccc                                                              >  1:629256/1‑150 (MQ=255)
                                                                                           acacAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTTATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTa                                                            >  1:638513/1‑150 (MQ=255)
                                                                                           acacAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGCCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTa                                                            >  1:918621/1‑150 (MQ=255)
                                                                                             acaGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTcgc                                                                                                                                   >  2:1045864/1‑77 (MQ=255)
                                                                                             acaGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTcgc                                                                                                                                   <  1:1045864/77‑1 (MQ=255)
                                                                                             acaGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATc                                                          >  1:361918/1‑150 (MQ=255)
                                                                                             acaGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATc                                                          >  1:1336632/1‑150 (MQ=255)
                                                                                              ggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATcg                                                         >  1:1024809‑M1/56‑150 (MQ=255)
                                                                                               gatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATcgc                                                        >  1:1563353‑M1/55‑150 (MQ=255)
                                                                                                gACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCtt                                                                                                                                          <  2:620196/67‑1 (MQ=255)
                                                                                                gACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCtt                                                                                                                                          >  1:620196/1‑67 (MQ=255)
                                                                                                 aCCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGgcgc                                                                                                                        <  2:1842590/84‑1 (MQ=255)
                                                                                                 aCCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGgcgc                                                                                                                        >  1:1842590/1‑84 (MQ=255)
                                                                                                      ctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACaa                                                 >  1:306032/1‑150 (MQ=255)
                                                                                                       tGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAg                                                >  2:1313986/1‑150 (MQ=255)
                                                                                                       tGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAg                                                <  2:605315/150‑1 (MQ=255)
                                                                                                        gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAgg                                               <  2:1664253/150‑1 (MQ=255)
                                                                                                         aGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGATGCGCAGCCCTTTCTCGTCACAAGGc                                              <  1:831869/150‑1 (MQ=255)
                                                                                                          ggTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGACGTGGAGCTTTCAGCTAGACGACATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGcc                                             >  1:227890/1‑150 (MQ=21)
                                                                                                             gggCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCCGCGCCTCGTCGTGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCt                                          <  2:1928043/150‑1 (MQ=37)
                                                                                                              ggCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTc                                         <  2:918621/150‑1 (MQ=255)
                                                                                                                 tGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCCTGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCa                                      >  1:260246/1‑150 (MQ=255)
                                                                                                                    gTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGccgctcccgctc                                   >  1:480629/1‑150 (MQ=255)
                                                                                                                    gTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTc                                   <  1:1332132/150‑1 (MQ=255)
                                                                                                                     ttCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCa                                                                                         >  1:735013/1‑95 (MQ=255)
                                                                                                                     ttCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCa                                                                                         <  2:735013/95‑1 (MQ=255)
                                                                                                                        cTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGa                               >  1:676520/1‑150 (MQ=255)
                                                                                                                         tgttgtGATGCTGATGGTTTCGTTCTTTGGGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCAGGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGac                              <  2:1273267/150‑1 (MQ=255)
                                                                                                                         tgttgtGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAgg                                               <  1:1444332/133‑1 (MQ=255)
                                                                                                                         tgttgtGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAgg                                               >  2:1444332/1‑133 (MQ=255)
                                                                                                                              tgATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGAccacca                         >  2:1025024/1‑150 (MQ=255)
                                                                                                                                aTGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCGGTGTTTCGTTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCCCCCACTCAAGACCACCAgg                       >  1:1161041/1‑150 (MQ=25)
                                                                                                                                  gCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACGCCAGACCACCAGGcc                     >  1:508576/1‑150 (MQ=255)
                                                                                                                                          cTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCt             >  1:512345/1‑150 (MQ=255)
                                                                                                                                          cTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCt             >  2:1883825/1‑150 (MQ=255)
                                                                                                                                          cTTCGTTCTTTGTGGGAGCGGCCTTGTGCCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCGACTGCATGAACCGCCGGGGCGGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCt             >  1:40082/1‑150 (MQ=255)
                                                                                                                                           ttCGTTCTTTTTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACt                                                                                            >  2:1128768/1‑70 (MQ=255)
                                                                                                                                           ttCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACt                                                                                            <  1:1128768/70‑1 (MQ=255)
                                                                                                                                              gTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTcaca         <  1:1313986/150‑1 (MQ=255)
                                                                                                                                                tCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGaccacc                          <  1:952570/131‑1 (MQ=255)
                                                                                                                                                tCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGaccacc                          >  2:952570/1‑131 (MQ=255)
                                                                                                                                                  tttGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTca           >  1:1463784/1‑144 (MQ=255)
                                                                                                                                                  tttGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTca           <  2:1463784/144‑1 (MQ=255)
                                                                                                                                                  tttGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGCGGTTGCTGCGCCGCACTATCGCGACACAAGGCCGCTCCCACTCCACACCACCAGGCCCTGCGCCTCCCATCCt     >  2:263651/1‑150 (MQ=37)
                                                                                                                                                     GTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAAc  >  2:260246‑M1/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GGCCACGATCAGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAAC  >  NC_002947/5681248‑5681546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.