mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 204 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6181885 | 17 (0.230) | 4 (0.060) | 3/232 | NT | 26.8% | coding (42/408 nt) | atpI | ATP synthase protein I |
| ? | NC_002947 | = 6181901 | 6 (0.090) | coding (26/408 nt) | atpI | ATP synthase protein I | |||||
| * | ? | NC_002947 | = 6110193 | 95 (1.300) | 4 (0.060) | 4/230 | NT | 4.1% | coding (168/627 nt) | PP_5360 | hypothetical protein |
| ? | NC_002947 | = 6110206 | 97 (1.430) | coding (155/627 nt) | PP_5360 | hypothetical protein | |||||
| * | ? | NC_002947 | = 6109593 | 110 (1.510) | 3 (0.040) | 3/232 | NT | 2.8% | coding (101/972 nt) | PP_5359 | CobW/P47K family protein |
| ? | NC_002947 | = 6109601 | 109 (1.600) | coding (93/972 nt) | PP_5359 | CobW/P47K family protein | |||||
| * | ? | NC_002947 | = 6036883 | 77 (1.050) | 3 (0.040) | 3/234 | NT | 4.2% | coding (1357/1392 nt) | algC | phosphomannomutase/phosphoglucomutase |
| ? | NC_002947 | = 6036902 | 63 (0.920) | coding (1376/1392 nt) | algC | phosphomannomutase/phosphoglucomutase | |||||
| * | ? | NC_002947 | = 6019326 | 78 (1.070) | 3 (0.050) | 3/202 | NT | 3.8% | intergenic (‑71/+74) | dadX/dadA‑II | alanine racemase/D‑amino acid:quinone oxidoreductase |
| ? | NC_002947 | = 6019356 | 89 (1.500) | intergenic (‑101/+44) | dadX/dadA‑II | alanine racemase/D‑amino acid:quinone oxidoreductase | |||||
| * | ? | NC_002947 | = 6019157 | 84 (1.150) | 3 (0.040) | 3/242 | NT | 4.3% | coding (99/1074 nt) | dadX | alanine racemase |
| ? | NC_002947 | = 6019237 | 50 (0.700) | coding (19/1074 nt) | dadX | alanine racemase | |||||
| * | ? | NC_002947 | 5958986 = | 93 (1.270) | 3 (0.040) | 3/230 | NT | 3.7% | coding (2334/2856 nt) | cyaA | adenylate cyclase |
| ? | NC_002947 | 5959036 = | 72 (1.060) | coding (2384/2856 nt) | cyaA | adenylate cyclase | |||||
| * | ? | NC_002947 | = 5928013 | 84 (1.150) | 3 (0.050) | 3/202 | NT | 4.0% | intergenic (‑63/+90) | PP_5195/fbpA | iron ABC transporter permease/iron ABC transporter substrate‑binding protein |
| ? | NC_002947 | = 5928041 | 74 (1.250) | intergenic (‑91/+62) | PP_5195/fbpA | iron ABC transporter permease/iron ABC transporter substrate‑binding protein | |||||
| * | ? | NC_002947 | = 5918429 | 95 (1.300) | 3 (0.040) | 3/232 | NT | 3.0% | intergenic (+63/+32) | ygiF/PP_5188 | thiamine triphosphatase/AsnC/Lrp family transcriptional regulator |
| ? | NC_002947 | = 5918456 | 103 (1.510) | intergenic (+90/+5) | ygiF/PP_5188 | thiamine triphosphatase/AsnC/Lrp family transcriptional regulator | |||||
| * | ? | NC_002947 | = 5874614 | 71 (0.970) | 3 (0.050) | 3/226 | NT | 4.0% | intergenic (‑50/+98) | PP_5148/ilvA‑II | membrane protein/threonine deaminase |
| ? | NC_002947 | = 5874674 | 80 (1.200) | intergenic (‑110/+38) | PP_5148/ilvA‑II | membrane protein/threonine deaminase | |||||