New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 180037167 (0.920)4 (0.060) 4/236 NT 5.6% coding (313/3525 nt) dnaEA DNA polymerase III subunit alpha
?NC_002947 = 1800401 71 (1.020)coding (343/3525 nt) dnaEA DNA polymerase III subunit alpha

ACCTGTGGCTGGCCGGTGCCGACCCGGAAGCCCCGCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTCCCCGA  >  NC_002947/1800261‑1800546
                                                                                                                                            |                                                                                                                                                 
aCCTGTGGCTGGCCGGTGCCGACCCGGAAGCCCCGCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTg                                                                                                                                          >  1:1842612/1‑150 (MQ=255)
   tgtgGCTGGCCGGTGCCGACCCGGAAGCCCCGCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAAt                                                                                                                                       >  1:152372/1‑150 (MQ=255)
   tgtgGCTGGCCGGTGCCGACCCGGAAGCCCCGCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAAt                                                                                                                                       <  1:1599974/150‑1 (MQ=255)
               gTGCCGACCCGGAAGCCCCGCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCgg                                                                                                                           <  2:1428400/150‑1 (MQ=255)
                   cGACCCGGAAGCCCCGCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAg                                                                                                                       >  1:947713/1‑150 (MQ=255)
                    gACCCGGAAGCCCCGCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGc                                                                                                                      >  2:27908/1‑150 (MQ=255)
                       ccGGAAGCCCCGCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAg                                                                                                                   >  2:44709/1‑150 (MQ=255)
                       ccGGAAGCCCCGCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAg                                                                                                                   <  1:1810427/150‑1 (MQ=255)
                        cGGAAGCCCCGCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGNCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAgg                                                                                                                  >  1:1340334/1‑150 (MQ=255)
                        cGGAAGCCCCGCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAgg                                                                                                                  >  1:743479/1‑150 (MQ=255)
                            aGCCCCGCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGTGCCt                                                                                                              <  1:1415973/150‑1 (MQ=255)
                                  gCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGc                                                                                                        <  2:790461/150‑1 (MQ=255)
                                  ccTGTCGCGCATCTGCTGCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGc                                                                                                        <  2:1340334/149‑1 (MQ=255)
                                   cTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGcc                                                                                                       <  1:177148/150‑1 (MQ=255)
                                   cTGTCGCGCATCTGCTTCCGGGCTATGGACCCCATGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGcc                                                                                                       <  2:1276442/150‑1 (MQ=255)
                                     gTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCt                                                                                                     <  2:889807/150‑1 (MQ=255)
                                        gcgcATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGa                                                                                                            <  1:974298/140‑1 (MQ=255)
                                        gcgcATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGa                                                                                                            >  2:974298/1‑140 (MQ=255)
                                        gcgcATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTc                                                                                                  >  2:1762436/1‑150 (MQ=255)
                                        gcgcATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTc                                                                                                  >  1:1641700/1‑150 (MQ=255)
                                             tCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCgg                                                                                             <  2:470375/150‑1 (MQ=255)
                                             tCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCgg                                                                                             <  2:1901914/150‑1 (MQ=255)
                                                  ttCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCaag                                                                                        <  1:26005/150‑1 (MQ=255)
                                                    ccTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCaagga                                                                                      >  1:498515/1‑150 (MQ=255)
                                                        gCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGc                                                                                  <  1:533974/150‑1 (MQ=255)
                                                         gcATGGACCCCAAGGGCTATCGCAACCTCACTGAACTGATGTCGCCCGGCTGGACCAATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTTAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGCGCAAGGAAGGCg                                                                                 >  2:254153/2‑150 (MQ=255)
                                                         ccATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCg                                                                                 >  1:1786592/1‑150 (MQ=255)
                                                         ccATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCg                                                                                 >  1:1895500/1‑150 (MQ=255)
                                                          cATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGa                                                                                >  2:1815290/1‑150 (MQ=255)
                                                             ggACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACAt                                                                             >  2:157839/1‑150 (MQ=255)
                                                              gACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACAtt                                                                            <  1:27908/150‑1 (MQ=255)
                                                               aCCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTg                                                                           <  1:1309806/150‑1 (MQ=255)
                                                                 cccAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGTACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGc                                                                         >  1:1632100/1‑150 (MQ=255)
                                                                   cAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCACGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACaagatcgg                                                                       >  1:1868643/1‑143 (MQ=255)
                                                                    aaGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGTACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATg                                                                      <  2:1632100/150‑1 (MQ=255)
                                                                        gCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGgcgc                                                                  >  2:388121/1‑150 (MQ=255)
                                                                                aaCCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCtccagccgcgcgagatcagttcggtgaggttgcgatagcccttggggtccatggccaggaa                                                                                      <  1:1025684‑M2/122‑62 (MQ=255)
                                                                                aaCCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCtccagccgcgcgagatcagttcggtgaggttgcgatagcccttggggtccatggccaggaa                                                                                      >  2:1025684‑M2/1‑61 (MQ=255)
                                                                                 aCCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTggcgg                                                         <  2:757154/150‑1 (MQ=255)
                                                                                     cACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTggcggggcg                                                     <  1:157839/150‑1 (MQ=255)
                                                                                         gAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCa                                                                        >  2:185815/1‑127 (MQ=255)
                                                                                         gAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCa                                                                        <  1:185815/127‑1 (MQ=255)
                                                                                           aCTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGTCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCCAGGGCCTGATAGCCCTGTCCTCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGa                                               <  1:103031/150‑1 (MQ=255)
                                                                                             tggtctcGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGcccc                                                                                                                             >  1:1937640/4‑70 (MQ=255)
                                                                                             tGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGcccc                                                                                                                             <  2:1937640/70‑1 (MQ=255)
                                                                                             tGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCTACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGAcg                                             >  2:1701240/1‑150 (MQ=255)
                                                                                               aTCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGAcgaa                                           <  1:55520/150‑1 (MQ=255)
                                                                                                tctcGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGAcgaag                                          >  1:569328/1‑150 (MQ=255)
                                                                                                 ctcGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGAcgaagc                                         <  2:1641700/150‑1 (MQ=255)
                                                                                                  tcGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGAcgaagcc                                        <  1:1762436/150‑1 (MQ=255)
                                                                                                  tcGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGAcgaagcc                                        >  2:848361/1‑150 (MQ=255)
                                                                                                    gcgcgGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCtccagccgcgcgagatcagttcggtgaggttgcgatagcccttggggtccatggccaggaagcagatgcgcgacagcggggcttccgggtc                                                        >  2:1002145‑M2/1‑41 (MQ=255)
                                                                                                    gcgcgGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCtccagccgcgcgagatcagttcggtgaggttgcgatagcccttggggtccatggccaggaagcagatgcgcgacagcggggcttccgggtc                                                        <  1:1002145‑M2/132‑92 (MQ=255)
                                                                                                      gcgGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCgct                                                                 <  2:105042/121‑1 (MQ=255)
                                                                                                      gcgGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCgct                                                                 >  1:105042/1‑121 (MQ=255)
                                                                                                         gCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAgcgc                                 <  2:947713/150‑1 (MQ=255)
                                                                                                                cGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAgcgc                                 <  2:14361/143‑1 (MQ=255)
                                                                                                                cGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAgcgc                                 >  1:14361/1‑143 (MQ=255)
                                                                                                                cGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCa                          >  1:1733204/1‑150 (MQ=255)
                                                                                                                      ccAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGAc                                              >  1:639686/1‑124 (MQ=255)
                                                                                                                      ccAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGAc                                              <  2:639686/124‑1 (MQ=255)
                                                                                                                        aGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGa                  >  1:1109219/1‑150 (MQ=255)
                                                                                                                        aGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGa                  <  2:569328/150‑1 (MQ=255)
                                                                                                                           gcAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATgg               <  1:1536246/150‑1 (MQ=255)
                                                                                                                            cAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATggg              >  1:1246969/1‑150 (MQ=255)
                                                                                                                             aaTGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGc             <  1:180060/150‑1 (MQ=255)
                                                                                                                              aTGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGc                                                                                  <  2:623126/80‑1 (MQ=255)
                                                                                                                              aTGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGc                                                                                  >  1:623126/1‑80 (MQ=255)
                                                                                                                               tGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCAt           <  2:743479/150‑1 (MQ=255)
                                                                                                                                 gCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGt         >  2:1031595/1‑150 (MQ=255)
                                                                                                                                   cTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCaa                         <  1:665269/132‑1 (MQ=255)
                                                                                                                                   cTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCaa                         >  2:665269/1‑132 (MQ=255)
                                                                                                                                   cTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTc       >  2:654981/1‑150 (MQ=255)
                                                                                                                                    tGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTcc      <  2:1895500/150‑1 (MQ=255)
                                                                                                                                     ggTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCTACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTccc     <  1:1701240/150‑1 (MQ=255)
                                                                                                                                     ggTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTccc     <  1:388121/150‑1 (MQ=255)
                                                                                                                                        cATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTCCCCGa  <  2:1733204/150‑1 (MQ=255)
                                                                                                                                           cctccAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATg                >  2:312825/1‑133 (MQ=255)
                                                                                                                                           cctccAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATg                <  1:312825/133‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                                 
ACCTGTGGCTGGCCGGTGCCGACCCGGAAGCCCCGCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGGCCAGCGAGGGCCTGATTGCCCTGTCCGCGGGCAAGGAAGGCGACATTGGCATGGCGCTGCTGGCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTCCCCGA  >  NC_002947/1800261‑1800546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.