| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1362765 = | 64 (0.880) | 5 (0.070) | 4/244 | NT | 6.8% | coding (1149/1347 nt) | phoQ | sensor protein |
| ? | NC_002947 | 1362794 = | 75 (1.040) | coding (1178/1347 nt) | phoQ | sensor protein | |||||
AGCAGGGCGCGTTGTTGGAAATGCTCGGCAACCTGCTGGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTGGCGATTCGCCACTGGGGGGCGCTGCGTTCAGG > NC_002947/1362647‑1362942 | aGCAGGGCGCGTTGTTGGAAATGCTCGGCAACCTGCTGGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAgt < 2:1328718/150‑2 (MQ=255) gctcagctcggcgtcatagctgtcgacgatatccttgaccactgccaagccgatgccctgccccgggtgctggctgtccagccgctccccacgctccagaatgcgttcacgctggacgacgggccgggcgtgcccgtcgaccAGCGTGaa < 2:1715106‑M2/8‑1 (MQ=255) gcgTTGTTGGAAATGCTCGGCAACCTGCTGGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGc < 2:270442/150‑1 (MQ=255) ctcagctcggcgtcatagctgtcgacgatatccttgaccactgccaagccgatgccctgccccgggtgctggctgtccagccgctccccacgctccagaatgcgttcacgctggtcgacgggccgggcgtgcccgtcgaccAGCGTGAAc < 2:1017552‑M2/9‑1 (MQ=255) ttgGAAATGCTCGGCAACCTGCTGGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTg > 1:1772980/1‑150 (MQ=255) tGCTCGGCAACCTGCTGGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTg < 2:1283989/150‑1 (MQ=255) cTCGGCAACCTGCTGGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTggg < 2:1772980/150‑1 (MQ=255) tCGGCAACCTGCTGGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTgggg > 1:647592/1‑150 (MQ=255) gctgtcgacgatatccttgaccactgccaagccgatgccctgccccgggtgctggctgtccagccgctccccacgctccagaatgcgttcacgctggacgacgggccgggcgtgcccgtcgaccAGCGTGAACGCATTCTGGAGCGTggg < 2:1376508‑M2/26‑1 (MQ=255) cGGCAACCTGCTGGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGa < 2:531255/150‑1 (MQ=255) ggCAACCTGCTGGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAg < 2:268037/150‑1 (MQ=255) gCAACCTGCTGGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGc > 2:297800/1‑150 (MQ=255) ccTGCTGGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCt > 1:142259/1‑150 (MQ=255) ccTGCTGGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCt < 2:356249/150‑1 (MQ=255) ctgctgGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTg > 2:681436/1‑150 (MQ=255) ctgctgGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTg < 2:906122/150‑1 (MQ=255) ctgctgGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTg < 1:1143573/150‑1 (MQ=255) gctgGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGa < 1:297800/150‑1 (MQ=255) gctgGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGa < 1:774397/150‑1 (MQ=255) gctgGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTAGACCAGCGTGAACTCATTCTGGATCGTGGTTAGCGGCTGGa > 2:17409/1‑150 (MQ=255) agcaCGCCGACCGTCTGAGCCTGGGGCAAGTTCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGAcagcc < 2:1079731/147‑1 (MQ=255) ttgaccactgccaagccgatgccctgccccgggtgctggctgtccagccgctccccacgctccagaatgcgttcacgctggacgacgggccgggcgtgcccgtcgaccAGCGTGAAc > 2:1919537‑M2/109‑117 (MQ=255) ttgaccactgccaagccgatgccctgccccgggtgctggctgtccagccgctccccacgctccagaatgcgttcacgctggacgacgggccgggcgtgcccgtcgaccAGCGTGAAc < 1:1919537‑M2/9‑1 (MQ=255) cTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGAACGCCAGCAgcc > 1:1855438/1‑150 (MQ=255) tACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCg > 1:846582/1‑150 (MQ=255) aCCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCgg < 1:567801/150‑1 (MQ=255) cGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCgggg > 2:113939/1‑150 (MQ=255) cGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCgggg > 1:676272/1‑150 (MQ=255) ggCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGgggc < 2:35693/150‑1 (MQ=255) cTGAGACTGGGCCAAGTCCGGGTGAGCCTGATGAAAGCCCCGGGGTATCTCACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGgggcag < 1:408855/150‑1 (MQ=255) aGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGgggcagggc < 1:522373/150‑1 (MQ=255) gCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGa < 1:899157/127‑1 (MQ=255) gCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGa > 2:899157/1‑127 (MQ=255) ccTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCAt > 1:1622717/1‑150 (MQ=255) ggCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGG‑GCATCGAGGACGATGGGC‑CGGGCGTGCCCGTCGACTAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGc < 2:594433/150‑1 (MQ=255) ccAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCtt < 1:439592/150‑1 (MQ=255) ccAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCtt < 1:439630/150‑1 (MQ=255) ccAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAACGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCtt > 2:1280800/1‑150 (MQ=255) ccAAGTGCGGGTGAGCCTGATGAAAGCGCCGAGGTA‑CTTAATTTATCGCATCGAGGAGGACGGGC‑CGGGCATCAGCTTGAACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCtt < 1:435325/150‑1 (MQ=255) aaGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTgg < 1:1411174/150‑1 (MQ=255) cGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTg < 1:780600/150‑1 (MQ=255) gggTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCACTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTgg > 1:643142/1‑150 (MQ=255) gAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCaa < 2:846582/150‑1 (MQ=255) ccTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGAcagc > 1:467398/1‑109 (MQ=255) ccTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGAcagc < 2:467398/109‑1 (MQ=255) ccTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGa > 2:1809107/1‑150 (MQ=255) gatgaAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGatat > 1:1440024/1‑150 (MQ=255) aaaGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATAtcgtc > 2:1497437/1‑150 (MQ=255) aaaGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATAtcgtc < 2:676272/150‑1 (MQ=255) aaGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTg < 1:1504337/128‑1 (MQ=255) aaGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTg > 2:1504337/1‑128 (MQ=255) cccacgctccagaatgcgttcacgctGGTCGACGGGC‑ACGCCCGGCCCGTCGTCCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGc < 2:1376508‑M1/124‑1 (MQ=255) tCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGGTCCCGTCGACCAGCGTGAACGCATTCTGGAGCGGGGGGAGCCGCACGTCCCTCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCAACGACAGCTATGACgg > 1:1107231/1‑149 (MQ=255) gACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGa > 2:1002909/1‑150 (MQ=255) gACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGa < 1:113939/150‑1 (MQ=255) cTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGAcagcc > 2:938520/1‑83 (MQ=255) cTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGAcagcc < 1:938520/83‑1 (MQ=255) cTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCt < 1:1002909/150‑1 (MQ=255) cTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCt > 1:1277164/1‑150 (MQ=255) gttcacgctGGTCGACGGGCACGCCCG‑GCCCGTCGTCCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCaa < 1:1919537‑M1/108‑1 (MQ=255) gttcacgctGGTCGACGGGCACGCCCG‑GCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAg < 2:1017552‑M1/141‑1 (MQ=255) gttcacgctGGTCGACGGGC‑ACGCCCGGCCCGTCGTCCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCaa > 2:1919537‑M1/10‑117 (MQ=255) ttcacgctGGTCGACGGGCACGCCCG‑GCCCGTCGTCCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGc < 2:1715106‑M1/142‑1 (MQ=255) aTCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCtt < 1:1354332/150‑1 (MQ=255) aTCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCtt < 2:1277164/150‑1 (MQ=255) tCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTg > 1:808353/1‑150 (MQ=255) gAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTGGc > 1:309487/1‑150 (MQ=255) cgacgGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATAtc < 1:349215/112‑1 (MQ=255) cgacgGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATAtc > 2:349215/1‑112 (MQ=255) cgacgGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTGGCGATTc > 1:994654/1‑150 (MQ=255) cgggc‑cgggcGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGa < 1:1217482/123‑1 (MQ=255) cgggc‑cgggcGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGa > 2:1217482/1‑123 (MQ=255) cgggc‑cgggcGTGCCCATCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGCAAGGGCATCCACTTGCCAGTGGACAACCATAGCGTCCCCAGCTATGACACCGAGCTGAGCCTTGGCGATTCGcc > 2:908704/1‑150 (MQ=255) gggc‑cgggcGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGa > 1:696778/1‑50 (MQ=255) gggc‑cgggcGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGa < 2:696778/50‑1 (MQ=255) gc‑cgggcGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGgggcag < 1:878929/76‑1 (MQ=255) gc‑cgggcGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGgggcag > 2:878929/1‑76 (MQ=255) gc‑cgggcGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAgg > 1:1780233/1‑101 (MQ=255) gc‑cgggcGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAgg < 2:1780233/101‑1 (MQ=255) gc‑cgggcGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTGGCGATTCGCCACt > 2:1298796/1‑150 (MQ=255) ggggTGCTCGTGGACCGGCGGGAACGCATTCTGGAGCGTGGGGAGCGGCTGGCCAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTGGCGATTCGCCACTgggg < 2:1855438/147‑1 (MQ=255) gTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTGGCGATTCGCCACTggggggg > 1:769655/1‑149 (MQ=255) cccGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTgg > 1:1487768/1‑128 (MQ=255) cccGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTgg < 2:1487768/128‑1 (MQ=255) cGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTGGCGATTCGCCACTGGGGGGCGCTGc < 1:1497437/150‑1 (MQ=255) cGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTGGCGATTCGCCACTGGGGGGCGCTGc < 1:681436/150‑1 (MQ=255) tccAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTGGCGATTCGCCACTGGGGGGCGCTGCGTTCa < 1:1715106‑M2/147‑1 (MQ=255) tccAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTGGCGATTCGCCACTGGGGGGCGCTGCGTTCa < 1:1376508‑M2/147‑1 (MQ=255) aCCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTGGCGATTCGCCACTGGGGGGCGCTGCGTTCa < 2:142259/150‑1 (MQ=255) ccAGCGTGAACGCATTCTGGAGCGTGGGTAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTGGCGATTCGCCACTGGGGGGCGCTGCGTTCAg < 1:17409‑M2/148‑1 (MQ=255) ccAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGTCAGGGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTGGCGATTCGCCACTGGGGGGCGCTGCGTTCAg < 2:647592‑M2/148‑1 (MQ=255) cAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGc < 1:296323‑M2/108‑1 (MQ=255) cAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGc > 2:296323‑M2/2‑109 (MQ=255) cAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTGGCGATTCGCCACTGGGGGGCGCTGCGTTCAgg > 1:331393‑M2/2‑150 (MQ=255) | AGCAGGGCGCGTTGTTGGAAATGCTCGGCAACCTGCTGGAGAACGCCTACCGGCTGAGCCTGGGCCAAGTGCGGGTGAGCCTGATGAAAGCGCCGGGGTATCTGACCTTGT‑GCATCGAGGACGACGGGC‑CGGGCGTGCCCGTCGACCAGCGTGAACGCATTCTGGAGCGTGGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGCATCGGCTTGGCAGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTTGGCGATTCGCCACTGGGGGGCGCTGCGTTCAGG > NC_002947/1362647‑1362942 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |