New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 562730	45 (0.620)	5 (0.070)	5/232	NT	9.9%	coding (453/621 nt)	rpsD	30S ribosomal protein S4
	?	NC_002947	= 562763	49 (0.720)					coding (486/621 nt)	rpsD	30S ribosomal protein S4

AGTCCCGTCAGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTCTACTCCAAGTAAGGGCTAGAAAATAG  >  NC_002947/562615‑562912                                                                                                                                                     |                                                                                                                                                      aGTCCCGTCAGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCg                                                                                                                                                      >  2:723834‑M2/1‑149 (MQ=255)       gTCAGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCgcccagc                                                                                                                                                >  2:183509‑M2/1‑143 (MQ=255)          aGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTg                                                                                                                                             >  2:1926582/1‑150 (MQ=255)            cTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCGATCCTACCAAGTTCGTCCGGGTGACGTGGTGGTAGATCCCGAGAAATCTCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGc                                                                                                                                           >  1:442353/1‑150 (MQ=255)            cTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGc                                                                                                                                           >  1:1567261/1‑150 (MQ=255)                    gCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGa                                                                                                                                   >  2:659027/1‑150 (MQ=255)                     cacaAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAg                                                                                                                                  <  1:1337952/150‑1 (MQ=255)                        aaaGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTgg                                                                                                                               <  2:819510/150‑1 (MQ=255)                         aaGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTggg                                                                                                                              <  2:1881522/150‑1 (MQ=255)                          aGCGATCAGCGTCGAAGGTGCGACTGTTCAGGCTCGACCTGACCATGTGCTGCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGt                                                                                                                             <  2:211043/150‑1 (MQ=255)                          aGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTTGGCTCCCAGCGTGGCCGCGTTGAGTGGGt                                                                                                                             <  1:544150/150‑1 (MQ=255)                             gATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGCACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGa                                                                                                                          <  2:692044/150‑1 (MQ=255)                                cAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGCTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGt                                                                                                                       <  1:816867/150‑1 (MQ=255)                                 aGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTg                                                                                                                      <  2:1127696/150‑1 (MQ=255)                                    ggcAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCGGGGTGACGTGGTCGCAGTACGCGAGAAATCGCTGGGCCGGTTGCGCATTGTTCAAGCCCTTGAACTGTTCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAt                                                                                                                   >  2:132836/3‑150 (MQ=255)                                          ggTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATgctgct                                                                                                             >  2:263202/1‑150 (MQ=255)                                                          ttCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGttt                                                                                             >  1:1660205/1‑150 (MQ=255)                                                              aTCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgct                                                                                                                <  2:664929/127‑1 (MQ=255)                                                              aTCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgct                                                                                                                >  1:664929/1‑127 (MQ=255)                                                                  tACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCg                                                                                                    <  2:1643682/135‑1 (MQ=255)                                                                  tACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCg                                                                                                    >  1:1643682/1‑135 (MQ=255)                                                                     cAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGt                                                                                                                       >  2:1002682/1‑113 (MQ=255)                                                                     cAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGt                                                                                                                       <  1:1002682/113‑1 (MQ=255)                                                                     cAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGtt                                                                                  >  2:962623/1‑150 (MQ=255)                                                                     cAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGtt                                                                                  >  2:925679/1‑150 (MQ=255)                                                                            gTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgct                                                                                                                <  1:131570/113‑1 (MQ=255)                                                                            gTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgct                                                                                                                >  2:131570/1‑113 (MQ=255)                                                                             tCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgctgc                                                                                                              <  1:107002/114‑1 (MQ=255)                                                                             tCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgctgc                                                                                                              >  2:107002/1‑114 (MQ=255)                                                                                gggTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAg                                                                       <  2:442353/150‑1 (MQ=255)                                                                                    cccGTGGTTGCGGTCCTCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCGTTTCAACTGTTCGCCCAGCGGGGGCGCGTTGAATGGGTTGACGTGCATGCTGATAAAAAGTCGGGCGTGTTCAAGAACGTTCCTGCTCGCAGCGAc                                                                   <  2:200923/148‑1 (MQ=255)                                                                                       gTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgctgc                                                                                                              <  1:890861/104‑1 (MQ=255)                                                                                       gTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgctgc                                                                                                              >  2:890861/1‑104 (MQ=255)                                                                                        tGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGt                                                               <  2:1220860/150‑1 (MQ=255)                                                                                            cGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGc                                                           <  1:263202/150‑1 (MQ=255)                                                                                                    gcgAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCa                                                   <  1:1926582/150‑1 (MQ=255)                                                                                                     cgAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCgcaactggcccagcgatttctcgcggactgcgaccacgtcacccggacgaacttggtaggatg                                                                                        <  2:814572‑M2/112‑64 (MQ=255)                                                                                                     cgAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCgcaactggcccagcgatttctcgcggactgcgaccacgtcacccggacgaacttggtaggatg                                                                                        >  1:814572‑M2/1‑49 (MQ=255)                                                                                                        gaAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCgcccagcgatttctcgcggactgcgaccacgtcacccggacgaacttggtaggatggaatgtttacagtcttaccgttgacgctgatcgctttgtgcgaaacca                                               <  2:562517‑M2/150‑105 (MQ=255)                                                                                                            tCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCgcccagcgatttctcgcggactgcgaccacgtcacccggacgaacttggtaggatggaatgtttacagtcttaccgttgacgctgatcgctttgtgcgaaaccagctg                                           <  1:1607147‑M2/150‑109 (MQ=255)                                                                                                                   gCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTg                                    >  1:85993/1‑150 (MQ=255)                                                                                                                    ccAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGt                                   >  2:956725/1‑150 (MQ=255)                                                                                                                     cAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTc                                  <  2:1660205/150‑1 (MQ=255)                                                                                                                      aGTTGCGCATTGTTCAAGCCCTTGAACTGTGCgcccagcgatttctcgcggactgcgaccacgtcacccggacgaacttggtaggatggaatgtttacagtcttaccgttgacgctgatcgctttgtgcgaaaccagctgacgggactcg                                 >  2:1607147‑M2/1‑32 (MQ=255)                                                                                                                              aTTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgctg                                                                                                               >  2:227314/1‑64 (MQ=255)                                                                                                                              aTTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgctg                                                                                                               <  1:227314/64‑1 (MQ=255)                                                                                                                              aTTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACa                                                      >  2:536308/1‑121 (MQ=255)                                                                                                                              aTTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACa                                                      <  1:536308/121‑1 (MQ=255)                                                                                                                                  ttCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTCTACTCCa                     >  1:346044/1‑150 (MQ=255)                                                                                                                                  ttCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTCTACTCCa                     >  1:397409/1‑150 (MQ=255)                                                                                                                                  ttCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTCTACTCCa                     >  2:1487507/1‑150 (MQ=255)                                                                                                                                   tCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTCTACTCCaa                    <  1:659027/150‑1 (MQ=255)                                                                                                                                   tCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTCTACTCCaa                    <  1:470970/150‑1 (MQ=255)                                                                                                                                     aaGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTCTACTCCaa                    >  2:1310300/1‑148 (MQ=255)                                                                                                                                     aaGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTCTACTCCaa                    <  1:1310300/148‑1 (MQ=255)                                                                                                                                     aaGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTCTACTCCAAGt                  >  2:207138/1‑150 (MQ=255)                                                                                                                                        cccTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTCTACTCCAAGTAAg               <  1:207138/150‑1 (MQ=255)                                                                                                                                          cTTGAACTGTGCGGCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTCTACTCCAAGTAAggg             <  2:1567261/150‑1 (MQ=255)                                                                                                                                                cTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTATACTCCAAGTAAGGGCTAGaa       >  1:32900/1‑150 (MQ=255)                                                                                                                                                   tgCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTCTACTCCAAGTAAGGGCTAGAAAAt    <  1:962623/150‑1 (MQ=255)                                                                                                                                                   tgCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTCTACTCCAAGTAAGGGCTAGAAAAt    >  2:110673/1‑150 (MQ=255)                                                                                                                                                    gcgcCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGct                             >  2:133146/1‑124 (MQ=255)                                                                                                                                                    gcgcCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGct                             <  1:133146/124‑1 (MQ=255)                                                                                                                                                    gcgcCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTCTACTCCAAGTAAGGGCTAGAAAATa   <  1:956725/150‑1 (MQ=255)                                                                                                                                                     cgcCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTCTACTCCAAGTAAGGGCTAGAAAATAg  <  2:397409/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      AGTCCCGTCAGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGTCGAGCTCTACTCCAAGTAAGGGCTAGAAAATAG  >  NC_002947/562615‑562912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.