New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 561167273 (1.000)4 (0.060) 4/236 NT 5.5% coding (615/1176 nt) PP_4931 hypothetical protein
?NC_002947 = 5611698 69 (0.990)coding (641/1176 nt) PP_4931 hypothetical protein

GCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCGGGTAACGGTGACCACCCATCCGGCAGCCGATG  >  NC_002947/5611556‑5611847
                                                                                                                                              |                                                                                                                                                     
gCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTg                                                                                                                                                >  2:1445722/1‑150 (MQ=255)
gCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTg                                                                                                                                                <  1:926909/150‑1 (MQ=255)
gCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTg                                                                                                                                                <  1:1410930/150‑1 (MQ=255)
 ccGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTgg                                                                                                                                               <  1:1118900/150‑1 (MQ=255)
   ggCTAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGc                                                                                                                                             >  2:1451584/1‑150 (MQ=255)
     cGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCt                                                                                                                                           <  2:762139/150‑1 (MQ=255)
         tCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTATACAGTCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGAt                                                                                                                                       >  1:1593251/1‑150 (MQ=255)
            ttGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAg                                                                                                                                    <  2:1363742/150‑1 (MQ=255)
            ttGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAg                                                                                                                                    >  1:795688/1‑150 (MQ=255)
            ttGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAg                                                                                                                                    >  1:1218177/1‑150 (MQ=255)
                   cAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAAAGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCa                                                                                                                             <  2:358405/150‑1 (MQ=255)
                     ggTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATg                                                                                                                           <  1:323952/150‑1 (MQ=255)
                       tGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCa                                                                                                                         <  1:1515877/150‑1 (MQ=255)
                                   aCCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCt                                                                                                             <  1:775251/150‑1 (MQ=255)
                                     ccTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGc                                                                                                           <  2:795688/150‑1 (MQ=255)
                                       ttGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGcac                                                                                                         >  1:1641141/1‑150 (MQ=255)
                                         gCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACAt                                                                                                       <  1:1451584/150‑1 (MQ=255)
                                                ggTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATg                                                                                                                           <  2:818523/123‑1 (MQ=255)
                                                ggTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATg                                                                                                                           >  1:818523/1‑123 (MQ=255)
                                                ggTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATg                                                                                                <  2:1218177/150‑1 (MQ=255)
                                                   aaTGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATc                                                                                                                                      <  2:906453/109‑1 (MQ=255)
                                                   aaTGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATc                                                                                                                                      >  1:906453/1‑109 (MQ=255)
                                                   aaTGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCgg                                                                                                                                >  1:76862/1‑115 (MQ=255)
                                                   aaTGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCgg                                                                                                                                <  2:76862/115‑1 (MQ=255)
                                                       cGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCAt                                                                                                 <  2:1313604/142‑1 (MQ=255)
                                                       cGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCAt                                                                                                 >  1:1313604/1‑142 (MQ=255)
                                                       cGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAgg                                                                                         <  2:1641141/150‑1 (MQ=255)
                                                        gTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAggg                                                                                        >  2:820102/1‑150 (MQ=255)
                                                             tCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGa                                                                                   >  1:978434/1‑150 (MQ=255)
                                                                 ccTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAAccc                                                                               >  1:1325379/1‑149 (MQ=255)
                                                                        gTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCt                                                                        <  1:748901/150‑1 (MQ=255)
                                                                          ggACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAACCCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCttt                                                                      <  1:1793651/150‑1 (MQ=255)
                                                                          ggACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCttt                                                                      <  1:1215451/150‑1 (MQ=255)
                                                                          ggACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCttt                                                                      <  2:1319555/150‑1 (MQ=255)
                                                                                ccGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGTAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGc                                                                >  2:1765374/1‑150 (MQ=255)
                                                                                ccGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGc                                                                >  1:478590/1‑150 (MQ=255)
                                                                                 cGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGcc                                                                                             <  2:916772/120‑1 (MQ=255)
                                                                                 cGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGcc                                                                                             >  1:916772/1‑120 (MQ=255)
                                                                                             gCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTcggc                                                   <  2:478590/150‑1 (MQ=255)
                                                                                              cccAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAAcccg                                                                                                                   >  1:1766272/1‑85 (MQ=255)
                                                                                              cccAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAAcccg                                                                                                                   <  2:1766272/85‑1 (MQ=255)
                                                                                                cAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTcggcggc                                                >  2:1534244/1‑150 (MQ=255)
                                                                                                cAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTcggcggc                                                >  2:1361686/1‑150 (MQ=255)
                                                                                                cAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTcggcggc                                                >  1:207095/1‑150 (MQ=255)
                                                                                                 aaCGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCa                                                                             >  2:354967/1‑120 (MQ=255)
                                                                                                 aaCGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCa                                                                             <  1:354967/120‑1 (MQ=255)
                                                                                                  aCGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTcggcggcgg                                              <  1:1445722/150‑1 (MQ=255)
                                                                                                   cGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCggg                                             <  2:1593251/150‑1 (MQ=255)
                                                                                                       tCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCa                                         >  1:601930/1‑150 (MQ=255)
                                                                                                       tCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCa                                         >  1:465931/1‑150 (MQ=255)
                                                                                                          tATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAggcgctcaatacgatgcgttgggcacggatttcccggtcgtccacgcgcaggccgaccaacgcattaccttcac                                                                             <  1:1330763‑M2/111‑75 (MQ=255)
                                                                                                          tATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAggcgctcaatacgatgcgttgggcacggatttcccggtcgtccacgcgcaggccgaccaacgcattaccttcac                                                                             >  2:1330763‑M2/1‑37 (MQ=255)
                                                                                                          tATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAAc                                                                          <  2:1903622/114‑1 (MQ=255)
                                                                                                          tATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAAc                                                                          >  1:1903622/1‑114 (MQ=255)
                                                                                                          tATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGc                                      >  1:1732319/1‑150 (MQ=255)
                                                                                                            ttGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCt                                                                               >  1:1824068/1‑107 (MQ=255)
                                                                                                            ttGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCt                                                                               <  2:1824068/107‑1 (MQ=255)
                                                                                                            ttGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCtt                                                                       <  1:1057401/115‑1 (MQ=255)
                                                                                                            ttGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCtt                                                                       >  2:1057401/1‑115 (MQ=255)
                                                                                                               aGCGCGGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCgg                                 <  2:174244/150‑1 (MQ=255)
                                                                                                               aGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAggcgctcaatacgatgcgttgggcacggatttcccggtcgtccacgcgcaggccgaccaacgcattaccttcacgcaa                                                                         >  2:345815‑M2/1‑32 (MQ=255)
                                                                                                               aGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAggcgctcaatacgatgcgttgggcacggatttcccggtcgtccacgcgcaggccgaccaacgcattaccttcacgcaa                                                                         <  1:345815‑M2/110‑79 (MQ=255)
                                                                                                               aGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAggg                                                                                        <  1:795314/95‑1 (MQ=255)
                                                                                                               aGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAggg                                                                                        >  2:795314/1‑95 (MQ=255)
                                                                                                               aGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCgg                                 <  2:1663693/150‑1 (MQ=255)
                                                                                                               aGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCgg                                 <  1:22551/150‑1 (MQ=255)
                                                                                                                   ccGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCGGGTaa                             >  1:282321/1‑150 (MQ=255)
                                                                                                                        gCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCGGGTAACGGTg                        <  2:282321/150‑1 (MQ=255)
                                                                                                                         ccGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCGGGTAACGGTGa                       <  2:1732319/150‑1 (MQ=255)
                                                                                                                         ccGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCGGGTAACGGTGa                       <  2:526840/150‑1 (MQ=255)
                                                                                                                            gCACCAAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCGGGTAACGGTGacca                    >  1:170972/1‑150 (MQ=255)
                                                                                                                             cACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCGGGTAACGGGGaccac                   >  2:1108840/1‑150 (MQ=255)
                                                                                                                                cGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCGGGTAACGGTGacca                    <  1:386932/146‑1 (MQ=255)
                                                                                                                                cGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCGGGTAACGGTGacca                    >  2:386932/1‑146 (MQ=255)
                                                                                                                                  aaGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAAc                                                                                 <  2:1254202/83‑1 (MQ=255)
                                                                                                                                  aaGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAAc                                                                                 >  1:1254202/1‑83 (MQ=255)
                                                                                                                                     gCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCTCCAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCGGGTAACGGTGACCACCCATCCgg           >  1:621422/1‑150 (MQ=255)
                                                                                                                                       ttGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCGGGTAACGGTGACCACCCATCCGGcc         >  2:184252/1‑149 (MQ=255)
                                                                                                                                          ctgcAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCGGGTAACGGTGACCACCCATCCGGCAGcc      <  1:1534244/150‑1 (MQ=255)
                                                                                                                                            gcAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCaa                                        <  1:938015/114‑1 (MQ=255)
                                                                                                                                            gcAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCaa                                        >  2:938015/1‑114 (MQ=255)
                                                                                                                                              aGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCGGGTAACGGTGACCACCCATCCGGCAGCCGATg  >  1:195840/1‑150 (MQ=255)
                                                                                                                                              |                                                                                                                                                     
GCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCCCAAGCCGCGGGTAACGGTGACCACCCATCCGGCAGCCGATG  >  NC_002947/5611556‑5611847

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.