New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 571825290 (1.230)7 (0.100) 6/236 NT 7.4% coding (895/1917 nt) PP_5020 methyl‑accepting chemotaxis protein
?NC_002947 = 5718270 89 (1.280)coding (913/1917 nt) PP_5020 methyl‑accepting chemotaxis protein

Only 100 of 124 total aligned reads displayed.

AGCAAGCGCTGCAACGCATGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCA  >  NC_002947/5718106‑5718399
                                                                                                                                                  |                                                                                                                                                    
aGCAAGCGCTGCAACGCATGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTg                                                                                                                                                   <  1:1639408/150‑1 (MQ=255)
aGCAAGCGCTGCAACGCATGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTg                                                                                                                                                   <  2:581938/150‑1 (MQ=255)
 gCAAGCGCTGCAACGCATGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTgg                                                                                                                                                  >  2:1095270/1‑150 (MQ=255)
  cAAGCGCTGCAACGCATGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGc                                                                                                                                                 <  1:609079/150‑1 (MQ=255)
     gcgcTGCAACGCATGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCctg                                                                                                                                              <  1:856876/150‑1 (MQ=255)
       gcTGCAACGCATGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCctgct                                                                                                                                            <  2:1105166/150‑1 (MQ=255)
       gcTGCAACGCATGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCctgct                                                                                                                                            <  2:65506/150‑1 (MQ=255)
       gcTGCAACGCATGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCctgct                                                                                                                                            >  2:450214/1‑150 (MQ=255)
        cTGCAACGCATGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCctgctg                                                                                                                                           <  2:1002860/150‑1 (MQ=255)
        cTGCAACGCATGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACGGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCctgctg                                                                                                                                           <  1:1306929/150‑1 (MQ=255)
           cAACGCATGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGgcc                                                                                                                                        <  1:256708/150‑1 (MQ=255)
           cAACGCATGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGgcc                                                                                                                                        <  1:450214/150‑1 (MQ=255)
            aaCGCATGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTg                                                                                                                                                   <  1:1722309/138‑1 (MQ=255)
            aaCGCATGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTg                                                                                                                                                   >  2:1722309/1‑138 (MQ=255)
                 aTGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTgg                                                                                                                                  <  2:230045‑M2/150‑3 (MQ=255)
                  tGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTggg                                                                                                                                 >  1:1662371‑M2/1‑147 (MQ=255)
                   ggTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCaggcggccagcaggccaagggc                                                                                                                                >  1:1873980‑M1/1‑128 (MQ=255)
                     ttGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTgggcc                                                                                                                               <  2:884600‑M2/149‑6 (MQ=255)
                     ttGAACAAGGACCGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTgggcc                                                                                                                               >  1:884600‑M2/1‑144 (MQ=255)
                        aaCAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTa                                                                                                                           <  1:1751366/150‑1 (MQ=255)
                        aaCAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTa                                                                                                                           >  2:671190/1‑150 (MQ=255)
                          cAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTAcc                                                                                                                         >  2:1072101/1‑150 (MQ=255)
                                    tACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGatca                                                                                                               <  1:858646/150‑1 (MQ=255)
                                    tACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGatca                                                                                                               <  2:971576/150‑1 (MQ=255)
                                             aGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGc                                                                                                      <  1:670003/150‑1 (MQ=255)
                                               gccagccaGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTg                                                                                                    >  2:821256/1‑150 (MQ=255)
                                                ccagccagATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTgc                                                                                                   <  1:671190/150‑1 (MQ=255)
                                                 cagccagATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTgcg                                                                                                  >  2:1448590/1‑150 (MQ=255)
                                                  agccagATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTgcgc                                                                                                 <  1:1814188/150‑1 (MQ=255)
                                                            tgaCCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCaggcggccagcaggccaagggccagtgccagcacggtggcaa                                                                                                            >  1:1325324‑M1/1‑87 (MQ=255)
                                                            tgaCCGCTTCGCAAACCGAGCTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCaggcggccagcaggccaagggccagtgccagcacggtggcaa                                                                                                            <  2:1325324‑M1/129‑43 (MQ=255)
                                                             gaCCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTgcg                                                                                     >  1:1688163/1‑150 (MQ=255)
                                                                cGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTgcgcgc                                                                                  >  1:955628/1‑150 (MQ=255)
                                                                cGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTgcgcgc                                                                                  >  1:1624314/1‑150 (MQ=255)
                                                                cGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTgcgcgc                                                                                  >  2:1089566/1‑150 (MQ=255)
                                                                  cTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTAcc                                                                                                                         >  2:1169021/1‑110 (MQ=255)
                                                                  cTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTAcc                                                                                                                         <  1:1169021/110‑1 (MQ=255)
                                                                   ttCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGcgccgc                                                                               >  2:1698740/1‑150 (MQ=255)
                                                                      gCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCaga                                                                            >  2:983769/1‑150 (MQ=255)
                                                                         aaCCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCaga                                                                            >  2:125338/1‑147 (MQ=255)
                                                                         aaCCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCaga                                                                            <  1:125338/147‑1 (MQ=255)
                                                                            cGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCgtgt                                                                      <  1:1121272/150‑1 (MQ=255)
                                                                              gggTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTgg                                                                    <  1:882014/149‑1 (MQ=255)
                                                                                  gcgcGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAg                                                                >  1:1487009/1‑150 (MQ=255)
                                                                                        tgccgctgccgcGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGc                                                                                                      >  2:1574089/1‑107 (MQ=255)
                                                                                        tgccgctgccgcGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGc                                                                                                      <  1:1574089/107‑1 (MQ=255)
                                                                                         gccgctgccgcGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGAc                                                         <  2:1624314/150‑1 (MQ=255)
                                                                                          ccgctgccgcGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGAcc                                                        >  1:591146/1‑150 (MQ=255)
                                                                                            gctgccgcGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCaggcggccagcaggccaagggccag                                                                                                                             >  1:1450780‑M1/1‑55 (MQ=255)
                                                                                                   cgcAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCaga                                               <  1:562902/150‑1 (MQ=255)
                                                                                                      aGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCACTGGAGACCTAACCCAGAGcc                                            <  2:565590/150‑1 (MQ=255)
                                                                                                           aaaaCACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAg                                       <  1:1104451/150‑1 (MQ=255)
                                                                                                            aaaCACTGCTCACGGTTGCCACCGTGCTGGCACTGTCCCTTGGCCTGCTGGCCGCCTGGGCCATTACGCCCCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAgg                                      <  1:821256/150‑1 (MQ=255)
                                                                                                             aaCACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGt                                     <  1:1220345/150‑1 (MQ=255)
                                                                                                                   cagcACGGTGGCAACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAAcg                               >  1:1367261/4‑150 (MQ=255)
                                                                                                                    agcACGGTGGCAACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAAcgc                              >  1:1201660/3‑150 (MQ=255)
                                                                                                                       aCGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCCGCGCCTGCAGGTACAAcgccgc                           >  2:852388/1‑150 (MQ=255)
                                                                                                                       aCGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAAcgccgc                           >  2:1829541/1‑150 (MQ=255)
                                                                                                                           ttGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTgggccagtgccagcacggtggcaaccgtgagcagtgttttggcctgcgcggcagcggcatcgcgcagctcggtttgcgaagcggtca                                             <  2:1325324‑M2/129‑88 (MQ=255)
                                                                                                                           ttGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTgggccagtgccagcacggtggcaaccgtgagcagtgttttggcctgcgcggcagcggcatcgcgcacctcggtttgcgaagcggtca                                             >  1:1325324‑M2/1‑42 (MQ=255)
                                                                                                                           ttGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGcgacg                       >  2:1280214/1‑150 (MQ=255)
                                                                                                                               cACCGTGCTGGCACTGGCCCTTGGTCTGCTGGCCGCCTGGGCCATTACCTGGCAGATCAACATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCACAGCCTGCAGGGACAACGCCGCGACGAACt                   >  2:674669/1‑150 (MQ=255)
                                                                                                                               cACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCaga                                               >  1:673100/1‑122 (MQ=255)
                                                                                                                               cACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCaga                                               <  2:673100/122‑1 (MQ=255)
                                                                                                                               cACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACt                   >  1:1639860/1‑150 (MQ=255)
                                                                                                                               cACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACt                   >  1:1780825/1‑150 (MQ=255)
                                                                                                                               cACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACACAGAGACAGCAGGTACAACGCCGCGACGAACt                   >  2:1567858/1‑150 (MQ=255)
                                                                                                                                aCCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTg                  <  2:955628/150‑1 (MQ=255)
                                                                                                                                 ccGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTgg                 <  1:983769/150‑1 (MQ=255)
                                                                                                                                 ccGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCT‑CGCCTGAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTgg                 <  1:1089566/150‑1 (MQ=255)
                                                                                                                                   gTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGc               <  2:1487009/150‑1 (MQ=255)
                                                                                                                                   gTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGc               <  2:787302/150‑1 (MQ=255)
                                                                                                                                    tGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGc                                                                   <  1:524120/97‑1 (MQ=255)
                                                                                                                                    tGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGc                                                                   >  2:524120/1‑97 (MQ=255)
                                                                                                                                    tGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGACATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGcc              >  1:242566/1‑150 (MQ=255)
                                                                                                                                       tGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAAt           >  1:506381/1‑150 (MQ=255)
                                                                                                                                         gCACTGGCCCTTGGCCTGCTGGCCGCCTgggccagtgccagcacggtggcaaccgtgagcagtgttttggcctgcgcggcagcggcatcgcgcacctcggtttgcgaagcggtcatcatctggctggcctgcagcagtaccgtgccttgt          <  2:1873980‑M2/150‑123 (MQ=255)
                                                                                                                                         gCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCa                                                 >  2:1218652/1‑110 (MQ=255)
                                                                                                                                         gCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCa                                                 <  1:1218652/110‑1 (MQ=255)
                                                                                                                                         gCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCa                                        <  2:1441001/119‑1 (MQ=255)
                                                                                                                                         gCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCa                                        >  1:1441001/1‑119 (MQ=255)
                                                                                                                                         gCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTg         <  1:1829541/150‑1 (MQ=255)
                                                                                                                                         gCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGAC‑CCGTTTCCCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTg         <  1:611908/150‑1 (MQ=255)
                                                                                                                                           aCTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGc                                                                          <  1:720874/83‑1 (MQ=255)
                                                                                                                                           aCTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAAcgccgc                           >  2:1864825/1‑130 (MQ=255)
                                                                                                                                           aCTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAAcgccgc                           <  1:1864825/130‑1 (MQ=255)
                                                                                                                                           aCTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCa       <  2:816397/150‑1 (MQ=255)
                                                                                                                                            cTGGCCCTTGGCCTGCTGGCCGCCTgggccagtgccagcacggtggcaaccgtgagcagtgttttggcctgcgcggcagcggcatcgcgcacctcggtttgcgaagcggtcatcatctggctggcctgcagcagtaccgtgccttgttca       <  1:123987‑M2/150‑126 (MQ=255)
                                                                                                                                            cTGGCCCTTGGCCTGCTGGCCGCCTgggccagtgccagcacggtggcaaccgtgagcagtgttttggcctgcgcggcagc                                                                             <  2:1450780‑M2/80‑56 (MQ=255)
                                                                                                                                            cTGGCCCTTGGCCTGCTGGCCGCCTgggccagtgccagcacggtggcaaccgtgagcagtgttttggcctgcgcggcagc                                                                             >  1:1450780‑M2/1‑25 (MQ=255)
                                                                                                                                            cTGGCCCTTGGCCTGCTGGCCGCCCGGGCCACTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAg      <  1:1095270/150‑1 (MQ=255)
                                                                                                                                             tGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCatg     >  1:1627709/1‑148 (MQ=255)
                                                                                                                                             tGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAgg     <  1:230045/150‑1 (MQ=255)
                                                                                                                                              ggCCCGTGGCCTGCTGGCCGCCTGGGCCATTACCCCGCGTATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGc    <  1:100340/150‑1 (MQ=255)
                                                                                                                                               gCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGcc   >  1:856712/1‑150 (MQ=255)
                                                                                                                                                cccTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGCACTGGGCCAATTGCAGGccc  >  1:329312/1‑149 (MQ=255)
                                                                                                                                                cccTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCa  <  1:1280214/150‑1 (MQ=255)
                                                                                                                                                 ccaggcggccagcaggccaagggccagtgccagcacggtggcaaccgtgagcagtgttttggcctgcgcggcagcggcatcgcgcacctcggtttgcgaagcggtcatcatctggctggcctgcagcagtaccgtgccttgttcaaccat  <  2:230045‑M1/150‑149 (MQ=255)
                                                                                                                                                  cTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTa                                    <  2:1911870/114‑1 (MQ=255)
                                                                                                                                                  cTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTa                                    >  1:1911870/1‑114 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
AGCAAGCGCTGCAACGCATGGTTGAACAAGGCACGGTACTGCTGCAGGCCAGCCAGATGATGACCGCTTCGCAAACCGAGGTGCGCGATGCCGCTGCCGCGCAGGCCAAAACACTGCTCACGGTTGCCACCGTGCTGGCACTGGCCCTTGGCCTGCTGGCCGCCTGGGCCATTACCCGGCAGATCATCATTCCGCTGCGCC‑AAACACTGCGCGCCGCAGAGCGTGTGGCCAGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCA  >  NC_002947/5718106‑5718399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.