New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4817645 =	71 (0.970)	4 (0.060)	4/234	NT	5.7%	coding (296/795 nt)	PP_4242	conserved protein of unknown function with Rhs repeat‑associated core domain
	?	NC_002947	4817675 =	66 (0.960)					coding (326/795 nt)	PP_4242	conserved protein of unknown function with Rhs repeat‑associated core domain

CCCGTTCAAGCGCGGTGGTCTGAATGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTATTTGCAGGATATCATGGTGGCATCAGGAGCTCTACGTGGT  >  NC_002947/4817526‑4817821                                                                                                                                                      |                                                                                                                                                    cccGTTCAAGCGCGGTGGTCTGAATGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGct                                                                                                                                                     >  2:126703/1‑150 (MQ=255) cccGTTCAAGCGCGGTGGTCTGAATGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCACACCAGATTGGCATGGGGCGct                                                                                                                                                     >  2:808520/1‑150 (MQ=255)  ccGTTCAAGCGCGGTGGTCTGAATGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGctc                                                                                                                                                    <  2:640839/150‑1 (MQ=255)    tcctgcaaatacataatctggcggaagattgtttgagggatgtgcaggcgcgtggaccggttctaacattgtcatccgcacctcgagacggtgatacttaccttccccttttaagaGCGCCCCCATACCAGATTGGCATGGGGCGCTCtt                                                                                                                                                  <  1:409025‑M1/34‑1 (MQ=255)    gTTCAAGCGCGGTGGTCTGAATGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCtt                                                                                                                                                  >  2:1150134/1‑150 (MQ=255)          gcgcGGTGGTCTGAATGCATATGGTTATTGCCAGTGAGACCCAATAAACTGGCAGGCACCGGGTCCAGGTGTGCGGTTTTGGCGAAGGTGATACACCGCCATCTCAGTTTGAGCGCTCATACCAGATTGGCATGGGGCGCTCTTAAAAgg                                                                                                                                            <  1:1407070/150‑1 (MQ=255)          gcgcGGTGGTCTGAATGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAgg                                                                                                                                            <  2:1695715/150‑1 (MQ=255)          gcgcGGTGGTCTGAATGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAgg                                                                                                                                            <  1:123611/150‑1 (MQ=255)          gcgcGGTGGTCTGAATGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAgg                                                                                                                                            <  1:27109/150‑1 (MQ=255)          aaatacgtgagcgggcggaagattgtttgaggtatgtgcaggcgcgtggaccggttctaacattgtcatccgcacctcgagacggtgatacttaccttccccttttaagaGCGCCCCCATACCAGATTGGCATGGTGCGCTCTTAAAAgg                                                                                                                                            >  2:409025‑M1/111‑150 (MQ=255)            gcgGTGGTCTGAATGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCACACCAGATTGGCATGGGGCGCTCTTAAAAgggg                                                                                                                                          <  1:1837298/150‑1 (MQ=255)              ggtggtCTGAATGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGaa                                                                                                                                        <  1:198431/150‑1 (MQ=255)                   tCTGAATGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTaa                                                                                                                                   >  1:563148/1‑150 (MQ=255)                   tCTGAATGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTaa                                                                                                                                   <  1:70203/150‑1 (MQ=255)                     tGAATGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGt                                                                                                                                 <  2:734836/150‑1 (MQ=255)                     tGAATGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGt                                                                                                                                 <  1:126703/150‑1 (MQ=255)                       aaTGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTAt                                                                                                                               <  1:386933/150‑1 (MQ=255)                        aTGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATc                                                                                                                              >  1:1380722/1‑150 (MQ=255)                         tGCATATGGTTATTGCCAGGAACACCCAAGAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCCAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCATATTCGCATGGGGCGCGCTTAAAAGGGGAAGGTAAGTATCa                                                                                                                             <  2:454053/150‑1 (MQ=255)                          gCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGGGAAGGTTATCTTCGGCATTCTCAGGGCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCAc                                                                                                                            >  1:577078/1‑150 (MQ=255)                          gCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCAc                                                                                                                            <  2:1491500/150‑1 (MQ=255)                            atatGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCg                                                                                                                          >  1:454575/1‑150 (MQ=255)                            atatGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCg                                                                                                                          >  1:1315728/1‑150 (MQ=255)                            aagattgtttgaggtatgtgcaggcgcgtggaccggttctaacattgtcatccgcacctcgagacggtgatacttaccttccccttttaagaGCGCCCCCATACCAGATTGGCATGGGGCGctct                                                                                                                                                   <  1:1580639‑M1/33‑1 (MQ=255)                            aagattgtttgaggtatgtgcaggcgcgtggaccggttctaacattgtcatccgcacctcgagacggtgatacttaccttccccttttaagaGCGCCCCCATACCAGATTGGCATGGGGCGctct                                                                                                                                                   >  2:1580639‑M1/93‑125 (MQ=255)                                     ttGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑t                                                                                                                <  2:454575/150‑1 (MQ=255)                                          aGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGGATGGTGTTGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGa                                                                                                           <  1:526681/150‑1 (MQ=255)                                          aGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGa                                                                                                           <  1:1150134/150‑1 (MQ=255)                                             gagaCCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGa                                                                                                        >  2:347880/1‑150 (MQ=255)                                                  ccAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCAcc                                                                                                                           >  2:1232202/1‑127 (MQ=255)                                                  ccAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCAcc                                                                                                                           <  1:1232202/127‑1 (MQ=255)                                                  ccAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATg                                                                                                   >  1:935988/1‑150 (MQ=255)                                                    aaTAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGt                                                                                                                                 <  2:1022990/119‑1 (MQ=255)                                                    aaTAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGt                                                                                                                                 >  1:1022990/1‑119 (MQ=255)                                                       aaaCTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGa                                                                                              >  2:1568944/1‑150 (MQ=255)                                                         tcTGGCAAGATCCAAGTGGGCATTGCCGGGTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGCCTCGAGG‑TGCGGATGACAATGTTAGAAc                                                                                            <  2:1380722/149‑1 (MQ=255)                                                         aCTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑t                                                                                                                <  2:775509/130‑1 (MQ=255)                                                         aCTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑t                                                                                                                >  1:775509/1‑130 (MQ=255)                                                         aCTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAAc                                                                                            <  1:1597033/150‑1 (MQ=255)                                                           tGGCAGGATCCAAGTGGGCATTTCAGTTTTGTTCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCg                                                                                          <  1:1458739/150‑1 (MQ=255)                                                             gCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGt                                                                                        <  2:1315728/150‑1 (MQ=255)                                                               aGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCACACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTcc                                                                                      <  1:808520/150‑1 (MQ=255)                                                                              aTTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATa                                                                       >  1:999757/1‑150 (MQ=255)                                                                                  ccGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTc                                                                   <  2:563148/150‑1 (MQ=255)                                                                                    gTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCGTATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCaa                                                                 >  2:761496/1‑150 (MQ=255)                                                                                          ggCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGACTCCAGCTTTGCGCTCTTAAAAGGGGAAGGTGAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATc                                                           <  1:119250/150‑1 (MQ=255)                                                                                               aGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAACCAATCTTCCg                                                      <  2:999757/150‑1 (MQ=255)                                                                                               aGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTccc                                                      >  1:518415/1‑149 (MQ=255)                                                                                                 gTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGcc                                                    >  1:1176711/1‑150 (MQ=255)                                                                                                 gTTATCTCCGGCATTCTCAGGTGGGGCGCCCATACCAGATTGGACTGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCAACGCGCCTGCACATACCTCAAACAATCTTCCGcc                                                    >  2:665557/1‑150 (MQ=255)                                                                                                       ttCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGc                                                     <  1:1832764/143‑1 (MQ=255)                                                                                                       ttCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGc                                                     >  2:1832764/1‑143 (MQ=255)                                                                                                           gCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑GGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTa                                          >  1:620850/1‑150 (MQ=255)                                                                                                            cATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTAt                                         <  2:935988/150‑1 (MQ=255)                                                                                                             aTTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTTTTAAAAGGGGAAGGGAAGTATCACCGTGTAACGGTTCCTGCTTGCATCGTT‑TAACCTGTTCACGCGCCTGCACATACCTCAAACAATCTTCCGGAAGATTATGTAtt                                        >  1:925339/1‑150 (MQ=255)                                                                                                             aTTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTAtt                                        >  1:509429/1‑150 (MQ=255)                                                                                                              ttCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTAttt                                       <  2:518415/150‑1 (MQ=255)                                                                                                              ccttttaagagcgcaccatgccaatctggtatgggggcgcTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCCGCTCACGTAttt                                       >  2:409025‑M2/41‑150 (MQ=255)                                                                                                               tctcAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTATTTg                                      <  1:1568944/150‑1 (MQ=255)                                                                                                                 tcAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACaa                                                                                                     <  2:1495271/85‑1 (MQ=255)                                                                                                                 tcAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACaa                                                                                                     >  1:1495271/1‑85 (MQ=255)                                                                                                                 tcAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTATTTGCa                                    >  2:145203/1‑150 (MQ=255)                                                                                                                  cAGGTCGCGCCCCCATACCAGCATGGCATGCGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTATTTGCAg                                   <  2:509429/150‑1 (MQ=255)                                                                                                                  cAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTATTTGCAg                                   <  2:1096557/150‑1 (MQ=255)                                                                                                                    aagagcgccccatgccaatctggtatgggggcgcTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATCCCTCAAACAATCTTCCGCCAGATTATGTATTTGCAGGa                                 <  1:409025‑M2/116‑1 (MQ=255)                                                                                                                     gTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGt                                                                                                                                 <  1:355182/54‑1 (MQ=255)                                                                                                                     gTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGt                                                                                                                                 >  2:355182/1‑54 (MQ=255)                                                                                                                     gTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATAc                                                                      <  1:105268/112‑1 (MQ=255)                                                                                                                     gTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATAc                                                                      >  2:105268/1‑112 (MQ=255)                                                                                                                     agagcgccccatgccaatctggtatgggggcgcTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCtt                                                         >  2:1580639‑M2/34‑125 (MQ=255)                                                                                                                     agagcgccccatgccaatctggtatgggggcgcTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCtt                                                         <  1:1580639‑M2/92‑1 (MQ=255)                                                                                                                        GCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTATTTGCAGGATATc                             <  2:1829352‑M1/150‑1 (MQ=255)                                                                                                                            CCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTATTTGCAGGATATCAtgg                         >  1:347880‑M1/1‑150 (MQ=255)                                                                                                                                 tACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTATTTGCAGGATATCATGGTGGCa                    >  1:1536154/1‑150 (MQ=255)                                                                                                                                  aCCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCg                                                                                          >  1:1334779/1‑79 (MQ=255)                                                                                                                                  aCCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCg                                                                                          >  1:1334831/1‑79 (MQ=255)                                                                                                                                  aCCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCg                                                                                          <  2:1334779/79‑1 (MQ=255)                                                                                                                                  aCCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCg                                                                                          <  2:1334831/79‑1 (MQ=255)                                                                                                                                    cAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGAAGGTGGCGCCTGCACATACCTCAAACAATCTTCCGCCCGATTATGTATTTGCAGGATATCATGGTGGCATCa                 >  1:821413/1‑150 (MQ=255)                                                                                                                                     aGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTATTTGCAGGATATCATGGTGGCATCAg                <  1:145203/150‑1 (MQ=255)                                                                                                                                            cATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTATTTGCAGGATATCATGGTGGCATCAGGAGctct         <  1:845828/150‑1 (MQ=255)                                                                                                                                            cATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTATTTGCAGGATATCATGGTGGCATCAGGAGctct         >  2:845828/1‑150 (MQ=255)                                                                                                                                             aTGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTAAAAAGGTAAAGAGTGTTTTTATGTATTTGCAGGATATCATGGTGGCATCAGGAGCTCTa        >  2:50679/1‑150 (MQ=255)                                                                                                                                                  gcgcTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAAt                                                            <  1:355205‑M2/89‑1 (MQ=255)                                                                                                                                                  gcgcTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAAt                                                            >  2:355205‑M2/5‑93 (MQ=255)                                                                                                                                                   cgcTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTATTTGCAGGATATCATGGTGGCATCAGGAGCTCTACGTGGt  >  1:669659‑M2/4‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                    CCCGTTCAAGCGCGGTGGTCTGAATGCATATGGTTATTGCCAGGGAGACCCAATAAACTGGCAGGATCCAAGTGGGCATTTCCGTTTTTGGCGAAGGTTATCTTCGGCATTCTCAGGTCGCGCCCCCATACCAGATTGGCATGGGGCGCTCTTAAAAGGGGAAGGTAAGTATCACCGTCTCGAGG‑TGCGGATGACAATGTTAGAACCGGTCCACGCGCCTGCACATACCTCAAACAATCTTCCGCCAGATTATGTATTTGCAGGATATCATGGTGGCATCAGGAGCTCTACGTGGT  >  NC_002947/4817526‑4817821

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.