New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 41402486 (1.180)7 (0.120) 6/192 NT 9.4% intergenic (+41/‑162) glnE/waaF glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
?NC_002947 = 414054 69 (1.220)intergenic (+71/‑132) glnE/waaF glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II

Only 100 of 109 total aligned reads displayed.

CGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATC  >  NC_002947/413905‑414200
                                                                                                                                                      |                                                                                                                                                   
cGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATc                                                                                                                                                     >  2:1662132/1‑150 (MQ=255)
 ggggTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCc                                                                                                                                                    >  1:642717‑M2/1‑149 (MQ=255)
    gTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCcctg                                                                                                                                                 <  2:1151948‑M2/150‑5 (MQ=255)
       aTCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCcctgtgg                                                                                                                                              <  1:1766659‑M2/150‑8 (MQ=255)
       aTCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCcctgtgg                                                                                                                                              >  1:1815341‑M2/1‑143 (MQ=255)
        tCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATc                                                                                                                                                     >  2:1846564/1‑142 (MQ=255)
        tCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCCCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATc                                                                                                                                                     <  1:1846564/142‑1 (MQ=255)
         cggtGCGGCACATTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTg‑ggg                                                                                                                                           >  2:1449589/4‑149 (MQ=255)
              cGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCcctgtgggagcggg                                                                                                                                       <  1:1785791‑M2/150‑15 (MQ=255)
                 cacaGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCC‑TGTGCAGTAcctgtgggagcgggctt                                                                                                                                    >  1:146653‑M2/1‑133 (MQ=255)
                  acaGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCcctgtgggagcgggcttg                                                                                                                                   <  2:854119‑M2/150‑19 (MQ=255)
                     gTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCcctgtgggagcgggcttgccc                                                                                                                                >  1:1151948‑M2/1‑129 (MQ=255)
                           cGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAATGGCCAATCcctgtgggagcgggcttgcccgcgaat                                                                                                                          <  2:1609415‑M2/150‑28 (MQ=255)
                                 aCGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCGCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCa                                                                                                                   >  2:1809602/1‑150 (MQ=255)
                                    ccGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCCCAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCAtgt                                                                                                                <  2:1133901/150‑1 (MQ=255)
                                    ccGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCTGGCTTGCCCGCGAATAGGCCAtgt                                                                                                                <  1:1715906/150‑1 (MQ=255)
                                       tGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAg                                                                                                             <  2:1803557/150‑1 (MQ=255)
                                        gAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGt                                                                                                            <  1:1283633/150‑1 (MQ=255)
                                         aaGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCGCGCGAATAGGCCATGTGAGTg                                                                                                           <  1:854119/150‑1 (MQ=255)
                                            tGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTa                                                                                                        <  2:447457/150‑1 (MQ=255)
                                              cggcggATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCCAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTaca                                                                                                      <  2:1303617/150‑1 (MQ=255)
                                              cggcggATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTaca                                                                                                      <  2:1745484/150‑1 (MQ=255)
                                                gcggATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCcctgtgggagcgg                                                                                                                                        >  1:826616‑M2/1‑102 (MQ=255)
                                                gcggATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCcctg                                                                                                                                                 <  2:1315163‑M2/106‑5 (MQ=255)
                                                gcggATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCcctg                                                                                                                                                 >  1:1315163‑M2/1‑102 (MQ=255)
                                                gcggATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCa                                                                                                                   <  1:52918/135‑1 (MQ=255)
                                                gcggATCTGGGGGGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCcctgtgggagcgg                                                                                                                                        <  2:826616‑M2/115‑14 (MQ=255)
                                                   gATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGTAATCcctgt                                                                                                                                                <  1:1799390‑M2/104‑6 (MQ=255)
                                                   gATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGTAATCcctgt                                                                                                                                                >  2:1799390‑M2/1‑99 (MQ=255)
                                                    aTCTGGGGTGAGTTGGTTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCACGCTCCCACAGTGACGGCACCG‑AAACTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTcc                                                                                                <  1:137093/150‑1 (MQ=38)
                                                     tCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTT‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCg                                                                                               <  1:1662132/150‑1 (MQ=255)
                                                         gggTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCcac                                                                                           >  1:90272/1‑150 (MQ=255)
                                                              aGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACTG‑GCGCTGAGGGGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGCACCGGCCATGTGAGTGGTACACTGTCCGCCACATAGc                                                                                      <  1:1124784/150‑1 (MQ=38)
                                                               gTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGcc                                                                                     <  2:90272/150‑1 (MQ=255)
                                                                ttGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCt                                                                                    >  1:327091/1‑150 (MQ=255)
                                                                  gggTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGGGGTACACTGTCCGCCACATAGCCTGa                                                                                  >  2:856010/1‑150 (MQ=255)
                                                                   ggTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGaa                                                                                 <  2:327091/150‑1 (MQ=255)
                                                                       acctcTGATACCGTGTTGGCTTCTTCGAGGGCGACCCCGCTCCACTAGCTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAAtata                                                                             <  2:510940/146‑1 (MQ=255)
                                                                        aaGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTcc                                                                                                >  1:244883/1‑130 (MQ=255)
                                                                        aaGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTcc                                                                                                <  2:244883/130‑1 (MQ=255)
                                                                          gCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAag                                                                          <  1:1195631/150‑1 (MQ=255)
                                                                           cTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCcctgt                                                                                                                                                <  1:1489203‑M2/80‑6 (MQ=255)
                                                                           cTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCcctgt                                                                                                                                                >  2:1489203‑M2/1‑75 (MQ=255)
                                                                           cTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAaga                                                                         <  1:1609415/150‑1 (MQ=255)
                                                                            tggtACGGTGTTGGCTTATTCGCGGGCAAGCCCGCCTCCACCGGTACTGCACAG‑GCCCTTAGCAGTGTGC‑ACCTCAGTGAGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAagag                                                                        <  1:436044/147‑1 (MQ=255)
                                                                            tGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGACTGGTACACTGTCCGCCACATAGCCTGAATATAAagat                                                                        >  1:510940/1‑149 (MQ=255)
                                                                             gATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAT‑GTCTTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCCCCACTACGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAgg                                                                       <  1:839707/150‑1 (MQ=38)
                                                                              aTACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCAGCATGTGAAGAggg                                                                      >  2:630148/1‑150 (MQ=255)
                                                                                aCCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCCACG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGGGCGGTCTTGCTCGCGAATAGGCCAGGTGAGTGGTAGACTGTCCGCCACATAGCCGGAAGGCAAAGAGGGGa                                                                    >  2:1919994/1‑150 (MQ=37)
                                                                                 ccGTGTTGGCTTATTCGCGGGCAAGCGCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAg                                                                   <  1:1919994/150‑1 (MQ=255)
                                                                                  cGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCAtgt                                                                                                                <  1:1136389/104‑1 (MQ=255)
                                                                                  cGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGcc                                                                                     >  1:1229024/1‑131 (MQ=255)
                                                                                  cGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGcc                                                                                     <  2:1229024/131‑1 (MQ=255)
                                                                                      ttGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAg                                                              <  1:418326/150‑1 (MQ=255)
                                                                                         gCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACTG‑GCCCTGAGCAGTCTGCAATCCCTGTT‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACAGAGCCGGAAGATAAAGAGGGCGGGCCAGGCt                                                           >  2:329663/1‑150 (MQ=38)
                                                                                         gCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCt                                                           >  1:720744/1‑150 (MQ=255)
                                                                                           ttATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTa                                                                                                        <  2:1427989/103‑1 (MQ=255)
                                                                                           ttATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGt                                                         >  2:1270842/1‑150 (MQ=255)
                                                                                            tcttggcgGGCAAGCGCCCTCCCACAGGTAGTGAACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGCGCGGGCTTGCTCGCGAATACGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTa                                                        <  2:821048/145‑1 (MQ=255)
                                                                                            tATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTa                                                        <  1:1809602/150‑1 (MQ=255)
                                                                                              ttCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTAcc                                                      <  2:432817/150‑1 (MQ=255)
                                                                                                cgcgGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAat                                                                                <  1:16746/122‑1 (MQ=255)
                                                                                                cgcgGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAat                                                                                >  2:16746/1‑122 (MQ=255)
                                                                                                  cgGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACAt                                                                                         <  2:1928714/111‑1 (MQ=255)
                                                                                                  cgGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACAt                                                                                         >  1:1928714/1‑111 (MQ=255)
                                                                                                       aaGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGCATATAACTAGGGGAGGCCAGGCTGTACCGCCGCCTGt                                             >  1:1300562/1‑150 (MQ=255)
                                                                                                        aGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTa                                            <  2:1766659/150‑1 (MQ=255)
                                                                                                          cccGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGc                                          <  2:1785791/150‑1 (MQ=255)
                                                                                                           ccGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGcc                                         >  1:22945/1‑150 (MQ=255)
                                                                                                            cGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCcctgtgggagcgggcttgcccgcgaataagccaacacggtatcagcttaaacccaactc                                                                                          >  2:1909536‑M2/1‑42 (MQ=255)
                                                                                                            cGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCcctgtgggagcgggcttgcccgcgaataagccaacacggtatcagcttaaacccaactc                                                                                          <  1:1909536‑M2/101‑60 (MQ=255)
                                                                                                            cGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCt                                        >  1:1473627/1‑150 (MQ=255)
                                                                                                             gCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTc                                       >  2:1160397/1‑150 (MQ=255)
                                                                                                               tCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCcctgtgggagcgggcttgcccgcgaataagccaacacggtatcagcttaaacccaactcaccccagatccgccgcacttcacggcgttcatcggcaaactgtgccgcatcg                                      <  2:689139‑M2/150‑112 (MQ=255)
                                                                                                               tCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATAcctgtgggagcgggcttgcccgcgaataagccaacacggtatcagcttaaacccaactcaccccagatccgccgcacttcacggcgttcatcggcaaactgtgccgcatcg                                      <  1:916388‑M2/150‑112 (MQ=255)
                                                                                                                  cacaGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGGACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGa                                  >  1:1397390/1‑150 (MQ=255)
                                                                                                                   acgGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCcctgtgggagcgggcttgcccgcgaataagccaacacggtatcagcttaaacccaactcaccccagatccgccgcacttcacggcgttcatcggcaaactgtgccgcatcgatca                                  <  1:1938505‑M2/150‑116 (MQ=255)
                                                                                                                   acaGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAg                                                                                                                       <  1:824437/64‑1 (MQ=255)
                                                                                                                   acaGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAg                                                                                                                       >  2:824437/1‑64 (MQ=255)
                                                                                                                   acaGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAg                                 >  2:1933755/1‑150 (MQ=255)
                                                                                                                    aatgcgcTGGACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGc                                <  2:1378535/144‑1 (MQ=255)
                                                                                                                           tGCACAG‑GCACTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCGTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATCTAATGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTg                         <  1:630148/150‑1 (MQ=255)
                                                                                                                             cacaG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGa                       <  2:22945/150‑1 (MQ=255)
                                                                                                                              acaG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATTCAGCCGCCTGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTgggc                      <  1:1020095/150‑3 (MQ=255)
                                                                                                                              acaG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGAc                      <  1:1933755/150‑1 (MQ=255)
                                                                                                                              acaG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGAc                      >  1:508215/1‑150 (MQ=255)
                                                                                                                                aG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAgg                                                             <  2:928302/109‑1 (MQ=255)
                                                                                                                                aG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAgg                                                             >  1:928302/1‑109 (MQ=255)
                                                                                                                                 g‑gCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTaa                   <  1:1449589/150‑1 (MQ=255)
                                                                                                                                   gCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAg                  >  2:540580/1‑150 (MQ=255)
                                                                                                                                        gAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGACATTTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATga             >  1:931175/1‑150 (MQ=255)
                                                                                                                                        gAGCAGTGTGCAATAcctgtgggagcgggcttgcccgcgaataagccaacacggtatcagcttaaacccaactcaccccagatccgccgcacttcacggcgttcatcggcaaactgtgccgcatcgatcaccccggcctccttctgcagg              >  2:916388‑M2/1‑15 (MQ=255)
                                                                                                                                           cAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAAtata                                                                             >  2:1086192/1‑83 (MQ=255)
                                                                                                                                           cAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAAtata                                                                             <  1:1086192/83‑1 (MQ=255)
                                                                                                                                                 gCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTGCACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGa    <  1:1521983/150‑1 (MQ=255)
                                                                                                                                                 gCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGa    >  1:749305/1‑150 (MQ=255)
                                                                                                                                                  cAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTcc                                      <  2:169098/115‑1 (MQ=255)
                                                                                                                                                  cAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTcc                                      >  1:169098/1‑115 (MQ=255)
                                                                                                                                                  cAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGAt   >  1:1708982/1‑150 (MQ=255)
                                                                                                                                                   aaTCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATc  >  2:1204784/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                   
CGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAG‑GCCCTGAGCAGTGTGCAATCCCTGTG‑GGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATC  >  NC_002947/413905‑414200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.