New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4617159	61 (0.840)	4 (0.060)	4/238	NT	6.1%	coding (3484/4593 nt)	PP_4085	rhs family protein
	?	NC_002947	= 4617172	65 (0.930)					coding (3497/4593 nt)	PP_4085	rhs family protein

CTACCCCACACGGGCAAGACCTATTCGGGACACAACCGCTACGGCTACGACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCGGATCGGCAGCAATTGGGTGCAGTATTTCGAGTATGACGCCGAGC  >  NC_002947/4617024‑4617315                                                                                                                                                     |                                                                                                                                                cTACCCCACACGGGCAAGACCTATTCGGGACACAACCGCTACGGCTACGACCTCAACAACCAACTGCAGACAGAACATCAGTCTTGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGAc                                                                                                                                                <  1:1691263‑M2/150‑2 (MQ=255)       cacaCGGGCAAGACCTATTCGGGACACAACCGCTACGGCTACGACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGcccc                                                                                                                                          >  1:1138656/1‑150 (MQ=255)          acGGGCAAGACCTATTCGGGACACAACCGCTACGGCTACGACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCaaa                                                                                                                                       >  1:1210074/1‑150 (MQ=255)               cAAGACCTATTCGGGACACAACCGCTACGGCTACGACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCAACAGCTGTCAGGCCACGCATGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCaa                                                                                                                                  <  1:1691395/150‑1 (MQ=17)                aaGACCTATTCGGGACACAACCGCTACGGCTACGACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAAt                                                                                                                                 >  1:1802239/1‑150 (MQ=255)                     cTATTCGGGACACAACCGCTACGGCTACGACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGCCGGCCCCAAACTCAATGGCCt                                                                                                                            >  1:592685/1‑150 (MQ=255)                     cTATTCGGGACACAACCGCTACGGCTACGACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCACCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGGCAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGcc                                                                                                                             >  1:1647593/1‑149 (MQ=255)                     cTATTCGGGACACAACCGCTACGGCTACGACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCACCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGGCAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGcc                                                                                                                             <  2:1647593/149‑1 (MQ=255)                      tATTCGGGACACAACCGCTACGGCTACGACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTg                                                                                                                           >  2:982515/1‑150 (MQ=255)                      tATTCGGGACACAACAGCTACGGCTACGACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCACCCTGTTCGACGCCCCCAAACTCAATGGCCTg                                                                                                                           >  2:959545/1‑150 (MQ=255)                       aTTCGGGACACAACCGCTACGGCTACGACCTCAACGAGCANCTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGa                                                                                                                          >  1:1003497/1‑150 (MQ=255)                             gACACAACCGCTACGGCTACGACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGc                                                                                                                    >  1:908357/1‑150 (MQ=255)                              acacAACCGCTACGGCTACGACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGca                                                                                                                   >  1:1326371/1‑150 (MQ=255)                                  aaCCGCTACGGCTCCGACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAAc                                                                                                               >  1:1217693/1‑150 (MQ=255)                                     cGCTACGGCTACGACCTCAACGAGCAACTGCAGCCCGATCGCCAGACACGCCCCAACTGGCAGTCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCCGCAACCCGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCgg                                                                                                            <  2:908357/150‑1 (MQ=17)                                          cggctacgACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGtt                                                                                                       <  1:275124/150‑1 (MQ=255)                                             ctacgACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGgt                                                                                                    >  2:897163/1‑150 (MQ=255)                                             ctacgACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGgt                                                                                                    <  2:1003497/150‑1 (MQ=255)                                             ccactaCCTCAACGAGCAACTTCAGACCGTTTACCAGTCACGCCCCAAGTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAGCTCAATGTCCTGATCAAGCACTGCCGGGTGTGGgt                                                                                                    <  2:400999/145‑1 (MQ=14)                                              tacgACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTg                                                                                                      >  2:673606/1‑147 (MQ=255)                                              tacgACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTg                                                                                                      <  1:673606/147‑1 (MQ=255)                                               acgACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGcc                                                                                                                             <  1:1489383/123‑1 (MQ=255)                                               acgACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGcc                                                                                                                             >  2:1489383/1‑123 (MQ=255)                                                   ccTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCa                                                                                              >  2:685052/1‑150 (MQ=255)                                                    cTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAg                                                                                             >  1:776614/1‑150 (MQ=255)                                                    cTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAg                                                                                             >  2:1515039/1‑150 (MQ=255)                                                            gCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGATGGTGTATCAGGACAAgcg                                                                                     >  1:461883/1‑150 (MQ=255)                                                              aaCTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGcgct                                                                                   >  2:1401559/1‑150 (MQ=255)                                                                    aGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCGGGACAAGcgctatcgct                                                                             >  1:48939/1‑150 (MQ=255)                                                                     gACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGcgctatcgcta                                                                            >  1:106440/1‑150 (MQ=255)                                                                       ccGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATg                                                                          <  2:98424/150‑1 (MQ=255)                                                                        cGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGa                                                                         >  1:873845/1‑150 (MQ=255)                                                                        cGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGa                                                                         >  1:874107/1‑150 (MQ=255)                                                                        cGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGa                                                                         <  1:1515039/150‑1 (MQ=255)                                                                         gTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCGGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGAc                                                                        <  2:1376772/150‑1 (MQ=255)                                                                         gTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCGGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGAc                                                                        <  2:1376765/150‑1 (MQ=255)                                                                            cACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTCCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCATGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGc                                                                     >  1:1806504/1‑150 (MQ=255)                                                                                 gTCACGCCCCGACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTgg                                                                <  2:500247/150‑1 (MQ=255)                                                                                 gTCACGCCCCAACTGGCATGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTgg                                                                <  1:1161737/150‑1 (MQ=37)                                                                                 gTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTgg                                                                <  1:897163/150‑1 (MQ=255)                                                                                      gCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATc                                                                                                                        <  2:975653/89‑1 (MQ=255)                                                                                      gCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATc                                                                                                                        >  1:975653/1‑89 (MQ=255)                                                                                       ccccAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCGAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGgacggtt                                                          >  1:713751/1‑148 (MQ=255)                                                                                           aaCTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGc                                                      >  2:1646465/1‑150 (MQ=255)                                                                                           aaCTGGCAGGCCACGCAGGTCGAGCATTTCAAGTACGACAAGGCCGGCACACTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGc                                                      <  2:53416/150‑1 (MQ=255)                                                                                                  aGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGgt                                                                                                    >  2:1442893/1‑97 (MQ=255)                                                                                                  aGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGgt                                                                                                    <  1:1442893/97‑1 (MQ=40)                                                                                                   ggCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCg                                              <  2:1469088/150‑1 (MQ=255)                                                                                                      cACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGTGGCTGTGCGAGAAGCGGAt                                           <  2:873845/150‑1 (MQ=255)                                                                                                      cACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCGGAt                                           <  2:874107/150‑1 (MQ=255)                                                                                                       aCGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCGGATc                                          <  2:1138656/150‑1 (MQ=255)                                                                                                       aCGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCGGATc                                          <  1:433025/150‑1 (MQ=255)                                                                                                              tCGAGGATTTCAAGTACGACAAGGCCGGCAACAAGCTTGACGGCCCCAAACTCAATGGCCTGATCAAGCAAAACCGGGTGTGGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCGGATCGgcagca                                   >  1:1124526/1‑150 (MQ=14)                                                                                                                   gATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCGGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCGGATCGGCAGCAATTgg                              <  2:48939/150‑1 (MQ=255)                                                                                                                               gACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCGGATCGGCAGCAATTGGGTGCAGTATTTc                  <  2:1092425/150‑1 (MQ=255)                                                                                                                               gACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCGGATCGGCAGCAATTGGGTGCAGTATTTc                  >  1:1092425/1‑150 (MQ=255)                                                                                                                                  aaGGCCGGCAACCTGTTCGAcggccttgtcgtacttgaaatcctcgacctgcgtggcctgccagttggggcgtgactggtgaacggtctgcagttg                                                                     >  2:1233897‑M2/1‑20 (MQ=255)                                                                                                                                  aaGGCCGGCAACCTGTTCGAcggccttgtcgtacttgaaatcctcgacctgcgtggcctgccagttggggcgtgactggtgaacggtctgcagttg                                                                     <  1:1233897‑M2/96‑77 (MQ=255)                                                                                                                                  aaGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCGGATCGGCAGCAATTGGGTGCAGTATTTCGAg               <  2:1691263/150‑1 (MQ=255)                                                                                                                                  aaGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCGGATCGGCAGCAATTGGGTGCAGTATTTCGAg               <  1:674217/150‑1 (MQ=255)                                                                                                                                    ggCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTTGGCGGCTGTGCGAGAAGCGGATCGGCAGCAATTGGGTGCAGTATTTCGAGTa             >  1:1120434/1‑150 (MQ=255)                                                                                                                                     gCCGGCAACCTGTTCGAcggccttgtcgtacttgaaatcctcgacctgcgtggcctgccagttggggcgtgac                                                                                         >  2:427581‑M2/1‑17 (MQ=255)                                                                                                                                     gCCGGCAACCTGTTCGAcggccttgtcgtacttgaaatcctcgacctgcgtggcctgccagttggggcgtgac                                                                                         <  1:427581‑M2/73‑57 (MQ=255)                                                                                                                                     gCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCGGATCGGCAGCAATTGGGTGCAGTATTTCGAGTAt            >  1:1868370/1‑150 (MQ=255)                                                                                                                                       cGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTgg                                                                <  2:791241/96‑1 (MQ=255)                                                                                                                                       cGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTgg                                                                >  1:791241/1‑96 (MQ=255)                                                                                                                                         gCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCGGATc                                          <  2:1649884/116‑1 (MQ=255)                                                                                                                                         gCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCGGATc                                          >  1:1649884/1‑116 (MQ=255)                                                                                                                                            aCCTGTTCGACGGCCCCAAACTCAATGGCCTGATCCAGCACAACCGGGTGTTg                                                                                                      <  2:994429/53‑1 (MQ=255)                                                                                                                                            aCCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTg                                                                                                      >  1:994429/1‑53 (MQ=255)                                                                                                                                              cTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCGGATCGGCAGCAATTGGGTGCAGTATTTCGAGTATGACGCCGag   >  1:1055798/1‑150 (MQ=255)                                                                                                                                               tGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCGGATCGGCAGCAATTGGGTGCAGTATTTCGAGTATGACGCCGagc  >  1:1325342/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                CTACCCCACACGGGCAAGACCTATTCGGGACACAACCGCTACGGCTACGACCTCAACGAGCAACTGCAGACCGTTCACCAGTCACGCCCCAACTGGCAGGCCACGCAGGTCGAGGATTTCAAGTACGACAAGGCCGGCAACCTGTTCGACGGCCCCAAACTCAATGGCCTGATCAAGCACAACCGGGTGTTGGTGTATCAGGACAAGCGCTATCGCTATGACCGCTTTGGGCGGCTGTGCGAGAAGCGGATCGGCAGCAATTGGGTGCAGTATTTCGAGTATGACGCCGAGC  >  NC_002947/4617024‑4617315

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.