New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1602098 =	79 (1.080)	4 (0.060) +TGCACCGCAGTGCTTGC	4/214	NT	6.3%	intergenic (+69/‑98)	PP_1404/PP_5469	hypothetical protein/SAM‑dependent methyltransferase
	?	NC_002947	= 5594170	60 (0.820)					intergenic (‑66/+79)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase

AGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGC  >  NC_002947/5594022‑5594310                                                                                                                                                       |                                                                                                                                             aGTGAAAACAGGTCGCGAGCACCGAAAATGAGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAAg                                                                                                                                             <  1:678829‑M2/150‑2 (MQ=255)   tGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAacac                                                                                                                                           >  1:772988/1‑150 (MQ=255)     aaaaCAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCg                                                                                                                                         <  1:272963/150‑1 (MQ=255)       aaCAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGc                                                                                                                                       >  1:600561/1‑150 (MQ=255)              cgcgAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCg                                                                                                                                <  1:774497/150‑1 (MQ=255)                     aCCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCAt                                                                                                                         >  2:1512764/1‑150 (MQ=255)                        gAATATGCGCTGCTGGATGGGTGTTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCa                                                                                                                      <  2:1567377/150‑1 (MQ=255)                           aaTGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCg                                                                                                                   <  1:817144/150‑1 (MQ=255)                             tGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCa                                                                                                                 <  1:1595433/150‑1 (MQ=255)                             tGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCa                                                                                                                 <  1:1441493/150‑1 (MQ=255)                                  tgctgGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGtgct                                                                                                            >  1:1142006/1‑150 (MQ=255)                                    tgttaTGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGtgcttg                                                                                                          <  2:600561/146‑1 (MQ=255)                                            ggATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACATC‑‑ACCATGTGGGAGCGGGCTTGCCCTGTAACACCGGCAAAGCCTGTGCCATGCACCGCAGTGCTTGCTTCGCgg                                                                                                  <  1:36562/150‑1 (MQ=255)                                            ggATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAAgcaagcactgcggtgcatggcaccggctttgccggtgttcgcgg                                                                                                  >  2:829554‑M2/1‑106 (MQ=255)                                            ggATTGGATGGTCGGGAGAGAACTGGCTGAGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGTCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCgg                                                                                                  <  2:338001/150‑1 (MQ=255)                                               ttGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGGGATGTTAAGTGGCGTACACC‑‑ACCCTGTGGGCTTACGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGATTGCTGCGCGGGCa                                                                                               >  1:137470/1‑150 (MQ=37)                                                tGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCaa                                                                                              <  2:1033937/150‑1 (MQ=255)                                                            agagaACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAAgcaagcactgcggtgcatggcaccggctttgccggtgttcgcgggcaagcccgctcccac                                                                                  >  2:678829‑M2/1‑90 (MQ=255)                                                                aaCTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAggg                                                                              >  2:1093966/1‑150 (MQ=255)                                                                  ctggctggGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTAGCGGGCAAGCCCGCTCCCACAGGGTa                                                                            >  1:1531744/1‑150 (MQ=255)                                                                     gctggGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCg                                                                                                                                         <  1:73587/86‑1 (MQ=255)                                                                     gctggGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCg                                                                                                                                         >  2:73587/1‑86 (MQ=255)                                                                       tggGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCg                                                                                                                                         >  2:734354/1‑84 (MQ=255)                                                                       tggGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCg                                                                                                                                         <  1:734354/84‑1 (MQ=255)                                                                         ggTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCAG‑CACCTTACCCTGTGGGAGCGGGCTTGCCCGCGAAgcaagcactgcggtgcatggcaccggctttgccggtgttcgcgggcaagcccgctc                                                                                      >  2:106009‑M2/1‑78 (MQ=255)                                                                         ggTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCAG‑CACCTTACCCTGTGGGAGCGGGCTTGCCCGCGAAgcaagcactgcggtgcatggcaccggctttgccggtgttcgcgggcaagcccgctc                                                                                      <  1:106009‑M2/134‑57 (MQ=255)                                                                                 catggtcatgTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCgg                                                                                                  <  2:238957/113‑1 (MQ=255)                                                                                 catggtcatgTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCgg                                                                                                  >  1:238957/1‑113 (MQ=255)                                                                                  atggtcatgTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAg                                                            >  1:515993/1‑150 (MQ=255)                                                                                     gtcatgTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACt                                                         <  1:450687/150‑1 (MQ=255)                                                                                      tcatgTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTACGGTCCGTCGCATTAGACtt                                                        >  2:1505138/1‑150 (MQ=25)                                                                                      tcatgTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACtt                                                        >  1:1100324/1‑150 (MQ=255)                                                                                          gTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTtgtg                                                    <  2:1142006/150‑1 (MQ=255)                                                                                              gCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTAc                                                >  2:946912/1‑150 (MQ=255)                                                                                                  gagagaTGTTAAGTGGCATACACG‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCGGTGCCCTGCACCGCAGTGCTTGCTTCCCGGGCAAGCCCGCTCCCCCCGCGTACCGTGCTGCGCTTTAGACTTTCTGGTACAgct                                            >  2:911734/1‑150 (MQ=25)                                                                                                  gAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgct                                            >  1:505918/1‑150 (MQ=255)                                                                                                  gAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgct                                            >  2:1122143/1‑150 (MQ=255)                                                                                                    gTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCATGGCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctgg                                          <  1:1505138/150‑1 (MQ=255)                                                                                                    gTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctgg                                          <  2:137470/150‑1 (MQ=255)                                                                                                     tGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTa                                                             <  1:1548885/130‑1 (MQ=255)                                                                                                     tGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTa                                                             >  2:1548885/1‑130 (MQ=255)                                                                                                       aTGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctggctg                                       >  2:1217707/1‑150 (MQ=255)                                                                                                       aTGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTGGCCCGCGAACACCGGCAAAGCCGGTGCCATGCAGCGCAGTGCTTGCTTCGCGGGCAAGTCCGCTCCAACAGTGCAAGGTGGTGCGGTTTAGGCTTTTTGGTACAgctggcta                                       >  1:1566640/1‑149 (MQ=25)                                                                                                        tGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGc                                      <  2:515993/150‑1 (MQ=255)                                                                                                         tttAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGcc                                     <  2:1731294/149‑1 (MQ=255)                                                                                                            aaGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTc                                  <  1:1093966/150‑1 (MQ=255)                                                                                                              gTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGtgcttg                                                                                                          <  1:1122694/76‑1 (MQ=255)                                                                                                              gTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGtgcttg                                                                                                          >  2:1122694/1‑76 (MQ=255)                                                                                                              gTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCt                                <  1:1217707/150‑1 (MQ=255)                                                                                                              gTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCt                                <  1:387629/150‑1 (MQ=255)                                                                                                                ggCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCTCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTgg                              <  1:1009535/150‑1 (MQ=255)                                                                                                                ggCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTgg                              <  1:1122143/150‑1 (MQ=255)                                                                                                                         c‑‑accCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctggct                                        <  1:636520/131‑1 (MQ=255)                                                                                                                         c‑‑accCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctggct                                        >  2:636520/1‑131 (MQ=255)                                                                                                                         c‑‑accCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGc                     >  2:1888798/1‑150 (MQ=255)                                                                                                                              ccTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCg                  <  2:772988/150‑1 (MQ=255)                                                                                                                              ccTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCg                  <  1:1512764/150‑1 (MQ=255)                                                                                                                                      aGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTc          <  2:505918/150‑1 (MQ=255)                                                                                                                                         gggCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACg       >  2:1668168/1‑150 (MQ=255)                                                                                                                                          ggCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctggct                                        >  2:1635708/1‑116 (MQ=255)                                                                                                                                          ggCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctggct                                        <  1:1635708/116‑1 (MQ=255)                                                                                                                                          ggCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGc      >  1:475870/1‑150 (MQ=255)                                                                                                                                          ggCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGc      <  2:1100324/150‑1 (MQ=255)                                                                                                                                             ttGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATg   >  1:1379979/1‑150 (MQ=255)                                                                                                                                             ttGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCGCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATg   >  2:1396519/1‑150 (MQ=255)                                                                                                                                                 ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTtgt                                                     >  2:593842/1‑96 (MQ=255)                                                                                                                                                 ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTtgt                                                     <  1:593842/96‑1 (MQ=255)                                                                                                                                                 ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGc                             >  1:1175277/1‑120 (MQ=255)                                                                                                                                                 ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGc                             <  2:1175277/120‑1 (MQ=255)                                                                                                                                                 ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGc  >  1:1329152/1‑147 (MQ=255)                                                                                                                                                 ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGc  <  2:1329152/147‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                             AGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACC‑‑ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGC  >  NC_002947/5594022‑5594310

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.