New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5971256 =70 (0.960)4 (0.060) 4/234 NT 5.9% coding (94/2124 nt) PP_5236 hypothetical protein
?NC_002947 5971282 = 61 (0.890)coding (68/2124 nt) PP_5236 hypothetical protein

GCCCTGTCGCCCTGGTTTTCCTGGTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGCC  >  NC_002947/5971111‑5971403
                                                                                                                                                  |                                                                                                                                                   
gCCCTGTCGCCCTGGTTTTCCTGGTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCAcc                                                                                                                                                 >  2:552033/1‑150 (MQ=255)
 gttcggcaaaaatggatccaataggctttgcgcaggcgtcaggtatgactcagtgttgttgggtaaccgcagttgccatgggatggcactgcgtcttctttcaaatggacttgaggtattgctccgtgcaaccgctcgcccgcacGCAcc                                                                                                                                                 >  1:1425560‑M1/146‑150 (MQ=255)
 cccTGTCGCCCTGGTTTTCCTGGTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCa                                                                                                                                                <  1:1637224/150‑1 (MQ=255)
   tcggcaaaaatggatccaataggctttgcgcaggcgtcaggtatgacttagtgttgttgggtaaccgcagttgccatgggatggcactgcgtcttctttcaaatggacttgaggtattgctccttgcaaacgctcgcccgcacGCACCAg                                                                                                                                               >  1:1422101‑M1/144‑150 (MQ=255)
    tGTCGCCCTAGTATTCCTGATCGAGCAGCCTGTGCCGGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGTCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGtt                                                                                                                                             <  2:798252/150‑1 (MQ=255)
       cGCCCTGGTTTTCCTGGTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCTCTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTcgc                                                                                                                                          <  2:1393916/150‑1 (MQ=255)
       cGCCCTGGTTTTCCTGGTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCGCTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTcgc                                                                                                                                          <  2:1393425/150‑1 (MQ=255)
          ccTGGTTTTCCTGGTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCa                                                                                                                                       >  2:568310/1‑150 (MQ=255)
           cTGGTTTTCCTGGTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCAt                                                                                                                                      >  2:867534/1‑150 (MQ=255)
                 ttCCTGGTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTg                                                                                                                                <  1:745122/150‑1 (MQ=255)
                     tGGTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGGCCGCACCAGTTCGCGCATTACCTGgtgc                                                                                                                            <  1:1232303/150‑1 (MQ=255)
                      ggTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGgtgcg                                                                                                                           >  1:1229036/1‑150 (MQ=255)
                       gTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCa                                                                                                                                                   <  1:1240166/125‑1 (MQ=255)
                       gTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCa                                                                                                                                                   >  2:1240166/1‑125 (MQ=255)
                           accagcaTGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCCAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCgg                                                                                                                      <  1:178971/148‑1 (MQ=255)
                               gcaTGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGa                                                                                                                  >  2:1246559/1‑150 (MQ=255)
                                caTGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAg                                                                                                                 >  1:354668/1‑150 (MQ=255)
                                     gCCCGTCAATGGCCGCCAGGTAGGCCGGTAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGGGCGTGCGGGCGAGCGttt                                                                                                            <  2:495428/150‑1 (MQ=255)
                                     gCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGttt                                                                                                            <  2:354668/150‑1 (MQ=255)
                                     gCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGttt                                                                                                            >  2:1291678/1‑150 (MQ=255)
                                     gCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGttt                                                                                                            <  1:904590/150‑1 (MQ=255)
                                      cccGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCa                                                                                                                                                <  2:1033074/113‑1 (MQ=255)
                                      cccGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCa                                                                                                                                                >  1:1033074/1‑113 (MQ=255)
                                       ccGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGc                                                                                                          >  2:1856809/1‑150 (MQ=255)
                                         gTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCAc                                                                                                        >  1:458232/1‑150 (MQ=255)
                                          tCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTgagga                                                                                                       <  1:1341523/150‑5 (MQ=255)
                                             aTGGCCGCCAGGTAGGCCGGGCACTCGAAGGGCGGCGCTTGGCGCTCGGTGTCGTCCAGCCTTTCGAAAAAGCTGTTGAGTTCGACGAATGCACCCGCCTGCACCCGCTCGCAAATTACACGGTGAGTGTGGTCGATCGTTTGCACggtg                                                                                                    <  2:426258/150‑3 (MQ=255)
                                              tGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGc                                                                                                   >  1:624356/1‑150 (MQ=255)
                                                gccgccAGGTAGGACGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCaa                                                                                                 >  2:387339/1‑150 (MQ=255)
                                                 ccgccAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAAt                                                                                                <  1:174494/150‑1 (MQ=255)
                                                 ccgccAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACCAATGCACTTGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGTGCGAGCGTTTACACGGAGAAAt                                                                                                <  2:124269/150‑1 (MQ=255)
                                                  cgccAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATa                                                                                               <  1:1856809/150‑1 (MQ=255)
                                                  cgccAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATa                                                                                               <  1:510197/150‑1 (MQ=255)
                                                    agtgttgttgggtaaccgcagttgccatgggatggcactgcgtcttctttcaaatggacttgaggtattgctccgtgcaaacgctcgcccgcacGCACCAg                                                                                                                                               >  1:647237‑M1/95‑101 (MQ=255)
                                                    agtgttgttgggtaaccgcagttgccatgggatggcactgcgtcttctttcaaatggacttgaggtattgctccgtgcaaacgctcgcccgcacGCACCAg                                                                                                                                               <  2:647237‑M1/7‑1 (MQ=255)
                                                     cAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCt                                                                                            >  1:133433/1‑150 (MQ=255)
                                                        gTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCaa                                                                                         >  1:1526802/1‑150 (MQ=255)
                                                         tAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAg                                                                                        >  1:1394232/1‑150 (MQ=255)
                                                           ttgggtaaccgcagttgccatgggatggcactgcgtcttctttcaaatggacttgaggtattgctccgtgcaaacgctcgcccgcacGCACCAGTTCGCGCATTACCTGGTGCGTGCgg                                                                                                                      <  1:1882261‑M1/32‑1 (MQ=255)
                                                           ttgggtaaccgcagttgccatgggatggcactgcgtcttctttcaaatggacttgaggtattgctccgtgcaaacgctcgcccgcacGCACCAGTTCGCGCATTACCTGGTGCGTGCgg                                                                                                                      >  2:1882261‑M1/88‑119 (MQ=255)
                                                             ccGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCa                                                                                    <  2:133433/150‑1 (MQ=255)
                                                                 gAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAg                                                                                                                 <  1:1138617/117‑1 (MQ=255)
                                                                 gAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAg                                                                                                                 >  2:1138617/1‑117 (MQ=255)
                                                                    cTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGaaa                                                                             >  1:1098358/1‑150 (MQ=255)
                                                                    cTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGaaa                                                                             <  1:1246559/150‑1 (MQ=255)
                                                                    cTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGaaa                                                                             <  1:552033/150‑1 (MQ=255)
                                                                          gggcgggGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGAc                                                                       <  1:568310/150‑1 (MQ=255)
                                                                              ggggCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAg                                                                   <  2:1526802/150‑1 (MQ=255)
                                                                               gggCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGt                                                                  <  1:7686/150‑1 (MQ=255)
                                                                                ggCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTg                                                                 <  1:1291678/150‑1 (MQ=255)
                                                                                   cTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGTACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCAt                                                                                   <  1:23996/129‑1 (MQ=255)
                                                                                   cTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGTACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCAt                                                                                   >  2:23996/1‑129 (MQ=255)
                                                                                    tGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCAt                                                             <  2:1098358/150‑1 (MQ=255)
                                                                                        gCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGGTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCa                                                         >  2:1641060/1‑150 (MQ=255)
                                                                                            aCTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGaaa                                                                             >  2:681972/1‑127 (MQ=255)
                                                                                            aCTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGaaa                                                                             <  1:681972/127‑1 (MQ=255)
                                                                                            aCTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATgg                                                      <  2:1394232/150‑1 (MQ=255)
                                                                                              tGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGt                                                                                       <  2:1314786/115‑1 (MQ=255)
                                                                                              tGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGt                                                                                       >  1:1314786/1‑115 (MQ=255)
                                                                                               gAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTTGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCAttt                                                                                 >  1:321342/1‑120 (MQ=255)
                                                                                               gAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCAttt                                                                                 <  2:321342/120‑1 (MQ=255)
                                                                                                     cGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCgg                                             <  2:624356/150‑1 (MQ=255)
                                                                                                      gAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGt                                            >  2:789397/1‑150 (MQ=255)
                                                                                                        gCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAg                                                                                        >  2:1193777/1‑104 (MQ=255)
                                                                                                        gCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAg                                                                                        <  1:1193777/104‑1 (MQ=255)
                                                                                                         ccTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTAc                                         <  1:387339/150‑1 (MQ=255)
                                                                                                                  aaaGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAacaaca                                >  2:346441/1‑150 (MQ=255)
                                                                                                                    gtattgctccgtgcaaacgctcgcccgcacGCACCAGTTCGCGCATTACCTGgtgcgt                                                                                                                          <  1:1683017‑M1/28‑1 (MQ=255)
                                                                                                                    gtattgctccgtgcaaacgctcgcccgcacGCACCAGTTCGCGCATTACCTGgtgcgt                                                                                                                          >  2:1683017‑M1/31‑58 (MQ=255)
                                                                                                                     gCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTg                                                                 <  2:600070/114‑1 (MQ=255)
                                                                                                                     gCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTg                                                                 >  1:600070/1‑114 (MQ=255)
                                                                                                                     gCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCgg                                             >  2:678693/1‑134 (MQ=255)
                                                                                                                     gCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCgg                                             <  1:678693/134‑1 (MQ=255)
                                                                                                                                 gacgaATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGttt                                                                                                            <  2:1561765/59‑1 (MQ=255)
                                                                                                                                 gacgaATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGttt                                                                                                            >  1:1561765/1‑59 (MQ=255)
                                                                                                                                 gacgaATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGa                 <  2:458232/150‑1 (MQ=255)
                                                                                                                                  actaaTGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGGCCATTTGAAAGAAGACTCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGAc                <  1:724759/147‑1 (MQ=255)
                                                                                                                                    gaATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGc              >  2:765391/1‑150 (MQ=255)
                                                                                                                                    caaTGCACTGGTCCGCTCCAGTTGGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGc              <  2:603523/149‑1 (MQ=255)
                                                                                                                                          aCTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTgcgc        >  2:1690171/1‑150 (MQ=255)
                                                                                                                                            tGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCaa      >  2:1454187/1‑150 (MQ=255)
                                                                                                                                               ccTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGc   <  1:867534/150‑1 (MQ=255)
                                                                                                                                                cTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGcc  >  1:1728838/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
GCCCTGTCGCCCTGGTTTTCCTGGTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGCC  >  NC_002947/5971111‑5971403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.