New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6062575 =	74 (1.010)	4 (0.060)	4/240	NT	5.1%	coding (185/1149 nt)	alkT	rubredoxin‑NAD(+) reductase
	?	NC_002947	6062610 =	78 (1.100)					coding (150/1149 nt)	alkT	rubredoxin‑NAD(+) reductase

CTGCGCCCCCCAGGCCAGCACCAGGTCGCGGTATTCCACGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGAGCTTGCGAAATTCACGGGCCAGGTTGTAGCCC  >  NC_002947/6062430‑6062721                                                                                                                                                  |                                                                                                                                                     cTGCGCCCCCCAGGCCAGCACCAGGTCGCGGTATTCCACGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCAt                                                                                                                                                  <  2:1082161/150‑1 (MQ=255)          ccAGGCCAGCACCAGGTCGCGGTATTCCACGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGcc                                                                                                                                       <  2:1726102/150‑1 (MQ=255)              gCCAGCACCAGGTCGCGGTATTCCACGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCg                                                                                                                                   >  2:452775/1‑150 (MQ=255)               tcatcggtaccggccttgcgggctacaacctggcccgtgaatttcgcaagctcgatgcgcagacgccgctgttgctgatcaccgccgacgatggtcgttcgtactccaagccgatgctttccatgggctttGCCATGCA‑CA‑GGCCGTCgg                                                                                                                                  <  2:17296‑M1/19‑1 (MQ=255)                cAGCACCAGGTCGCGGTATTCCACGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGc                                                                                                                                 <  1:1139959/150‑1 (MQ=255)                 aGCACCAGGTCGCGGTATTCCACGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTGCGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCg                                                                                                                                >  1:19494/1‑150 (MQ=255)                         gTCGCGGTATTCCACGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTg                                                                                                                        >  2:972602/1‑150 (MQ=255)                            gcgGTATTCCACGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCtt                                                                                                                     >  2:1816381/1‑150 (MQ=255)                            gcgGTATTCCACGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCtt                                                                                                                     >  2:1122057/1‑150 (MQ=255)                             cgGTATTCCACGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTg                                                                                                                    >  1:457624/1‑150 (MQ=255)                              ggTATTCCACGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGCTACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTgg                                                                                                                   <  1:131852/150‑1 (MQ=255)                              ggTATTCCACGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTgg                                                                                                                   >  2:1129349/1‑150 (MQ=255)                              ggTATTCCACGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTgg                                                                                                                   >  1:55020/1‑150 (MQ=255)                               gTATTCCACGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGc                                                                                                                  >  1:814913/1‑150 (MQ=255)                                  gggctacaacctggcccgtgaatttcgcaagctcgatgcgcagacgccgctgttgctgatcaccgccgacgatggtcgttcgtactccaagccgatgctttccatgggctttGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCaaa                                                                                                               >  1:17296‑M1/113‑150 (MQ=255)                                    ccACGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGc                                                                                                             >  1:8172/1‑150 (MQ=255)                                      aCGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGccc                                                                                                           <  2:55020/150‑1 (MQ=255)                                        ggCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCACATCAGAGAGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCAt                                                                                                         <  2:1507950/150‑1 (MQ=255)                                          ccTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATgg                                                                                                       >  2:1653515/1‑150 (MQ=255)                                          ccTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATgg                                                                                                       >  1:1860372/1‑150 (MQ=255)                                          ccTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATgg                                                                                                       <  1:972602/150‑1 (MQ=255)                                           ctctTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCt                                                                                                                            <  2:1377454/128‑1 (MQ=255)                                           ctctTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCt                                                                                                                            >  1:1377454/1‑128 (MQ=255)                                           cctggcccgtgaatttcgcaagctcgatgcgcagacgccgctgttgctgatcaccgccgacgatggtcgttcgtactccaagccgatgctttccatgggctttGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTgg                                                                                                                   <  1:1000848‑M1/34‑1 (MQ=255)                                           cctggcccgtgaatttcgcaagctcgatgcgcagacgccgctgttgctgatcaccgccgacgatggtcgttcgtactccaagccgatgctttccatgggctttGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTgg                                                                                                                   >  2:1000848‑M1/104‑137 (MQ=255)                                            tctTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGaa                                                                                                     <  2:814913/150‑1 (MQ=255)                                             ccgcGCCGAACAACAGGCGCTTGTGGCCTGCGTCGCTGCCGCTGCTACGGGTATGGGTGCGGATGGCGGCGTTCAATTGCTCGGCCAGGCCGGGCGCCTCGGGCATGCA‑CC‑GGCCGCCGGGCTCCTCTGGCTTGGCATAGCCCATGGaaa                                                                                                    <  2:106519/147‑1 (MQ=255)                                               ccGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGAAGCAAAGCGCTTTTGGACGTATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGc                                                                                                  <  2:542595/149‑1 (MQ=255)                                                  ccGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATc                                                                                               <  2:1614955/150‑1 (MQ=255)                                                     aTCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGc                                                                                            <  1:1914592/150‑1 (MQ=255)                                                       ccACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCtt                                                                                          <  1:41386/150‑1 (MQ=255)                                                       ccACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCtt                                                                                          <  2:457624/150‑1 (MQ=255)                                                        cacaGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTg                                                                                         <  1:1129349/150‑1 (MQ=255)                                                        cacaGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTg                                                                                         <  1:123711/150‑1 (MQ=255)                                                         acaGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTgg                                                                                        >  1:1170189/1‑150 (MQ=255)                                                         acaGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTgg                                                                                        >  2:437854/1‑150 (MQ=255)                                                         acaGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCACCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTgg                                                                                        >  2:1355692/1‑150 (MQ=255)                                                          catccGCTTGTGGCCCGGGTCGAGGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGa                                                                                       <  1:792512/147‑1 (MQ=255)                                                           aGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGAACTCGGCCCCACATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAg                                                                                      >  2:958328/1‑150 (MQ=255)                                                             ccGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTgg                                                                                                                   <  1:216088/119‑1 (MQ=255)                                                             ccGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTgg                                                                                                                   >  2:216088/1‑119 (MQ=255)                                                             ccGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTACTCCTTCCTGGCAAAGCTCATGGAAAGCTGCGGCTgggcggg                                                                                    >  2:1385218/1‑146 (MQ=255)                                                                cTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCgg                                                                                                                                                      <  1:407156/83‑1 (MQ=255)                                                                cTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCgg                                                                                                                                                      >  2:407156/1‑83 (MQ=255)                                                                  tgtgGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTacgaac                                                                               <  1:945605/150‑1 (MQ=255)                                                                     ggCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGAc                                                                            <  1:1653515/150‑1 (MQ=255)                                                                      gCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGAcc                                                                           <  1:452775/150‑1 (MQ=255)                                                                      gCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGGAAACATCCTTCTGCTTGGCAAACCCCATGGAAAGCATCGGCTTGGAGTACGAACAAcc                                                                           >  2:460264/1‑150 (MQ=255)                                                                        ccGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTTGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCAt                                                                         >  2:359955/1‑150 (MQ=255)                                                                          gggTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCAtcg                                                                       >  1:953000/1‑150 (MQ=255)                                                                             tCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTTAAGTGCTCGGCCATGGCGCCCGCCTCGGCTATGCACCACCGACATC‑CCCCCCTTCT‑CTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACCCACGCCCAtcgtcg                                                                    >  1:138024/1‑150 (MQ=255)                                                                                   ccGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTg                                                              >  2:1888729/1‑150 (MQ=255)                                                                                       tGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCa                                                          <  2:475406/150‑1 (MQ=255)                                                                                       tGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCa                                                          <  1:1693164/150‑1 (MQ=255)                                                                                        gATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAg                                                         <  2:1860372/150‑1 (MQ=255)                                                                                        gATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAg                                                         >  1:1219318/1‑150 (MQ=255)                                                                                            cGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAAc                                                     >  1:506453/1‑150 (MQ=255)                                                                                                    ggTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGt                                             >  2:1603029/1‑150 (MQ=255)                                                                                                     gTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTc                                            >  1:811396/1‑150 (MQ=255)                                                                                                     gTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTc                                            >  1:817996/1‑150 (MQ=255)                                                                                                     gTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCAGTCGGCGACCTTGTGCTTGGCAAATTCCATGGAAAGCATCGGCTTTGAGGACGAAAAACTATCGTCGGCGGGGATCAGGAACAGCGGCGTc                                            >  2:1860222/1‑150 (MQ=255)                                                                                                      tACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCt                                           >  1:1866180/1‑150 (MQ=255)                                                                                                         ggATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTa                                                                                    >  2:774403/1‑106 (MQ=255)                                                                                                         ggATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTa                                                                                    <  1:774403/106‑1 (MQ=255)                                                                                                               cGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGa                                  >  1:1491158/1‑150 (MQ=255)                                                                                                                cgCGTACAAGGGCTCCGCCATTGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGAg                                 <  2:1866180/149‑1 (MQ=255)                                                                                                                  cGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGAGCt                               <  2:1377429/150‑1 (MQ=255)                                                                                                                       aaTTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGAGCTTGCGa                          >  2:1550/1‑150 (MQ=255)                                                                                                                       aaTTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGAGCTTGCGa                          >  1:287713/1‑150 (MQ=255)                                                                                                                        aTTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTg                                                                                         >  2:363635/1‑86 (MQ=255)                                                                                                                        aTTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTg                                                                                         <  1:363635/86‑1 (MQ=255)                                                                                                                         ttGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGAGCTTGCGaaa                        <  1:1550/150‑1 (MQ=255)                                                                                                                         ttGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGAGCTTGCGaaa                        >  1:1409855/1‑150 (MQ=255)                                                                                                                           gCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGAGCTTGCGAAAtt                      <  2:1491158/150‑1 (MQ=255)                                                                                                                             tCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGAGCTTGCGAAATTCa                    >  2:142442/1‑150 (MQ=255)                                                                                                                             tCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCACATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGAGCTTGCGAAATTCa                    >  1:1721137/1‑150 (MQ=255)                                                                                                                              cGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGAGCTTGCGAAATTCAc                   <  2:287713/150‑1 (MQ=255)                                                                                                                                gCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTcggcgg                                                                <  2:1263823/103‑1 (MQ=255)                                                                                                                                gCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTcggcgg                                                                >  1:1263823/1‑103 (MQ=255)                                                                                                                                       cgcccgccTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGAGCTTGCGAAATTCACGGGCCAGGt          <  1:1816381/150‑1 (MQ=255)                                                                                                                                        gcccgccTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGAGCTTGCGAAATTCACGGGCCAGGtt         <  2:1219318/150‑1 (MQ=255)                                                                                                                                             ccTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGAGCTTGCGAAATTCACGGGCCAGGTTGTAGc    <  2:386759/150‑1 (MQ=255)                                                                                                                                               tCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGATCTTGCGAAATTCACGGGCCAGGTTGTAGccc  <  1:74809/150‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     CTGCGCCCCCCAGGCCAGCACCAGGTCGCGGTATTCCACGGCCTCTTCGCCGATCCACAGCCGCTTGTGGCCCGGGTCGATGCCGCTGATACGGGTATGGGTACGGATCTCGGCGTTCAATTGCTCGGCCATGGCGCCCGCCTCGGCCATGCA‑CA‑GGCCGTCGGCGTCCTTCTGCTTGGCAAAGCCCATGGAAAGCATCGGCTTGGAGTACGAACGACCATCGTCGGCGGTGATCAGCAACAGCGGCGTCTGCGCATCGAGCTTGCGAAATTCACGGGCCAGGTTGTAGCCC  >  NC_002947/6062430‑6062721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.