New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 2274386100 (1.370)5 (0.070) 4/238 NT 5.0% coding (24/1041 nt) PP_2004 AraC family transcriptional regulator
?NC_002947 = 2274398 94 (1.340)coding (12/1041 nt) PP_2004 AraC family transcriptional regulator

Only 100 of 109 total aligned reads displayed.

GACAGGCGTGCGCCGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGTTCCCAGAACTGCCCGCGCATGAACACGCTCATGC  >  NC_002947/2274255‑2274544
                                                                                                                                               |                                                                                                                                                   
gACAGGCGTGCGCCGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGgggcgg                                                                                                                                               >  1:516275/1‑150 (MQ=255)
gACAGGCGTGCGCCGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGgggcgg                                                                                                                                               <  1:780851/150‑1 (MQ=255)
gACAGGCGTGCGCCGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGgggcgg                                                                                                                                               <  1:132559/150‑1 (MQ=255)
gACAGGCGTGCGCCGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTACGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGgggcgg                                                                                                                                               <  2:1252953/150‑1 (MQ=255)
 aCAGGCGTGCGCCGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGgggcggg                                                                                                                                              <  2:1220683/150‑1 (MQ=255)
 aCAGGCGTGCGCCGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGgggcggg                                                                                                                                              >  1:1467585/1‑150 (MQ=255)
     gCGTGCGCCGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCAt                                                                                                                                          >  2:326447/1‑150 (MQ=255)
      cGTGCGCCGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATg                                                                                                                                         <  2:834722/150‑1 (MQ=255)
       gTGCGCCGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATgg                                                                                                                                        <  1:1293731/150‑1 (MQ=255)
       gTGCGCCGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATgg                                                                                                                                        <  2:1582171/150‑1 (MQ=255)
       gTGCGCCGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATgg                                                                                                                                        <  2:1361602/150‑1 (MQ=255)
         gggtcGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGGTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGGTGGACAAAACTAACCGACAGTTCGCCCATGCGCACGCGGGGGCGGGCCATGGGt                                                                                                                                      <  1:189984/146‑1 (MQ=255)
            ccGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATgg                                                                                                                                        >  1:286231/1‑145 (MQ=255)
            ccGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATgg                                                                                                                                        <  2:286231/145‑1 (MQ=255)
             cGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCAt                                                                                                                                          >  1:290378/1‑142 (MQ=255)
             cGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCAt                                                                                                                                          <  2:290378/142‑1 (MQ=255)
              ggCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACa                                                                                                                                 >  1:644570/1‑150 (MQ=255)
               gCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACaa                                                                                                                                >  1:1160913/1‑150 (MQ=255)
                 ttCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAAcc                                                                                                                              >  2:170248/1‑150 (MQ=255)
                 ttCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAAcc                                                                                                                              >  1:1875926/1‑150 (MQ=255)
                     cTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACcacac                                                                                                                          >  1:1941029/1‑150 (MQ=255)
                      tCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACcacaca                                                                                                                         >  1:1338149/1‑150 (MQ=255)
                        aGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACAtt                                                                                                                       >  1:1612823/1‑150 (MQ=255)
                        aGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACAtt                                                                                                                       >  2:1637568/1‑150 (MQ=255)
                          gCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCa                                                                                                                     >  1:85981/1‑150 (MQ=255)
                            gggTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAAc                                                                                                                   <  2:1612823/150‑1 (MQ=255)
                               tCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCATGCGCACGCGGGGGCGGGCCATGGGTTTACAAc                                                                                                                               <  1:1609960/135‑1 (MQ=255)
                                 gcgTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAggcg                                                                                                              >  1:810062/1‑150 (MQ=255)
                                  gggccAGGCCGTAGCGGCGCAGCAATGGTCAAGCCTCGTTGCCCAGCTCGCGCAGGGCGTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAggcgg                                                                                                             <  2:941924/147‑1 (MQ=255)
                                      cAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGgcgc                                                                                                         <  1:1637568/150‑1 (MQ=255)
                                       aGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGcc                                                                                                        >  2:1029541/1‑150 (MQ=255)
                                         gCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCctg                                                                                                      <  2:1939329/150‑1 (MQ=255)
                                         gCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCctg                                                                                                      <  2:1338149/150‑1 (MQ=255)
                                          ccGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCctgg                                                                                                     >  1:1502253/1‑150 (MQ=255)
                                                cggcgCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCctgggct‑ggg                                                                                              <  2:1745186/150‑1 (MQ=255)
                                                 ggcgCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑gggg                                                                                             <  2:1160913/150‑1 (MQ=255)
                                                 ggcgCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑gggg                                                                                             <  2:644355/150‑1 (MQ=255)
                                                 ggcgCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑gggg                                                                                             >  2:679411/1‑150 (MQ=255)
                                                  gcgcAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑ggggg                                                                                            >  2:651734/1‑150 (MQ=255)
                                                       gcaATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑ggggg                                                                                            <  1:32831/145‑1 (MQ=255)
                                                       gcaATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑ggggg                                                                                            >  2:32831/1‑145 (MQ=255)
                                                        caATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCctgggct‑gg                                                                                               >  1:1167831/1‑141 (MQ=255)
                                                        caATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCctgggct‑gg                                                                                               <  2:1167831/141‑1 (MQ=255)
                                                          aTGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCggga                                                                                    <  1:1722740/150‑3 (MQ=255)
                                                          aTGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCg                                                                                    >  2:1702357/1‑150 (MQ=255)
                                                           tGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGa                                                                                   <  2:1941029/150‑1 (MQ=255)
                                                           tGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGa                                                                                   <  2:644570/150‑1 (MQ=255)
                                                                cAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAAc                                                                              >  2:1857186/1‑150 (MQ=255)
                                                                cAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAAc                                                                              <  2:516275/150‑1 (MQ=255)
                                                                 aGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCTCCTGGGCTGGGGGGGGCCGGCGAGCAAc                                                                              <  1:1563499/150‑1 (MQ=255)
                                                                 aGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑gggggg                                                                                           >  1:1120607/1‑136 (MQ=255)
                                                                 aGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑gggggg                                                                                           <  2:1120607/136‑1 (MQ=255)
                                                                  gggTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGc                                                                            >  1:1882034/1‑150 (MQ=255)
                                                                       gTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACCACCACACATTCAACAGGAGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCg                                                                       >  1:808415/1‑150 (MQ=255)
                                                                       gTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGcc                                                                                        >  1:183726/1‑133 (MQ=255)
                                                                       gTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGcc                                                                                        <  2:183726/133‑1 (MQ=255)
                                                                           cccAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGCCTTTGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTg                                                                   <  1:821094/150‑1 (MQ=255)
                                                                            ccAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTgg                                                                  >  1:1464238/1‑150 (MQ=255)
                                                                             cAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCTCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGc                                                                 <  1:1478664/150‑1 (MQ=255)
                                                                             cAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCctgggct‑gg                                                                                               >  2:1649590/1‑120 (MQ=255)
                                                                             cAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCctgggct‑gg                                                                                               <  1:1649590/120‑1 (MQ=255)
                                                                               gCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGa                                                               >  1:1323010/1‑150 (MQ=255)
                                                                                       aGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGggg                                                                                                                                                  <  2:12125‑M2/60‑4 (MQ=255)
                                                                                       aGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGggg                                                                                                                                                  >  1:12125‑M2/1‑57 (MQ=255)
                                                                                                cTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAAc                                                                                                                               <  1:1153181/70‑1 (MQ=255)
                                                                                                cTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAAc                                                                                                                               >  2:1153181/1‑70 (MQ=255)
                                                                                                 tCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCctgggct‑gg                                                                                               >  1:129103/1‑100 (MQ=255)
                                                                                                 tCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCctgggct‑gg                                                                                               <  2:129103/100‑1 (MQ=255)
                                                                                                     aGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGc                                         <  1:1702357/150‑1 (MQ=255)
                                                                                                        cTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCt                                      <  2:746658/150‑1 (MQ=255)
                                                                                                        cTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCt                                      >  2:729065/1‑150 (MQ=255)
                                                                                                           gACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGtt                                   <  2:1882034/150‑1 (MQ=255)
                                                                                                            aCAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGTTc                                  >  1:197788/1‑150 (MQ=255)
                                                                                                              aaaaCCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGTTccc                                >  1:966219/1‑150 (MQ=255)
                                                                                                              aaaaCCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGTTccc                                <  2:1502253/150‑1 (MQ=255)
                                                                                                               aaaCCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGTTCCCa                               <  2:966219/150‑1 (MQ=255)
                                                                                                                aaccaaccGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGTTCCCAg                              >  2:206992/1‑150 (MQ=255)
                                                                                                                   caaccGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAAc                                                                                                                               <  1:52682/51‑1 (MQ=255)
                                                                                                                   caaccGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAAc                                                                                                                               >  2:52682/1‑51 (MQ=255)
                                                                                                                    aaccGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAggc                                                                                                               <  2:826073/66‑1 (MQ=255)
                                                                                                                    aaccGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAggc                                                                                                               >  1:826073/1‑66 (MQ=255)
                                                                                                                       cGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGcc                                        >  2:1652401/1‑133 (MQ=255)
                                                                                                                       cGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGcc                                        <  1:1652401/133‑1 (MQ=255)
                                                                                                                       cGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGTTCCCAGAACTGcc                       <  1:651734/150‑1 (MQ=255)
                                                                                                                       cGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCACTGTTCCCAGAACTGcc                       <  2:877579/150‑1 (MQ=255)
                                                                                                                        gACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGTTCCCAGAACTGccc                      >  1:997903/1‑150 (MQ=255)
                                                                                                                        gACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGTTCCCAGAACTGccc                      >  2:493739/1‑150 (MQ=255)
                                                                                                                         aCAGTTCGCCCAGGCGCACGCGGgggcgaactgtcggttggttttgtccagcctttgagcgaagccctgcgcgagctgggccacgaccctgaaccattgctgcgccgctacggcctggacgcgacccgcctgagcgaagccggcgcacgc                      <  2:1267987‑M2/150‑128 (MQ=255)
                                                                                                                         aCAGTTCGCCCAGGCGCACGCGGgggcgaactgtcggttggttttgtccagcctttgagcgaagccctgcgcgagctgg                                                                                             <  1:1450459‑M2/79‑57 (MQ=255)
                                                                                                                         aCAGTTCGCCCAGGCGCACGCGGgggcgaactgtcggttggttttgtccagcctttgagcgaagccctgcgcgagctgg                                                                                             >  2:1450459‑M2/1‑23 (MQ=255)
                                                                                                                         aCAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCACCGGTCCTGTAGGGCGATCAAAGCCCTGGCCATCGCTGCCCTGTTCCCAGAACTGCCcg                     >  2:51011/1‑150 (MQ=255)
                                                                                                                         aCAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGTTCCCAGAACTGCCcg                     >  2:1430090/1‑150 (MQ=255)
                                                                                                                          cAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCCAGCACCGCCCTGGCCATCTCTGCCCTGTTCCCAGAACTGCCcgc                    <  2:1875926/150‑1 (MQ=255)
                                                                                                                            gTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGTTCCCAGAACTGCCCgcgc                  >  1:1041709/1‑150 (MQ=255)
                                                                                                                             ttCGCCCAGGCGCACGCGGgggcgaactgtcggttggttttgtccagccttt                                                                                                                    <  1:132544‑M2/52‑34 (MQ=255)
                                                                                                                             ttCGCCCAGGCGCACGCGGgggcgaactgtcggttggttttgtccagccttt                                                                                                                    >  2:132544‑M2/1‑19 (MQ=255)
                                                                                                                             ttCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGTTCCCAGAACTGCCCGCGCa                 <  1:170248/150‑1 (MQ=255)
                                                                                                                                        gcACGCGGGGGCGGGCCAGGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGTTTCCAGAACTGCCCGCGCATGAACACGCTc      <  1:730505/150‑1 (MQ=255)
                                                                                                                                          aCGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGTTCCCAGAACTGCCCGCGCATGAACACGCTCAt    >  2:1601342/1‑150 (MQ=255)
                                                                                                                                            gcgGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGTTCCCAGAACTGCCCGCGCATGAACACGCTCAtgt  <  2:1041709/150‑2 (MQ=255)
                                                                                                                                               |                                                                                                                                                   
GACAGGCGTGCGCCGGCTTCGCTCAGGCGGGTCGCGTCCAGGCCGTAGCGGCGCAGCAATGGTTCAGGGTCGTGGCCCAGCTCGCGCAGGGCTTCGCTCAAAGGCTGGACAAAACCAACCGACAGTTCGCCCAGGCGCACGCGGGGGCGGGCCATGGGTTTACAACCACACATTCAACAGGCGGGCGCCTGGGCT‑GGGGGGGCCGGCGAGCAACGCTCCCGACTGGCGAGCAAAGCCCTGGCCATCGCTGCCCTGTTCCCAGAACTGCCCGCGCATGAACACGCTCATGC  >  NC_002947/2274255‑2274544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.