New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 321952 =84 (1.150)4 (0.060) 4/234 NT 5.0% intergenic (+237/+221) aguA/PP_0267 agmatine deiminase/ferric siderophore receptor
?NC_002947 321978 = 72 (1.050)intergenic (+263/+195) aguA/PP_0267 agmatine deiminase/ferric siderophore receptor

ACGGTCAGGCCGCGCCTCTGATCTGTAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCT  >  NC_002947/321831‑322127
                                                                                                                                                   |                                                                                                                                                     
cacaccgccatcagcgcctgcatctctgcttcgctgatcaacccttgggggtatcgcccggcaagcagacgtcgtgggtcggtcgtcctgaccctgatgcttccatggtgtttcaaccgctTCGCCAATCGCTCAGGCTTTTGGCGAAGc                                                                                                                                                     >  2:1338997‑M1/122‑150 (MQ=255)
aCGGTCAGGCCGCGCCTCTGATCTGTAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGc                                                                                                                                                     >  1:949628/1‑150 (MQ=255)
 cGGTCAGGCCGCGCCTCTGATCTGTAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCg                                                                                                                                                    <  2:103406/150‑1 (MQ=255)
        gCCGCGCCTCTGATCTGTAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGaaa                                                                                                                                             >  2:843474/1‑150 (MQ=255)
             gcCTCTGATCTGTAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCa                                                                                                                                        >  2:745471/1‑150 (MQ=255)
               ctctGATCTGTAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATg                                                                                                                                      <  1:208262/150‑1 (MQ=255)
               ctctGATCTGTAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATg                                                                                                                                      >  1:1434152/1‑150 (MQ=255)
                tctGATCTGTAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATgg                                                                                                                                     >  1:72188/1‑150 (MQ=255)
                  tGATCTGTAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGaa                                                                                                                                   <  2:111015/150‑1 (MQ=255)
                  tGATCTGTAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGaa                                                                                                                                   <  2:1434152/150‑1 (MQ=255)
                    aTCTGTAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGc                                                                                                                                 <  1:607528/150‑1 (MQ=255)
                     tCTGTAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGCGTACGTGTTGACGCCAACGCAGCAAGTTAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCa                                                                                                                                >  1:1693276/1‑150 (MQ=255)
                     tCTGTAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGaa                                                                                                                                   >  1:1131155/1‑147 (MQ=255)
                     tCTGTAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGaa                                                                                                                                   <  2:1131155/147‑1 (MQ=255)
                     tCTGTAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCa                                                                                                                                >  2:1508557/1‑150 (MQ=255)
                         tAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAg                                                                                                                            <  1:1064079/150‑1 (MQ=255)
                          aaCAATACCTACGTAAATTAGGCGCTCACGTTCGAGGCTGGACGTGTGGAAATGAACGCAGCAAGTGCACACCCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAgg                                                                                                                           <  1:1006543/150‑1 (MQ=255)
                          aaCAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAgg                                                                                                                           <  2:1569527/150‑1 (MQ=255)
                          aaCAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAgg                                                                                                                           <  1:745471/150‑1 (MQ=255)
                          aaCAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTAGAGAGGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAgg                                                                                                                           <  1:118111/150‑1 (MQ=255)
                          aaCAATACCTACGTAAATTAGCCACTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAgg                                                                                                                           <  1:1298570/150‑1 (MQ=255)
                           aCAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGc                                                                                                                                                     <  1:1793968/123‑1 (MQ=255)
                           aCAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGc                                                                                                                                                     >  2:1793968/1‑123 (MQ=255)
                             aaTACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGaa                                                                                                                                   <  1:1035538/139‑1 (MQ=255)
                             aaTACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGaa                                                                                                                                   >  2:1035538/1‑139 (MQ=255)
                              tcgctgatcaacccttgggggtatcgcccggcaagcagacgtcgtgggtcggtcgtcctgaccctgatgcttccatggtgtttcaaccgcttcgccaatcgctcaggcttttggcgaAGCGGTTGAAACACCATGGAAGCATCAGGGTCa                                                                                                                       <  2:1136941‑M2/33‑1 (MQ=255)
                              aTACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCa                                                                                                                       <  1:843474/150‑1 (MQ=255)
                                  cTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCa                                                                                                                             <  2:1472024/140‑1 (MQ=255)
                                  cTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCa                                                                                                                             >  1:1472024/1‑140 (MQ=255)
                                        aaaTTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGAcgaccga                                                                                                             <  1:208537/150‑1 (MQ=255)
                                         aaTTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCAt                                                                                                                               <  2:1486395/131‑1 (MQ=255)
                                         aaTTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCAt                                                                                                                               >  1:1486395/1‑131 (MQ=255)
                                             aGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCac                                                                                                        <  1:1508557/150‑1 (MQ=255)
                                                 gCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCacgacg                                                                                                    >  2:1272407/1‑150 (MQ=255)
                                                 gCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCacgacg                                                                                                    >  2:1600232/1‑150 (MQ=255)
                                                  cTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGt                                                                                                   <  2:72188/150‑1 (MQ=255)
                                                      cGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGc                                                                                               <  2:961718/150‑1 (MQ=255)
                                                           cAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGATGTCTGCTTGcc                                                                                          <  2:949628/150‑1 (MQ=255)
                                                           cAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGcc                                                                                          >  2:103534/1‑150 (MQ=255)
                                                            aGGGAGTACGTGTAGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTGTGGCGAAGTGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCg                                                                                         >  1:280679/1‑150 (MQ=255)
                                                               gAGTAGGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCACATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCCGTTGAAACACCATGGAAGCATCAGGGTCAGCACGCACGACCCCCGACGTCTGCTCGCCGGGc                                                                                      <  2:131829/150‑1 (MQ=255)
                                                                  tACGTGTGGACATGAACGCAGCAAGTGAGTCAGCTTTGCGCCCAGCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGAt                                                                                   >  1:859105/1‑150 (MQ=255)
                                                                     gtgtGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATAcc                                                                                >  1:505341/1‑150 (MQ=255)
                                                                      tgtgGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCTCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATCGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATAccc                                                                               <  2:859070/150‑1 (MQ=255)
                                                                      tgtgGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCACCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATAccc                                                                               <  2:859035/150‑1 (MQ=255)
                                                                          gACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGga                                                                                                                    <  1:1472465/109‑1 (MQ=255)
                                                                          gACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGga                                                                                                                    >  2:1472465/1‑109 (MQ=255)
                                                                          gACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCaa                                                                           >  2:473486/1‑150 (MQ=255)
                                                                           aCATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCCAg                                                                          <  1:1600232/150‑1 (MQ=255)
                                                                           aCATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAg                                                                          >  1:1736832/1‑150 (MQ=255)
                                                                               gAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGtt                                                                      <  1:579333/150‑1 (MQ=255)
                                                                               gAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGtt                                                                      <  1:1179863/150‑1 (MQ=255)
                                                                                 gtcgtcctgaccctgatgcttccatggtgtttcaaccgctTCGCCAATCGCTCAGGCTTTTGGCGAAg                                                                                                                                                      >  2:469439‑M1/41‑68 (MQ=255)
                                                                                 gtcgtcctgaccctgatgcttccatggtgtttcaaccgctTCGCCAATCGCTCAGGCTTTTGGCGAAg                                                                                                                                                      <  1:469439‑M1/28‑1 (MQ=255)
                                                                                 aCGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGa                                                                    >  2:1622377/1‑150 (MQ=255)
                                                                                   gcagcaAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATc                                                                  >  2:1936289/1‑150 (MQ=255)
                                                                                     agcaAGTGAGTCGGCTTTGCGCCCATCGGCAGATGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTGACGACAACGGACCCACGACGTCTGCTGGCGGGGCGATACCCCCAAGGGTTGATCAg                                                                >  2:907670/1‑150 (MQ=255)
                                                                                        tgaccctgatgcttccatggtgtttcaaccgctTCGCCAAAAGCCTGAGCGATTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGa                                                             <  2:1136941‑M1/117‑1 (MQ=255)
                                                                                              gTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCaga                                                       <  2:859105/150‑1 (MQ=255)
                                                                                                 ggCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAgg                                                                                                                           <  1:734146/79‑1 (MQ=255)
                                                                                                 ggCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAgg                                                                                                                           >  2:734146/1‑79 (MQ=255)
                                                                                                    tttGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCa                                                 >  2:268852/1‑150 (MQ=255)
                                                                                                    tttGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCa                                                 <  2:1693276/150‑1 (MQ=255)
                                                                                                       gcgcCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGgc                                              <  2:505341/150‑1 (MQ=255)
                                                                                                         gcCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGgcgc                                            >  2:1197107/1‑150 (MQ=255)
                                                                                                         gcCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGgcgc                                            >  2:1352793/1‑150 (MQ=255)
                                                                                                         gcCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGgcgc                                            >  1:875027/1‑150 (MQ=255)
                                                                                                         gcCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGgcga                                            >  1:280757/1‑149 (MQ=255)
                                                                                                          cccATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCt                                           >  2:717910/1‑150 (MQ=255)
                                                                                                           ccATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATgg                                                                                                                                     <  2:832406/59‑1 (MQ=255)
                                                                                                           ccATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATgg                                                                                                                                     >  1:832406/1‑59 (MQ=255)
                                                                                                           ccATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTg                                                                     >  2:198202/1‑123 (MQ=255)
                                                                                                           ccATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTg                                                                     <  1:198202/123‑1 (MQ=255)
                                                                                                              tCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGctgctg                                       <  1:1936289/150‑1 (MQ=255)
                                                                                                                ggCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGTCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGc                                     >  1:1869422/1‑150 (MQ=255)
                                                                                                                ggCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATgga                                     >  2:1152362/1‑149 (MQ=255)
                                                                                                                ggCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGc                                     <  1:103534/150‑1 (MQ=255)
                                                                                                                     ttGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGgtgt                                <  2:832992/150‑1 (MQ=255)
                                                                                                                      tGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGtgtg                               <  1:268852/150‑1 (MQ=255)
                                                                                                                      gcttcgccaaaagcctgagcgattggcgaAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGtgtg                               >  2:1338997‑M2/30‑150 (MQ=255)
                                                                                                                       cttcgccaaaagcctgagcgattggcgaAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGgacgac                                                                                                                >  2:469439‑M2/29‑68 (MQ=255)
                                                                                                                       cttcgccaaaagcctgagcgattggcgaAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGgacgac                                                                                                                <  1:469439‑M2/40‑1 (MQ=255)
                                                                                                                              AATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGAt                       >  1:473486‑M1/1‑150 (MQ=255)
                                                                                                                                   cTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGAtt                  >  2:359405/1‑150 (MQ=255)
                                                                                                                                    tCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTg                 >  2:1766464/1‑150 (MQ=255)
                                                                                                                                       ggCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCAc              >  2:861185/1‑150 (MQ=255)
                                                                                                                                        gCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCAcc             >  1:857514/1‑150 (MQ=255)
                                                                                                                                        gCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCAcc             >  1:207856/1‑150 (MQ=255)
                                                                                                                                          ttttGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGAt                                        <  1:118385/121‑1 (MQ=255)
                                                                                                                                          ttttGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGAt                                        >  2:118385/1‑121 (MQ=255)
                                                                                                                                          ttttGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTg           >  1:273393/1‑150 (MQ=255)
                                                                                                                                               gcgaAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCt      <  2:280757‑M2/146‑1 (MQ=255)
                                                                                                                                               gcgaAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCt      <  1:1136941‑M2/146‑1 (MQ=255)
                                                                                                                                                 gaAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGc    <  2:207856‑M2/148‑1 (MQ=255)
                                                                                                                                                 gaAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGc    <  1:1352793‑M2/148‑1 (MQ=255)
                                                                                                                                                   aGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCct  >  2:572505/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
ACGGTCAGGCCGCGCCTCTGATCTGTAACAATACCTACGTAAATTAGCCGCTCACGGGCCAGGGAGTACGTGTGGACATGAACGCAGCAAGTGAGTCGGCTTTGCGCCCATCGGCAGTTGATCGCCAATCGCTCAGGCTTTTGGCGAAGCGGTTGAAACACCATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCT  >  NC_002947/321831‑322127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.