New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 548966768 (0.930)6 (0.090) 6/238 NT 8.4% coding (101/597 nt) PP_4825 MarC family membrane protein
?NC_002947 = 5489688 66 (0.940)coding (122/597 nt) PP_4825 MarC family membrane protein

CGGCATAAACCCAAGGAACACTGCTCATGCTCCATGAGTTGTTCAGCGTCTACCTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGGCATGGCCCAGG  >  NC_002947/5489541‑5489837
                                                                                                                                                   |                                                                                                                                                     
cGGCATAAACCCAAGGAACACTGCTCATGCTCCATGAGTTGTTCAGCGTCTACCTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCct                                                                                                                                                     >  2:868168‑M2/1‑148 (MQ=255)
    aTAAACCCAAGGAACACTGCTCATGCTCCATGAGTTGTTCAGCGTCTACCTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGaa                                                                                                                                                 >  2:815872/1‑150 (MQ=255)
    aTAAACCCAAGGAACACTGCTCATGCTCCATGAGTTGTTCAGCGTCTACCTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGaa                                                                                                                                                 <  2:667146/150‑1 (MQ=255)
     tAAACCCAAGGAACACTGCTCATGCTCCATGAGTTGTTCAGCGTCTACCTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAg                                                                                                                                                <  1:815872/150‑1 (MQ=255)
         cccAAGGAACACTGCTCATGCTCCATGAGTTGTTCAGCGTCTACCTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTcg                                                                                                                                            >  1:864636/1‑150 (MQ=255)
                    cTGCTCATGCTCCATGAGTTGTTCAGCGTCTACCTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGcc                                                                                                                                 >  1:563655/1‑150 (MQ=255)
                       cTCATGCTCCATGAGTTGTTCAGCGTCTACCTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTg                                                                                                                              <  2:1308871/150‑1 (MQ=255)
                            gCTCCATGAGTTGTTCAGCGTCTACCTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGc                                                                                                                         >  2:1649213/1‑150 (MQ=255)
                                   gAGTTGTTCAGCGTCTACCTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCgtg                                                                                                                  >  1:209487/1‑150 (MQ=255)
                                      ttgttCAGCGTCTACCTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTg                                                                                                               >  1:1042838/1‑150 (MQ=255)
                                        gttCAGCGTCTACCTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCt                                                                                                             >  2:867555/1‑150 (MQ=255)
                                            aGCGTCTACCTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTAc                                                                                                         >  2:1468744/1‑150 (MQ=255)
                                             gCGTCTACCTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCtt                                                                                                                               >  2:564414/1‑127 (MQ=255)
                                             gCGTCTACCTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCtt                                                                                                                               <  1:564414/127‑1 (MQ=255)
                                                    ccTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTcgg                                                                                                 >  2:1644323/1‑150 (MQ=255)
                                                    ccTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTcgg                                                                                                 >  2:103428/1‑150 (MQ=255)
                                                      tGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTcgggc                                                                                               >  2:1473454/1‑150 (MQ=255)
                                                         aaaTGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTcgggcggg                                                                                            <  2:1740096/150‑1 (MQ=255)
                                                         aaaTGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTcgggcggc                                                                                            <  2:1042838/150‑2 (MQ=255)
                                                          aaTGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCgggcgggc                                                                                           >  1:413794/1‑150 (MQ=255)
                                                             gCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGAt                                                                                        <  1:1649213/150‑1 (MQ=255)
                                                                 gTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTc                                                                                    >  2:1808750/1‑150 (MQ=255)
                                                                  tGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCg                                                                                   >  2:1075730/1‑150 (MQ=255)
                                                                       tACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCgg                                                                                  <  1:348010/146‑1 (MQ=255)
                                                                       tACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCgg                                                                                  >  2:348010/1‑146 (MQ=255)
                                                                         cAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTg                                                                                                               >  1:1912693/1‑115 (MQ=255)
                                                                         cAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTg                                                                                                               <  2:1912693/115‑1 (MQ=255)
                                                                               gTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCAt                                                                      <  2:864636/150‑1 (MQ=255)
                                                                                   ttcGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATc                                                                                       >  2:829403/1‑129 (MQ=255)
                                                                                   ttcGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATc                                                                                       <  1:829403/129‑1 (MQ=255)
                                                                                       tGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCAccgccg                                                              >  1:796156/1‑150 (MQ=255)
                                                                                          tGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATg                                                           >  1:862704/1‑150 (MQ=255)
                                                                                              gtgtTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGtt                                                                                                                                        <  1:522529/69‑1 (MQ=255)
                                                                                              gtgtTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGtt                                                                                                                                        >  2:522529/1‑69 (MQ=255)
                                                                                              gtgtTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCtt                                                       >  2:825720/1‑150 (MQ=255)
                                                                                               tgtTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTc                                                      <  2:563655/150‑1 (MQ=255)
                                                                                                gtTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTcc                                                     <  1:1565407/150‑1 (MQ=255)
                                                                                                    catcaGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCAccgccg                                                              <  2:1800701/137‑1 (MQ=255)
                                                                                                    catcaGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCAccgccg                                                              >  1:1800701/1‑137 (MQ=255)
                                                                                                     atcaGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATc                                                >  2:599257/1‑150 (MQ=255)
                                                                                                        aGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGt                                             <  1:1644323/150‑1 (MQ=255)
                                                                                                          ccTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTc                                                      <  2:1783056/139‑1 (MQ=255)
                                                                                                          ccTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTc                                                      >  1:1783056/1‑139 (MQ=255)
                                                                                                          ccTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGc                                           <  1:599257/150‑1 (MQ=255)
                                                                                                           cTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCt                                          <  2:718538/150‑1 (MQ=255)
                                                                                                           cTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCt                                          >  2:430242/1‑150 (MQ=255)
                                                                                                            tGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTg                                         <  1:867555/150‑1 (MQ=255)
                                                                                                             gACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATTACCGCCGATGCCTTCCGCATCGGTGCTgg                                        <  1:1808750/150‑1 (MQ=255)
                                                                                                             gACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTgg                                        <  1:430242/150‑1 (MQ=255)
                                                                                                             gACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGATCGCGTTCGCAGACTTCCTCGCCAGCATGCTGCTTTTTCTGTTCGGTCTGTTGATCTTTGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTgg                                        >  2:219093/1‑150 (MQ=255)
                                                                                                               cccGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCa                                      >  1:827144/1‑150 (MQ=255)
                                                                                                                ccGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAg                                     >  1:974976/1‑150 (MQ=255)
                                                                                                                 cGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCctggagtggccacgggtcaggctgatgaaacacgacagcacgaagaacgggctgtagagcacgagcattttcaggtagacgctgaacaactcatggagcatgagcagtgttcctt                                    <  1:1394128‑M2/150‑116 (MQ=255)
                                                                                                                 cGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGc                                    <  1:103428/150‑1 (MQ=255)
                                                                                                                  gTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCg                                   >  2:744757/1‑150 (MQ=255)
                                                                                                                    ggCCACTCCAGCAAGGAGCGCAAGCAACTGGCctggagtggccacgggtcaggctgatgaaacacgacagcacgaagaacgggctgtagagcacgagcattttcaggtagacgctgaacaactcatggagcatgagcagtgttccttggg                                 >  2:1394128‑M2/1‑32 (MQ=255)
                                                                                                                     gCCACTCCAGCAAGGAGCGCAAGCAACTGGCctggagtggccacgg                                                                                                                                        >  2:243375‑M2/1‑31 (MQ=255)
                                                                                                                     gCCACTCCAGCAAGGAGCGCAAGCAACTGGCctggagtggcaacgg                                                                                                                                        <  1:243375‑M2/46‑16 (MQ=255)
                                                                                                                     gCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGc                                >  1:1861511/1‑150 (MQ=255)
                                                                                                                     gCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGc                                >  1:800662/1‑150 (MQ=255)
                                                                                                                      ccACTCCAGCAAGGAGCGCAAGCAACTGGCctggagtggccacgggtcaggctgatgaaacacgacagcacgaagaacggg                                                                                                    >  2:1890374‑M2/1‑30 (MQ=255)
                                                                                                                      ccACTCCAGCAAGGAGCGCAAGCAACTGGCctggagtggccacgggtcaggctgatgaaacacgacagcacgaagaacggg                                                                                                    <  1:1890374‑M2/81‑52 (MQ=255)
                                                                                                                        aCTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGt                             >  1:1786059/1‑150 (MQ=255)
                                                                                                                        aCTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGt                             >  2:436386/1‑150 (MQ=255)
                                                                                                                         cTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGtt                            >  1:1880287/1‑150 (MQ=255)
                                                                                                                              gCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCAttt                       >  2:1016411/1‑150 (MQ=255)
                                                                                                                              gCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCAttt                       <  2:862704/150‑1 (MQ=255)
                                                                                                                                aaGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGCTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCg                     <  2:209487/150‑1 (MQ=255)
                                                                                                                                  ggAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTc                                                      <  2:583987/115‑1 (MQ=255)
                                                                                                                                  ggAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTc                                                      >  1:583987/1‑115 (MQ=255)
                                                                                                                                     gcgcAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCt                >  2:236561/1‑150 (MQ=255)
                                                                                                                                       gcaagcaaCTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTgg              <  2:413794/150‑1 (MQ=255)
                                                                                                                                        caagcaaCTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTggg             <  2:800662/150‑1 (MQ=255)
                                                                                                                                        caagcaaCTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTggg             <  2:1861511/150‑1 (MQ=255)
                                                                                                                                             aaCTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTgg                                        >  2:1848260/1‑118 (MQ=255)
                                                                                                                                             aaCTGGCCTGGAAGGTCGCGTGCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTgg                                        <  1:1848260/118‑1 (MQ=255)
                                                                                                                                                 ggCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGGCATGGCCCa    <  2:1342035/150‑1 (MQ=255)
                                                                                                                                                 ggCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGGCATGGCCCa    <  2:827144/150‑1 (MQ=255)
                                                                                                                                                  gCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGGCATGGcc      <  2:1653353/147‑1 (MQ=255)
                                                                                                                                                  gCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGGCATGGcc      >  1:1653353/1‑147 (MQ=255)
                                                                                                                                                   ccTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGGCATGGCCCAgg  >  1:825999/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
CGGCATAAACCCAAGGAACACTGCTCATGCTCCATGAGTTGTTCAGCGTCTACCTGAAAATGCTCGTGCTCTACAGCCCGTTCTTCGTGCTGTCGTGTTTCATCAGCCTGACCCGTGGCCACTCCAGCAAGGAGCGCAAGCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGGCATGGCCCAGG  >  NC_002947/5489541‑5489837

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.