New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4140927 =	57 (0.780)	3 (0.040)	3/234	NT	5.3%	coding (511/597 nt)	PP_5609	hypothetical protein
	?	NC_002947	4140960 =	53 (0.770)					coding (544/597 nt)	PP_5609	hypothetical protein

CAGATCCCGATGATGCAGAAGGACGACGAAGGCCTGCGTTCGCACTACATCACCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGACCTTCAAGGAGCGCCCTCCATGATTCAGCCTGTCGCTGAACGCACAC  >  NC_002947/4140813‑4141109                                                                                                                                                     |                                                                                                                                                      cAGATCCCGATGATGCAGAAGGACGACGAAGGCCTGCGTTCGCACTACATCACCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAAc                                                                                                                                                     >  2:1304461/1‑150 (MQ=255)         gatgatGCAGAAGGACGACGAAGGCCTGCGTTCGCACTACATCACCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACAt                                                                                                                                             <  1:293606/150‑1 (MQ=255)                  gAAGGACGACGAAGGCCTGCGTTCGCACTACATCACCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GTGGCCGCCTGCACCCGCGCATCGGCAACCGTTAc                                                                                                                                               <  1:745326/139‑1 (MQ=255)                  gAAGGACGACGAAGGCCTGCGTTCGCACTACATCACCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GTGGCCGCCTGCACCCGCGCATCGGCAACCGTTAc                                                                                                                                               >  2:745326/1‑139 (MQ=255)                  gAAGGACGACGAAGGCCTGCGTTCGCACTACATCACCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGga                                                                                                                                    >  1:1558966/1‑150 (MQ=255)                    aGGACGACGAAGGCCTGCGTTCGCACTACATCACCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGgaag                                                                                                                                  <  2:303268/150‑1 (MQ=255)                           taagcacgccacgccccggcccgtcttggttgttgttattgagcgttggctttttcggcagccagttcttccaggtcgatgtaacggttgccgatggcggccgcctgcacccgcgcatcggcAACCGTTACATCGACCTGGAAGAACTgg                                                                                                                            <  1:110254‑M2/28‑1 (MQ=255)                            gaAGGCCTGCGTTCGCACTACATCACCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCt                                                                                                                          >  2:1073448/1‑150 (MQ=255)                            gaAGGCCTGCGTTCGCACTACATCACCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAAACGTTACAACGACATGGAAGCACTGGCt                                                                                                                          >  2:676160/1‑150 (MQ=255)                               ggCCTGCGTTCGCACTACATCACCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGcc                                                                                                                       <  2:1447420/150‑1 (MQ=255)                                 ccTGCGTTCGCACTACATCACCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTgg                                                                                                                            >  2:305439/1‑143 (MQ=255)                                 ccTGCGTTCGCACTACATCACCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTgg                                                                                                                            <  1:305439/143‑1 (MQ=255)                                    gCGTTCGCACTACATCACCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGaaaa                                                                                                                  >  2:76308/1‑150 (MQ=255)                                               aCATCACCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTc                                                                                                       >  2:1416333/1‑150 (MQ=255)                                                 aTCACCCTGGAAATGCAGATCGAAGACGTCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCATCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCaa                                                                                                     <  1:676160/150‑1 (MQ=255)                                                   cACCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATa                                                                                                   >  2:1228483/1‑150 (MQ=255)                                                    aCCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATaa                                                                                                  <  1:1416333/150‑1 (MQ=255)                                                       cTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAAAAAAAAAAAAAAAAAGCCAACGCTCAATaacaa                                                                                               <  2:363724/150‑1 (MQ=255)                                                       cTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGACGTGGCTCAGGACCCAGCCAATG‑TCCGCCGCCTTCACACGCCCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATaacaa                                                                                               >  2:328429/1‑150 (MQ=255)                                                        tGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAAc                                                                                                                               <  2:1850789/117‑1 (MQ=255)                                                        tGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCCTTACATCGACCTGGAAGAAc                                                                                                                               >  1:1850789/1‑117 (MQ=255)                                                          gAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGCACCACGGTCTGCCGAAAAAGCCAACGCTCAATaacaacaa                                                                                            <  1:1909885/150‑1 (MQ=255)                                                                ttgagcgttggctttttcggcagccagttcttccaggtcgatgtaacggttGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCt                                                                                                                                       >  1:1936804‑M1/52‑101 (MQ=255)                                                                ttgagcgttggctttttcggcagccagttcttccaggtcgatgtaacggttGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCt                                                                                                                                       <  2:1936804‑M1/50‑1 (MQ=255)                                                                  gATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACg                                                                                    >  1:1543025/1‑150 (MQ=255)                                                                   aTCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACgg                                                                                   >  2:354624/1‑150 (MQ=255)                                                                     cGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGc                                                                                 >  1:713226/1‑150 (MQ=255)                                                                      gAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGcc                                                                                >  2:1313547/1‑150 (MQ=255)                                                                       aaGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCg                                                                               >  1:1929871/1‑150 (MQ=255)                                                                        aGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCgg                                                                              <  1:937444/150‑1 (MQ=255)                                                                         gACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCggg                                                                             >  2:1160729/1‑150 (MQ=255)                                                                                  cgTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAACAGCGGGTTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGggcgtggcgt                                                                    <  2:264365/150‑1 (MQ=255)                                                                                       ccagttcttccaggtcgatgtaacggttGCCGATGCGCGGGTGCAGGCGGCCGC‑CATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTa                                                               <  1:110254‑M1/122‑1 (MQ=255)                                                                                        gATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTAc                                                              <  1:754817/150‑1 (MQ=255)                                                                                         aTGAAATCGTCATGGCACTGGTCGCGGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTAcc                                                             >  2:1928217/1‑150 (MQ=255)                                                                                           gAAATCTCCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACccg                                                           <  2:243697/150‑1 (MQ=255)                                                                                           gAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGggcgtg                                                                        >  2:1760512/1‑137 (MQ=255)                                                                                           gAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGggcgtg                                                                        <  1:1760512/137‑1 (MQ=255)                                                                                             aaTCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGaaaaa                                                                                                                 <  2:1924558/94‑1 (MQ=255)                                                                                             aaTCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGaaaaa                                                                                                                 >  1:1924558/1‑94 (MQ=255)                                                                                                  tcgtGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGcc                                                    >  1:913728/1‑150 (MQ=255)                                                                                                  tcgtGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGcc                                                    >  2:1525083/1‑150 (MQ=255)                                                                                                   cgtGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGccc                                                   <  1:76308/150‑1 (MQ=255)                                                                                                   aggtcgatgtaacggttgccgatgcgcgggtgcaggcggccgccatcggcAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCaa                                                                                                     >  1:1936804‑M2/51‑101 (MQ=255)                                                                                                   aggtcgatgtaacggttgccgatgcgcgggtgcaggcggccgccatcggcAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCaa                                                                                                     <  2:1936804‑M2/51‑1 (MQ=255)                                                                                                    gtGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCg                                                  >  2:1466128/1‑150 (MQ=255)                                                                                                     tGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGa                                                 <  1:1228483/150‑1 (MQ=255)                                                                                                       gTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGAcc                                               <  1:1313547/150‑1 (MQ=255)                                                                                                       gTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGAcc                                               <  2:1074245/150‑1 (MQ=255)                                                                                                        tCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGACCt                                              <  2:913728/150‑1 (MQ=255)                                                                                                        tCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGACCt                                              >  1:627378/1‑150 (MQ=255)                                                                                                          cTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGACCTTc                                            <  1:1160729/150‑1 (MQ=255)                                                                                                           tGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGACCTTCa                                           <  1:1083680/150‑1 (MQ=255)                                                                                                             ggCGCAGCCGATG‑GCGGCCGCCTGCACCCGCACATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGACCTTCAAg                                         <  2:713226/150‑1 (MQ=255)                                                                                                               cgcAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGACCTTCAAGGa                                       >  1:582422/1‑150 (MQ=255)                                                                                                                 cAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGACCTTCAAGGAgc                                     <  1:1481668/150‑1 (MQ=255)                                                                                                                        TG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGACCTTCAAGGAGCGCCCTcc                              >  2:1146662‑M1/1‑150 (MQ=255)                                                                                                                            cggcCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGggcgtggc                                                                      <  1:92549/107‑1 (MQ=255)                                                                                                                            cggcCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGggcgtggc                                                                      >  2:92549/1‑107 (MQ=255)                                                                                                                             ggcCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGACCTTCAAGGAGCGCCCTCCATGa                          <  2:1543025/150‑1 (MQ=255)                                                                                                                                    tGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGACCTTCAAGGAGCGCCCTACATGATTCAGcc                   <  2:582422/150‑1 (MQ=255)                                                                                                                                           cgccatcggcAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGACCTTCAAGGAGCGCCCTCCATGATTCAGCCTGTCGCt            <  2:110254‑M2/140‑1 (MQ=255)                                                                                                                                               atcggcAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGACCTTCAAGGAGCGCCCTCCATGATTCAGCCTGTCGCTGAAc        <  2:1929871‑M2/144‑1 (MQ=255)                                                                                                                                                tcggcAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCgcgc                                                     >  2:1489501‑M2/6‑104 (MQ=255)                                                                                                                                                tcggcAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCgcgc                                                     <  1:1489501‑M2/99‑1 (MQ=255)                                                                                                                                                     aaCCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAACCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGACCTTCAAGGAGCGCCCTCCATGATTCAGCCTGTCGCTGAACGCacac  <  2:627378/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      CAGATCCCGATGATGCAGAAGGACGACGAAGGCCTGCGTTCGCACTACATCACCCTGGAAATGCAGATCGAAGACGCCCCGCGTGCCGATGAAATCGTCGTGGTCCTGGGCGCAGCCGATG‑GCGGCCGCCTGCACCCGCGCATCGGCAACCGTTACATCGACCTGGAAGAACTGGCTGCCGAAAAAGCCAACGCTCAATAACAACAACCAAGACGGGCCGGGGCGTGGCGTGCTTACCCGCCGCGCCCGACCTTCAAGGAGCGCCCTCCATGATTCAGCCTGTCGCTGAACGCACAC  >  NC_002947/4140813‑4141109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.