breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	freq	annotation	gene	description
RA	6,332	C→A	5.1%	R17R (CGG→CGT)	trmE ←	GTPase
RA	6,346	T→G	5.3%	T13P (ACG→CCG)	trmE ←	GTPase
RA	6,429	Δ1 bp	6.9%	intergenic (‑47/+42)	trmE ← / ← oxaA	GTPase/membrane protein insertase
RA	6,433:1	+T	6.9%	intergenic (‑51/+38)	trmE ← / ← oxaA	GTPase/membrane protein insertase
RA	11,648	G→C	5.1%	M182I (ATG→ATC)	dnaN →	DNA polymerase III subunit beta
RA	11,649	A→G	5.1%	S183G (AGC→GGC)	dnaN →	DNA polymerase III subunit beta
RA	27,434	T→C	6.0%	intergenic (‑281/+165)	PP_0022 ← / ← PP_0023	hypothetical protein/hypothetical protein
RA	27,581	C→T	11.3%	intergenic (‑428/+18)	PP_0022 ← / ← PP_0023	hypothetical protein/hypothetical protein
RA	27,584	A→G	12.5%	intergenic (‑431/+15)	PP_0022 ← / ← PP_0023	hypothetical protein/hypothetical protein
RA	30,651	C→T	6.2%	A74V (GCG→GTG)	PP_0026 →	cobalt/cadmium/zinc exporter
RA	35,009	A→G	7.3%	intergenic (+27/+31)	czrSA → / ← PP_0031	metal‑sensor histidine kinase/hypothetical protein
RA	35,012	C→T	7.3%	intergenic (+30/+28)	czrSA → / ← PP_0031	metal‑sensor histidine kinase/hypothetical protein
RA	43,457	Δ1 bp	8.9%	intergenic (+23/+70)	PP_0040 → / ← cadA‑I	hypothetical protein/cadmium translocating P‑type ATPase
RA	43,461:1	+A	8.8%	intergenic (+27/+66)	PP_0040 → / ← cadA‑I	hypothetical protein/cadmium translocating P‑type ATPase
RA	48,872	T→G	6.1%	D168A (GAC→GCC)	czcA‑I ←	cation efflux system protein
RA	58,747	T→A	6.4%	intergenic (‑658/+30)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,750	T→A	6.4%	intergenic (‑661/+27)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	68,591	T→C	6.0%	I228V (ATT→GTT)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,598	T→G	8.9%	P225P (CCA→CCC)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,603	C→A	8.9%	G224W (GGG→TGG)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,610	G→A	7.0%	N221N (AAC→AAT)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	87,493	T→A	7.5%	N98I (AAT→ATT)	PP_0076 ←	choline betaine‑binding protein
RA	88,649	T→A	10.1%	A223A (GCA→GCT)	betC ←	choline‑sulfatase
RA	88,653	T→A	10.4%	Q222L (CAG→CTG)	betC ←	choline‑sulfatase
RA	88,657	T→A	10.3%	S221C (AGC→TGC)	betC ←	choline‑sulfatase
RA	122,647	G→T	5.1%	A104A (GCC→GCA)	PP_0116 ←	putative lipoprotein
RA	122,650	A→C	5.0%	R103R (CGT→CGG)	PP_0116 ←	putative lipoprotein
RA	126,115	A→G	6.5%	intergenic (+25/+25)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	126,116	C→T	6.5%	intergenic (+26/+24)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	160,310	C→T	8.5%	E27K (GAG→AAG)	PP_0149 ←	hypothetical protein
RA	160,311	A→G	7.7%	L26L (CTT→CTC)	PP_0149 ←	hypothetical protein
RA	163,973	T→A	5.1%	intergenic (‑140/+47)	scpC ← / ← pntB	propionyl‑CoA:succinate CoA transferase/pyridine nucleotide transhydrogenase subunit beta
RA	163,978	Δ1 bp	5.2%	intergenic (‑145/+42)	scpC ← / ← pntB	propionyl‑CoA:succinate CoA transferase/pyridine nucleotide transhydrogenase subunit beta
RA	165,929	G→T	7.9%	A326A (GCC→GCA)	pntAA ←	pyridine nucleotide transhydrogenase subunit alpha
RA	165,932	A→C	7.4%	D325E (GAT→GAG)	pntAA ←	pyridine nucleotide transhydrogenase subunit alpha
RA	181,943	C→T	22.4%	noncoding (52/120 nt)	PP_5SB →	5S ribosomal RNA
RA	182,034	Δ1 bp	10.8%	intergenic (+23/+42)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,036:1	+C	11.0%	intergenic (+25/+40)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	195,559	C→A	32.2%	T355T (ACC→ACA)	PP_0168 →	putative surface adhesion protein
RA	195,628	C→T	10.7%	D378D (GAC→GAT)	PP_0168 →	putative surface adhesion protein
RA	195,629	A→G	10.0%	T379A (ACC→GCC)	PP_0168 →	putative surface adhesion protein
RA	195,634	C→T	45.3%	T380T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	195,724	A→G	7.7%	V410V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	196,306	T→C	29.1%	N604N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	196,327	A→C	34.7%	T611T (ACA→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,351	C→G	42.8%	T619T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	196,372	A→G	6.4%	K626K (AAA→AAG)	PP_0168 →	putative surface adhesion protein
RA	196,390	T→C	37.3%	D632D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	196,795	G→C	20.1%	T767T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,879	G→A	40.8%	V795V (GTG→GTA)	PP_0168 →	putative surface adhesion protein
RA	197,032	C→T	7.9%	T846T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,089	T→C	14.7%	N865N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	197,179	A→G	9.0%	V895V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	197,185	C→T	7.3%	T897T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,551	C→G	13.5%	T1019T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	197,572	G→A	23.4%	K1026K (AAG→AAA)	PP_0168 →	putative surface adhesion protein
RA	197,590	T→C	24.4%	D1032D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,632	T→C	12.4%	T1046T (ACT→ACC)	PP_0168 →	putative surface adhesion protein
RA	197,695	G→C	18.3%	T1067T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	198,367	G→C	5.6%	V1291V (GTG→GTC)	PP_0168 →	putative surface adhesion protein
RA	202,062	T→A	7.2%	L2523Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	202,071	C→G	6.3%	T2526S (ACC→AGC)	PP_0168 →	putative surface adhesion protein
RA	202,309	C→G	7.6%	V2605V (GTC→GTG)	PP_0168 →	putative surface adhesion protein
RA	205,404	T→A	5.4%	L3637Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	210,699	T→A	7.8%	L5402Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	210,708	C→G	5.8%	T5405S (ACC→AGC)	PP_0168 →	putative surface adhesion protein
RA	220,561	A→T	8.0%	intergenic (+18/‑110)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	220,562	C→G	7.9%	intergenic (+19/‑109)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	220,563	A→T	8.0%	intergenic (+20/‑108)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	233,832	A→T	10.8%	intergenic (+20/+43)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,833	C→G	10.8%	intergenic (+21/+42)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,834	A→T	10.6%	intergenic (+22/+41)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	281,820	C→G	5.0%	P158A (CCG→GCG)	PP_0228 →	serine acetyltransferase
RA	284,569	Δ1 bp	5.2%	intergenic (+15/+48)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	284,587	T→A	8.6%	intergenic (+33/+30)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	284,588	T→A	8.4%	intergenic (+34/+29)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	296,370	C→A	7.5%	A20S (GCG→TCG)	PP_0242 ←	TetR family transcriptional regulator
RA	296,371	C→G	7.5%	E19D (GAG→GAC) ‡	PP_0242 ←	TetR family transcriptional regulator
RA	296,372	T→G	7.5%	E19A (GAG→GCG) ‡	PP_0242 ←	TetR family transcriptional regulator
RA	308,740	C→T	7.0%	intergenic (+1754/‑116)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	308,741	A→G	6.8%	intergenic (+1755/‑115)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	322,135	G→A	13.1%	intergenic (+420/+38)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,142	T→C	12.7%	intergenic (+427/+31)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	337,812	A→G	11.4%	intergenic (‑59/+70)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,819:1	+A	10.9%	intergenic (‑66/+63)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,822	A→C	10.2%	intergenic (‑69/+60)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,825	C→G	11.2%	intergenic (‑72/+57)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,828	G→T	10.4%	intergenic (‑75/+54)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,830	Δ1 bp	10.4%	intergenic (‑77/+52)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,839	C→T	8.2%	intergenic (‑86/+43)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	344,035	A→G	9.5%	intergenic (+121/+68)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,044	Δ1 bp	11.4%	intergenic (+130/+59)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,048:1	+T	11.1%	intergenic (+134/+55)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	354,870	G→C	6.2%	T102R (ACG→AGG)	cbcW ←	choline/betaine/carnitine ABC transporter permease
RA	354,876	A→C	7.4%	F100C (TTC→TGC)	cbcW ←	choline/betaine/carnitine ABC transporter permease
RA	354,881	G→C	8.2%	V98V (GTC→GTG)	cbcW ←	choline/betaine/carnitine ABC transporter permease
RA	354,886	G→T	6.5%	Q97K (CAG→AAG)	cbcW ←	choline/betaine/carnitine ABC transporter permease
RA	354,892	G→C	5.4%	L95V (CTG→GTG)	cbcW ←	choline/betaine/carnitine ABC transporter permease
RA	358,088	A→G	17.5%	intergenic (+53/‑77)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,090	C→T	16.5%	intergenic (+55/‑75)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,093	T→C	17.5%	intergenic (+58/‑72)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,094	G→A	17.3%	intergenic (+59/‑71)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,097	A→G	16.4%	intergenic (+62/‑68)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,099	C→T	16.4%	intergenic (+64/‑66)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	388,725	T→A	7.3%	L198Q (CTG→CAG)	soxB →	sarcosine oxidase subunit beta
RA	413,107	C→G	5.6%	A686A (GCC→GCG)	glnE →	glutamate‑ammonia‑ligase adenylyltransferase
RA	413,108	C→G	6.9%	R687G (CGC→GGC)	glnE →	glutamate‑ammonia‑ligase adenylyltransferase
RA	415,540	T→C	5.6%	L102S (TTG→TCG)	waaC →	ADP‑heptose‑‑LPS heptosyltransferase
RA	418,298	C→G	7.5%	L26L (CTC→CTG)	PP_0345 →	heptose kinase WapP
RA	418,299	C→G	7.5%	Q27E (CAG→GAG)	PP_0345 →	heptose kinase WapP
RA	428,857	Δ1 bp	7.0%	coding (153/957 nt)	PP_0351 ←	transmembrane sensor
RA	428,861:1	+C	7.5%	coding (149/957 nt)	PP_0351 ←	transmembrane sensor
RA	459,913	A→G	5.3%	intergenic (‑56/+23)	pqqB ← / ← pqqA	coenzyme PQQ synthesis protein B/coenzyme PQQ synthesis protein A
RA	460,473	T→C	5.7%	A665A (GCA→GCG)	pqqF ←	coenzyme PQQ synthesis protein F
RA	471,069	T→C	7.7%	intergenic (‑110/+18)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	471,070	G→A	7.8%	intergenic (‑111/+17)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	484,203	C→G	5.9%	G80A (GGC→GCC)	yeaG ←	protein kinase
RA	493,804	G→T	5.4%	E79* (GAA→TAA) ‡	PP_0406 →	nucleotidyltransferase family protein
RA	493,805	A→C	5.4%	E79A (GAA→GCA) ‡	PP_0406 →	nucleotidyltransferase family protein
RA	503,828	Δ1 bp	11.1%	intergenic (+28/‑123)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,834	A→T	11.7%	intergenic (+34/‑117)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,835	A→T	11.7%	intergenic (+35/‑116)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,840:1	+C	11.1%	intergenic (+40/‑111)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	524,339	A→G	8.3%	intergenic (+203/‑613)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,352	G→C	11.8%	intergenic (+216/‑600)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,355	G→C	11.5%	intergenic (+219/‑597)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	529,925	T→C	10.1%	intergenic (+19/‑165)	PP_5SC → / → birA	5S ribosomal RNA/bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA
RA	529,930	G→A	10.1%	intergenic (+24/‑160)	PP_5SC → / → birA	5S ribosomal RNA/bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA
RA	529,931	C→T	10.1%	intergenic (+25/‑159)	PP_5SC → / → birA	5S ribosomal RNA/bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA
RA	529,932	A→G	10.1%	intergenic (+26/‑158)	PP_5SC → / → birA	5S ribosomal RNA/bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA
RA	529,933	T→C	10.1%	intergenic (+27/‑157)	PP_5SC → / → birA	5S ribosomal RNA/bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA
RA	529,938	G→A	10.1%	intergenic (+32/‑152)	PP_5SC → / → birA	5S ribosomal RNA/bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA
RA	550,552	C→G	16.9%	intergenic (+30/‑112)	tufB → / → rpsJ	elongation factor Tu‑B/30S ribosomal protein S10
RA	554,155:1	+C	14.7%	coding (92/714 nt)	rpsC →	30S ribosomal protein S3
RA	554,160	Δ1 bp	13.9%	coding (97/714 nt)	rpsC →	30S ribosomal protein S3
RA	557,335	Δ1 bp	8.6%	intergenic (+75/‑134)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	557,339:1	+A	9.2%	intergenic (+79/‑130)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	565,068	G→A	5.6%	G182D (GGC→GAC)	katA →	catalase
RA	593,436	G→T	6.0%	E391* (GAG→TAG) ‡	PP_0503 →	MFS transporter
RA	593,437	A→C	6.4%	E391A (GAG→GCG) ‡	PP_0503 →	MFS transporter
RA	609,782	A→C	5.3%	L356R (CTG→CGG)	PP_0525 ←	B12 family TonB‑dependent receptor
RA	648,250	A→T	5.2%	intergenic (+16/+75)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	652,767	G→C	5.3%	intergenic (‑101/+17)	dsbD‑I ← / ← ctpL	thiol/disulfide interchange protein 1/methyl‑accepting chemotaxis protein CtpL
RA	664,889	C→T	6.3%	A584A (GCC→GCT)	yfhM →	lipoprotein
RA	664,890	A→G	6.5%	S585G (AGC→GGC)	yfhM →	lipoprotein
RA	681,298	T→A	7.6%	intergenic (+35/+34)	PP_0583 → / ← PP_0584	AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer
RA	681,300	T→C	7.7%	intergenic (+37/+32)	PP_0583 → / ← PP_0584	AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer
RA	697,206	T→C	7.3%	intergenic (+130/‑621)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,217	T→C	10.3%	intergenic (+141/‑610)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,228	C→G	22.6%	intergenic (+152/‑599)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,231	C→G	22.6%	intergenic (+155/‑596)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,242	G→A	26.2%	intergenic (+166/‑585)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,253	G→A	6.4%	intergenic (+177/‑574)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	699,725	A→G	47.6%	intergenic (+115/‑129)	PP_t06 → / → PP_23SD	tRNA‑Ala/23S ribosomal RNA
RA	702,766:1	+G	8.8%	intergenic (+11/‑121)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	702,769	Δ1 bp	8.6%	intergenic (+14/‑118)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	707,058	C→T	5.7%	intergenic (+231/+15)	PP_0599 → / ← rpsT	paraquat‑inducible protein B/30S ribosomal protein S20
RA	710,120	C→A	7.9%	L288M (CTG→ATG) ‡	ribF →	bifunctional riboflavin kinase/FMN adenylyltransferase
RA	710,121	T→G	8.0%	L288R (CTG→CGG) ‡	ribF →	bifunctional riboflavin kinase/FMN adenylyltransferase
RA	715,012:1	+T	13.6%	intergenic (+75/+2)	ispH → / ← PP_0607	4‑hydroxy‑3‑methylbut‑2‑enyl diphosphate reductase/type IV pili biogenesis protein FimT
RA	715,019	Δ1 bp	14.1%	coding (478/483 nt)	PP_0607 ←	type IV pili biogenesis protein FimT
RA	727,318	C→T	8.8%	W6* (TGG→TAG) ‡	PP_0621 ←	hypothetical protein
RA	727,319	A→T	7.4%	W6R (TGG→AGG) ‡	PP_0621 ←	hypothetical protein
RA	727,320	A→G	7.3%	P5P (CCT→CCC)	PP_0621 ←	hypothetical protein
RA	733,648	A→T	10.9%	intergenic (+19/‑28)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	733,649	A→T	10.8%	intergenic (+20/‑27)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	733,650	A→T	14.0%	intergenic (+21/‑26)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	743,433	G→A	7.2%	intergenic (+109/+165)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,435	A→C	7.5%	intergenic (+111/+163)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,442	T→G	6.7%	intergenic (+118/+156)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,443	T→A	7.1%	intergenic (+119/+155)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,444	C→A	6.7%	intergenic (+120/+154)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,451	G→T	7.4%	intergenic (+127/+147)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,453	T→C	7.4%	intergenic (+129/+145)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,463	A→G	7.7%	intergenic (+139/+135)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	755,850	C→A	6.5%	P148Q (CCG→CAG)	PP_0646 →	hypothetical protein
RA	755,882	T→C	5.7%	S159P (TCG→CCG)	PP_0646 →	hypothetical protein
RA	780,559	A→C	7.7%	intergenic (‑86/+36)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,561	T→A	7.7%	intergenic (‑88/+34)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,563	G→T	6.9%	intergenic (‑90/+32)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	850,889	T→A	5.7%	intergenic (‑469/‑336)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	850,891	A→T	5.7%	intergenic (‑471/‑334)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	850,976	A→C	5.1%	intergenic (‑556/‑249)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	871,189	G→C	5.2%	intergenic (+34/+41)	PP_0753 → / ← PP_0754	lipoprotein/hypothetical protein
RA	895,201	G→C	5.5%	intergenic (+38/+26)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,204	T→C	7.9%	intergenic (+41/+23)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,210	G→C	8.2%	intergenic (+47/+17)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,213	G→C	6.9%	intergenic (+50/+14)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,219	G→A	7.0%	intergenic (+56/+8)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,222	G→C	8.2%	intergenic (+59/+5)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	914,647:1	+C	6.2%	coding (1355/1743 nt)	fruA →	PTS fructose transporter subunit IIBC
RA	941,936	A→G	5.1%	V1230A (GTC→GCC)	PP_0806 ←	surface adhesion protein
RA	947,239	G→C	5.5%	L45V (CTG→GTG)	norR ←	DNA‑binding transcriptional regulator
RA	949,138	C→A	5.9%	intergenic (+433/‑24)	hmp → / → dsbB	flavohemoprotein/disulfide bond formation protein B
RA	966,598	A→T	5.4%	L41* (TTG→TAG) ‡	PP_0828 ←	membrane protein
RA	966,599	A→T	5.3%	L41M (TTG→ATG) ‡	PP_0828 ←	membrane protein
RA	970,240	T→G	7.6%	F29C (TTC→TGC) ‡	tgt →	queuine tRNA‑ribosyltransferase
RA	970,241	C→A	7.3%	F29L (TTC→TTA) ‡	tgt →	queuine tRNA‑ribosyltransferase
RA	975,290	A→T	6.8%	intergenic (+136/+33)	ycfJ → / ← suhB	flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase
RA	975,291	A→T	6.8%	intergenic (+137/+32)	ycfJ → / ← suhB	flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase
RA	978,168	G→A	5.8%	R51H (CGC→CAC)	iscR →	DNA‑binding transcriptional regulator IscR
RA	981,580	G→A	6.8%	A152T (GCG→ACG)	hscA →	DnaK‑like molecular chaperone
RA	981,593	T→C	5.1%	V156A (GTG→GCG)	hscA →	DnaK‑like molecular chaperone
RA	990,700	T→A	10.3%	L193Q (CTG→CAG)	PP_0856 →	lipoprotein
RA	991,557	G→A	6.8%	G59D (GGT→GAT)	der →	GTPase Der
RA	991,560	T→C	6.5%	I60T (ATC→ACC)	der →	GTPase Der
RA	994,950	T→A	7.8%	intergenic (+26/+99)	PP_0859 → / ← PP_0860	ketoglutaramate omega‑amidase/sulfite reductase flavoprotein subunit
RA	994,951	T→A	7.8%	intergenic (+27/+98)	PP_0859 → / ← PP_0860	ketoglutaramate omega‑amidase/sulfite reductase flavoprotein subunit
RA	997,725	T→C	5.9%	intergenic (‑127/+105)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	997,726	C→T	5.8%	intergenic (‑128/+104)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	997,736	A→G	5.2%	intergenic (‑138/+94)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	1,007,691	C→A	5.3%	E354* (GAG→TAG)	yehX ←	ABC transporter ATP‑binding protein
RA	1,013,231	A→T	8.4%	intergenic (+56/+75)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,237	C→A	8.5%	intergenic (+62/+69)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,238	A→T	7.8%	intergenic (+63/+68)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,244	G→C	9.2%	intergenic (+69/+62)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,245	G→C	10.3%	intergenic (+70/+61)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,251	A→T	8.1%	intergenic (+76/+55)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,252	T→G	8.4%	intergenic (+77/+54)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,258	A→T	8.8%	intergenic (+83/+48)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,031,922	T→A	6.3%	L5M (TTG→ATG) ‡	PP_0889 →	hypothetical protein
RA	1,031,923	T→A	6.0%	L5* (TTG→TAG) ‡	PP_0889 →	hypothetical protein
RA	1,033,605	T→A	5.0%	I74I (ATT→ATA)	PP_0891 →	hypothetical protein
RA	1,058,260	Δ1 bp	7.5%	intergenic (‑186/+34)	PP_0914 ← / ← sodB	GGDEF domain‑containing protein/superoxide dismutase
RA	1,058,264:1	+T	7.6%	intergenic (‑190/+30)	PP_0914 ← / ← sodB	GGDEF domain‑containing protein/superoxide dismutase
RA	1,070,265	G→C	17.1%	intergenic (+62/+82)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,268	G→C	18.9%	intergenic (+65/+79)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,130,198	A→T	6.8%	intergenic (‑247/+57)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,145,439	C→T	22.1%	intergenic (‑100/+41)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,446	G→A	20.7%	intergenic (‑107/+34)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,447	T→C	20.6%	intergenic (‑108/+33)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,454	A→G	15.3%	intergenic (‑115/+26)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,184,591	G→C	11.4%	intergenic (‑201/‑211)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,594	G→C	10.4%	intergenic (‑204/‑208)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,611	C→T	6.6%	intergenic (‑221/‑191)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,189,041	A→G	8.0%	intergenic (+25/+17)	PP_1038 → / ← tatC‑I	hypothetical protein/Sec‑independent protein translocase protein
RA	1,189,042	C→T	8.0%	intergenic (+26/+16)	PP_1038 → / ← tatC‑I	hypothetical protein/Sec‑independent protein translocase protein
RA	1,239,099	C→G	5.1%	intergenic (‑68/‑307)	argF ← / → PP_1080	ornithine carbamoyltransferase/molybdopterin‑binding oxidoreductase
RA	1,239,109	A→C	5.1%	intergenic (‑78/‑297)	argF ← / → PP_1080	ornithine carbamoyltransferase/molybdopterin‑binding oxidoreductase
RA	1,241,968:1	+T	10.1%	intergenic (+27/+31)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,241,973	Δ1 bp	8.7%	intergenic (+32/+26)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,245,336	G→C	16.0%	A66A (GCC→GCG)	pyrC ←	dihydroorotase
RA	1,245,340	G→C	16.1%	P65R (CCG→CGG)	pyrC ←	dihydroorotase
RA	1,245,344	G→C	15.1%	R64G (CGC→GGC)	pyrC ←	dihydroorotase
RA	1,253,435	G→C	5.0%	intergenic (‑75/+32)	PP_1096 ← / ← metG	electron transport complex protein/methionine‑‑tRNA ligase
RA	1,256,887	A→T	7.5%	noncoding (434/451 nt)	PP_mr14 ←	cspA regulatory region
RA	1,256,888	G→T	7.4%	noncoding (433/451 nt)	PP_mr14 ←	cspA regulatory region
RA	1,256,889	A→C	7.9%	noncoding (432/451 nt)	PP_mr14 ←	cspA regulatory region
RA	1,256,890	A→T	7.6%	noncoding (431/451 nt)	PP_mr14 ←	cspA regulatory region
RA	1,264,630	G→C	5.1%	R266G (CGG→GGG)	PP_1106 ←	hypothetical protein
RA	1,296,596	G→T	15.7%	intergenic (‑343/‑223)	nhaA‑I ← / → PP_1133	Na(+)/H(+) antiporter NhaA/transposase
RA	1,296,597	G→A	15.8%	intergenic (‑344/‑222)	nhaA‑I ← / → PP_1133	Na(+)/H(+) antiporter NhaA/transposase
RA	1,296,598	T→C	15.8%	intergenic (‑345/‑221)	nhaA‑I ← / → PP_1133	Na(+)/H(+) antiporter NhaA/transposase
RA	1,296,599	A→C	16.2%	intergenic (‑346/‑220)	nhaA‑I ← / → PP_1133	Na(+)/H(+) antiporter NhaA/transposase
RA	1,296,606	G→A	30.7%	intergenic (‑353/‑213)	nhaA‑I ← / → PP_1133	Na(+)/H(+) antiporter NhaA/transposase
RA	1,300,028:1	+G	5.5%	coding (156/1608 nt)	PP_1134 ←	hypothetical protein
RA	1,300,033	Δ1 bp	5.1%	coding (151/1608 nt)	PP_1134 ←	hypothetical protein
RA	1,327,127	C→T	50.5%	intergenic (+97/‑196)	PP_16SE → / → PP_23SE	16S ribosomal RNA/23S ribosomal RNA
RA	1,330,507	G→A	7.4%	intergenic (+32/‑275)	PP_5SE → / → PP_1157	5S ribosomal RNA/acetolactate synthase
RA	1,344,106	G→T	7.3%	P13T (CCT→ACT)	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,113	G→C	8.8%	A10A (GCC→GCG) ‡	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,114	G→C	7.9%	A10G (GCC→GGC) ‡	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,121	A→C	7.9%	C8G (TGC→GGC)	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,356,411	G→C	9.1%	G94A (GGC→GCC)	PP_1181 →	two‑component system response regulator
RA	1,364,664	A→T	5.5%	intergenic (+28/+121)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,665	A→T	5.6%	intergenic (+29/+120)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,666	A→T	5.5%	intergenic (+30/+119)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,376,327	A→T	9.3%	intergenic (+30/+19)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,328	G→C	9.3%	intergenic (+31/+18)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,329	A→T	9.4%	intergenic (+32/+17)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,383,260	A→T	9.5%	L16Q (CTG→CAG)	PP_1204 ←	lipoprotein
JC	1,385,477	Δ42 bp	46.3%	coding (945‑986/1266 nt)	oprD ←	basic amino acid specific porin OprD
JC	1,385,534	Δ69 bp	100%	coding (861‑929/1266 nt)	oprD ←	basic amino acid specific porin OprD
RA	1,391,322	A→G	6.1%	I375V (ATC→GTC)	aspS →	aspartate‑‑tRNA ligase
RA	1,392,045	G→A	9.3%	intergenic (+70/‑45)	aspS → / → PP_1214	aspartate‑‑tRNA ligase/transcriptional regulator
RA	1,392,047	C→G	9.4%	intergenic (+72/‑43)	aspS → / → PP_1214	aspartate‑‑tRNA ligase/transcriptional regulator
RA	1,392,049	T→C	9.2%	intergenic (+74/‑41)	aspS → / → PP_1214	aspartate‑‑tRNA ligase/transcriptional regulator
RA	1,403,596	G→A	15.2%	intergenic (‑56/+25)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,403,597	T→C	15.0%	intergenic (‑57/+24)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,442,663	G→C	6.0%	P136R (CCG→CGG)	ghrB ←	2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase
RA	1,444,440	C→A	45.2%	L19L (CTC→CTA)	PP_1263 →	fusaric acid resistance protein
RA	1,449,146	T→C	8.7%	*287R (TGA→CGA) ‡	PP_1266 →	fusaric acid resistance protein
RA	1,449,147	G→A	8.7%	*287* (TGA→TAA) ‡	PP_1266 →	fusaric acid resistance protein
RA	1,458,124	T→G	13.0%	intergenic (+17/+23)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,458,126	A→T	14.1%	intergenic (+19/+21)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,458,128	C→A	14.3%	intergenic (+21/+19)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,464,207	T→C	5.3%	Q473R (CAG→CGG)	algX ←	alginate biosynthesis protein AlgX
RA	1,469,815	A→G	7.4%	V112A (GTG→GCG)	algK ←	alginate biosynthesis protein AlgK
RA	1,469,818	A→T	8.7%	L111Q (CTG→CAG)	algK ←	alginate biosynthesis protein AlgK
RA	1,469,821	A→T	8.4%	L110Q (CTG→CAG)	algK ←	alginate biosynthesis protein AlgK
RA	1,469,824	C→T	8.0%	R109H (CGC→CAC)	algK ←	alginate biosynthesis protein AlgK
RA	1,479,134	C→T	5.2%	A64V (GCG→GTG)	moaC →	cyclic pyranopterin monophosphate synthase accessory protein
RA	1,504,076	T→A	13.5%	intergenic (+34/‑229)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,504,077	T→A	13.5%	intergenic (+35/‑228)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,506,932	A→G	21.2%	intergenic (+44/‑73)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,936	G→A	20.6%	intergenic (+48/‑69)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,939	T→C	20.3%	intergenic (+51/‑66)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,943	C→T	19.8%	intergenic (+55/‑62)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,508,087	G→A	6.2%	intergenic (+17/+45)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,088	G→T	6.2%	intergenic (+18/+44)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,089	A→C	6.2%	intergenic (+19/+43)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,090	T→C	6.2%	intergenic (+20/+42)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,509,433	T→G	6.3%	H110P (CAT→CCT)	PP_1324 ←	endonuclease
RA	1,509,437	G→A	6.2%	H109Y (CAC→TAC)	PP_1324 ←	endonuclease
RA	1,509,444	C→A	6.4%	Q106H (CAG→CAT)	PP_1324 ←	endonuclease
RA	1,521,026	C→G	5.4%	L81V (CTG→GTG)	murD →	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
RA	1,521,032	T→A	5.3%	L83M (TTG→ATG)	murD →	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
RA	1,541,452	G→A	6.8%	Q39* (CAG→TAG)	panE ←	2‑dehydropantoate 2‑reductase
RA	1,544,531	C→A	8.1%	intergenic (+48/+66)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,534	G→C	7.7%	intergenic (+51/+63)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,536	C→G	8.1%	intergenic (+53/+61)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,541	C→G	8.1%	intergenic (+58/+56)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,543	G→C	7.9%	intergenic (+60/+54)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,546	T→G	7.2%	intergenic (+63/+51)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,551,324	G→T	9.0%	intergenic (+41/+85)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,551,327	A→C	9.0%	intergenic (+44/+82)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,592,024	C→A	15.0%	intergenic (‑89/‑114)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,592,029	T→G	14.4%	intergenic (‑94/‑109)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,592,046	G→C	5.6%	intergenic (‑111/‑92)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,611,142	A→T	6.2%	A326A (GCT→GCA)	PP_1412 ←	3‑hydroxyisobutyryl‑CoA hydrolase
RA	1,611,149	A→T	6.0%	V324E (GTG→GAG)	PP_1412 ←	3‑hydroxyisobutyryl‑CoA hydrolase
RA	1,612,291	G→A	5.7%	A16T (GCA→ACA)	ung →	uracil‑DNA glycosylase
RA	1,621,919	T→C	5.5%	L264P (CTG→CCG) ‡	PP_1421 →	sensor histidine kinase TctE
RA	1,621,920	G→A	5.5%	L264L (CTG→CTA) ‡	PP_1421 →	sensor histidine kinase TctE
RA	1,631,135	T→C	7.7%	intergenic (+27/‑154)	PP_1430 → / → lepA	DegP‑like serine endoprotease/elongation factor 4
RA	1,631,136	T→G	7.6%	intergenic (+28/‑153)	PP_1430 → / → lepA	DegP‑like serine endoprotease/elongation factor 4
RA	1,631,137	C→A	6.8%	intergenic (+29/‑152)	PP_1430 → / → lepA	DegP‑like serine endoprotease/elongation factor 4
RA	1,631,138	G→A	7.0%	intergenic (+30/‑151)	PP_1430 → / → lepA	DegP‑like serine endoprotease/elongation factor 4
RA	1,633,966	C→T	6.8%	intergenic (+18/‑146)	lepB → / → rnc	signal peptidase I/ribonuclease 3
RA	1,633,968	G→C	6.8%	intergenic (+20/‑144)	lepB → / → rnc	signal peptidase I/ribonuclease 3
RA	1,633,969	C→T	6.9%	intergenic (+21/‑143)	lepB → / → rnc	signal peptidase I/ribonuclease 3
RA	1,633,970	A→G	6.8%	intergenic (+22/‑142)	lepB → / → rnc	signal peptidase I/ribonuclease 3
RA	1,637,367	A→T	7.0%	intergenic (+34/+32)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,368	A→T	7.0%	intergenic (+35/+31)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,378	G→A	7.4%	intergenic (+45/+21)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,384	A→G	5.3%	intergenic (+51/+15)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,386	C→T	5.3%	intergenic (+53/+13)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,639,617	C→T	7.6%	intergenic (‑165/‑146)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,618	G→T	8.5%	intergenic (‑166/‑145)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,622	G→A	8.0%	intergenic (‑170/‑141)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,623	T→C	8.2%	intergenic (‑171/‑140)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,627	A→C	8.1%	intergenic (‑175/‑136)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,628	A→G	8.1%	intergenic (‑176/‑135)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,638	C→T	9.4%	intergenic (‑186/‑125)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,642,306	G→A	12.1%	intergenic (‑92/+60)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,313	G→C	11.7%	intergenic (‑99/+53)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,319	Δ1 bp	9.6%	intergenic (‑105/+47)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,321:1	+C	9.8%	intergenic (‑107/+45)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,327	G→C	11.1%	intergenic (‑113/+39)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,334	T→C	8.4%	intergenic (‑120/+32)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,343	G→A	8.4%	intergenic (‑129/+23)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,345	C→T	7.9%	intergenic (‑131/+21)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,667,944	A→G	5.4%	S302G (AGC→GGC)	ffh →	signal recognition particle GTPase subunit
RA	1,672,782	T→C	5.8%	D50G (GAC→GGC)	PP_1467 ←	NhaP‑type Na+(K+)/H+ antiporter
RA	1,683,293	C→G	6.9%	intergenic (+60/‑171)	recJ → / → PP_1478	ssDNA‑specific exonuclease RecJ/xenobiotic reductase
RA	1,684,319	G→A	5.7%	E286K (GAG→AAG)	PP_1478 →	xenobiotic reductase
RA	1,691,815	C→G	5.9%	intergenic (+40/‑131)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,825	C→A	7.6%	intergenic (+50/‑121)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,828	T→G	8.7%	intergenic (+53/‑118)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,693,834	C→G	5.8%	R87R (CGC→CGG)	PP_1489 →	CheW domain‑containing protein
RA	1,698,793:1	+T	6.9%	coding (499/1014 nt)	cheBC →	chemotaxis response regulator protein‑glutamate methylesterase
RA	1,698,797	Δ1 bp	6.4%	coding (503/1014 nt)	cheBC →	chemotaxis response regulator protein‑glutamate methylesterase
RA	1,703,290	A→G	9.7%	intergenic (+97/‑70)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,292	G→C	8.4%	intergenic (+99/‑68)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,294	C→T	8.4%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,294:1	+T	14.6%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,321	G→A	5.0%	intergenic (+128/‑39)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,712,122	A→T	6.0%	intergenic (+71/‑187)	ppc → / → adk	phosphoenolpyruvate carboxylase/adenylate kinase
RA	1,712,993	T→A	14.8%	intergenic (+34/‑106)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,712,994	T→A	14.8%	intergenic (+35/‑105)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,725,974	C→A	6.1%	M744I (ATG→ATT)	plsB ←	glycerol‑3‑phosphate acyltransferase
RA	1,779,105	G→A	6.0%	L241L (CTG→CTA)	PP_1587 →	NhaP‑type Na+(K+)/H+ antiporter
RA	1,780,171	T→C	5.1%	intergenic (+88/+18)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,788,832	T→A	6.8%	L88Q (CTG→CAG)	uppS →	(2E,6E)‑farnesyl‑diphosphate specific ditrans,polycis‑undecaprenyl‑diphosphate synthase
RA	1,788,839	T→A	5.7%	R90R (CGT→CGA)	uppS →	(2E,6E)‑farnesyl‑diphosphate specific ditrans,polycis‑undecaprenyl‑diphosphate synthase
RA	1,795,768	G→T	5.6%	E12* (GAG→TAG)	lpxD →	UDP‑3‑O‑acylglucosamine N‑acyltransferase
RA	1,810,377	T→G	8.3%	intergenic (+96/‑73)	eno → / → ftsB	enolase/cell division protein
RA	1,810,378	C→A	7.7%	intergenic (+97/‑72)	eno → / → ftsB	enolase/cell division protein
RA	1,822,232	A→C	6.8%	intergenic (+32/+26)	PP_mr22 → / ← fdxA	PrrB_RsmZ ncRNA/ferredoxin 1
RA	1,846,339	Δ1 bp	5.8%	coding (588/1377 nt)	pfeS‑II →	histidine kinase
RA	1,846,345:1	+A	5.7%	coding (594/1377 nt)	pfeS‑II →	histidine kinase
RA	1,851,650	C→T	94.1%	R232W (CGG→TGG)	relA →	ATP:GTP 3'‑pyrophosphotransferase
RA	1,859,504	A→T	6.2%	intergenic (‑54/+102)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,505	A→T	6.3%	intergenic (‑55/+101)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,569	A→C	7.3%	intergenic (‑119/+37)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,571	T→A	7.4%	intergenic (‑121/+35)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,573	G→T	7.5%	intergenic (‑123/+33)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,863,282	T→A	6.3%	L309Q (CTG→CAG)	PP_1666 →	hypothetical protein
RA	1,875,398	T→C	5.0%	V27A (GTG→GCG) ‡	cobS →	adenosylcobinamide‑GDP ribazoletransferase
RA	1,875,399	G→A	5.0%	V27V (GTG→GTA) ‡	cobS →	adenosylcobinamide‑GDP ribazoletransferase
RA	1,875,400	A→T	5.2%	S28C (AGC→TGC)	cobS →	adenosylcobinamide‑GDP ribazoletransferase
RA	1,875,404	T→C	5.4%	L29P (CTG→CCG)	cobS →	adenosylcobinamide‑GDP ribazoletransferase
RA	1,875,406	C→G	5.8%	P30A (CCG→GCG)	cobS →	adenosylcobinamide‑GDP ribazoletransferase
RA	1,903,567	G→C	9.5%	intergenic (+50/‑221)	PP_1703 → / → nirB	assimilatory nitrate reductase/sulfite reductase/nitrite reductase large subunit
RA	1,903,568	G→C	9.4%	intergenic (+51/‑220)	PP_1703 → / → nirB	assimilatory nitrate reductase/sulfite reductase/nitrite reductase large subunit
RA	1,906,818	A→G	5.6%	intergenic (+116/+12)	nirD → / ← PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
RA	1,909,797	C→T	5.7%	V353M (GTG→ATG)	PP_1710 ←	phthalate permease family MFS transporter
RA	1,921,591	T→A	22.1%	intergenic (+24/+37)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,921,592	T→A	21.9%	intergenic (+25/+36)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,955,252	T→A	7.9%	intergenic (+39/‑154)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,955,253	T→A	7.8%	intergenic (+40/‑153)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,964,757	A→T	5.6%	Q309L (CAG→CTG)	yegE →	phosphodiesterase domain‑containing diguanylate cyclase
RA	1,993,644:1	+T	9.0%	intergenic (+39/+59)	PP_1780 → / ← PP_1781	mannosyltransferase/acyltransferase
RA	1,993,647	Δ1 bp	9.0%	intergenic (+42/+56)	PP_1780 → / ← PP_1781	mannosyltransferase/acyltransferase
RA	2,007,281	G→A	12.5%	L42L (CTG→TTG)	PP_1790 ←	acylneuraminate cytidylyltransferase
RA	2,007,282	T→C	12.9%	Q41Q (CAA→CAG)	PP_1790 ←	acylneuraminate cytidylyltransferase
RA	2,013,746	C→A	7.0%	A107S (GCA→TCA)	PP_1793 ←	group 2 family glycosyl transferase
RA	2,033,421	C→A	6.4%	L287M (CTG→ATG)	pgi‑I →	glucose 6‑phosphate isomerase
RA	2,039,573	C→A	6.2%	intergenic (‑51/+71)	rffE ← / ← PP_1812	UDP‑N‑acetylglucosamine‑2‑epimerase/hypothetical protein
RA	2,039,746	A→C	7.5%	P33P (CCT→CCG) ‡	PP_1812 ←	hypothetical protein
RA	2,039,747	G→T	7.7%	P33H (CCT→CAT) ‡	PP_1812 ←	hypothetical protein
RA	2,042,207	C→T	6.1%	G131D (GGC→GAC)	PP_1816 ←	alcohol dehydrogenase
RA	2,049,347	A→C	6.3%	intergenic (‑33/+27)	PP_1822 ← / ← folEA‑I	hypothetical protein/GTP cyclohydrolase I
RA	2,051,108	T→A	6.2%	intergenic (‑63/+23)	PP_1825 ← / ← PP_1826	hypothetical protein/isochorismatase family hydrolase
RA	2,061,913	A→T	5.2%	Q262L (CAG→CTG)	PP_1838 →	membrane protein
RA	2,063,244	G→A	5.0%	intergenic (+58/‑149)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,063,248	T→C	5.4%	intergenic (+62/‑145)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,087,745	G→C	5.4%	intergenic (+515/+403)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,781	Δ1 bp	6.0%	intergenic (+551/+367)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,092,469	T→A	6.6%	intergenic (+72/+19)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,092,470	T→A	6.6%	intergenic (+73/+18)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,100,098	G→C	6.7%	intergenic (‑166/‑39)	PP_1875 ← / → PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
RA	2,100,099	C→A	6.7%	intergenic (‑167/‑38)	PP_1875 ← / → PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
RA	2,100,110	A→G	6.1%	intergenic (‑178/‑27)	PP_1875 ← / → PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
RA	2,127,093	G→A	5.5%	R807R (CGG→CGA)	PP_1887 →	hypothetical protein
RA	2,134,314	A→C	6.1%	intergenic (‑37/+32)	PP_1892 ← / ← fadE	hypothetical protein/medium‑long chain acyl‑CoA dehydrogenase
RA	2,138,452	T→G	9.9%	L171R (CTG→CGG)	yadG →	ABC transporter ATP‑binding protein
RA	2,138,457	C→A	9.8%	R173S (CGC→AGC)	yadG →	ABC transporter ATP‑binding protein
RA	2,154,102	T→A	6.5%	intergenic (+112/+98)	PP_1908 → / ← PP_1909	putative Peptidase/septum formation protein
RA	2,154,103	T→A	7.3%	intergenic (+113/+97)	PP_1908 → / ← PP_1909	putative Peptidase/septum formation protein
RA	2,166,751	T→A	5.0%	intergenic (‑552/‑229)	PP_5483 ← / → PP_1921	hypothetical protein/hypothetical protein
RA	2,166,752	T→G	5.3%	intergenic (‑553/‑228)	PP_5483 ← / → PP_1921	hypothetical protein/hypothetical protein
RA	2,175,418	G→A	6.4%	L390L (CTG→TTG)	arsB‑I ←	arsenite/antimonite transporter
RA	2,227,465	T→A	6.1%	intergenic (‑21/‑426)	PP_1964 ← / → holB	dGMP/dTMP/dhydroxyCMP kinase/DNA polymerase III subunit delta'
RA	2,265,711	A→C	7.6%	E243A (GAG→GCG)	folC →	bifunctional folypolyglutamate synthase/dihydrofolate synthase
RA	2,265,714	T→A	6.9%	L244Q (CTG→CAG)	folC →	bifunctional folypolyglutamate synthase/dihydrofolate synthase
RA	2,265,717	G→T	6.9%	R245L (CGC→CTC)	folC →	bifunctional folypolyglutamate synthase/dihydrofolate synthase
RA	2,273,095	A→G	7.6%	intergenic (+17/+274)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,105	C→G	16.7%	intergenic (+27/+264)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,109	A→T	16.9%	intergenic (+31/+260)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,113	C→G	17.1%	intergenic (+35/+256)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,123	C→T	8.6%	intergenic (+45/+246)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,282,773	T→C	7.8%	intergenic (‑122/+107)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,780	T→G	7.7%	intergenic (‑129/+100)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,813	T→G	17.2%	intergenic (‑162/+67)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,817	G→C	13.2%	intergenic (‑166/+63)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,818	G→C	13.4%	intergenic (‑167/+62)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,822	C→A	15.0%	intergenic (‑171/+58)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,295,903	C→A	5.5%	intergenic (+106/+27)	PP_5496 → / ← PP_2023	hypothetical protein/glutathione S‑transferase family protein
RA	2,296,137	Δ1 bp	5.9%	coding (393/600 nt)	PP_2023 ←	glutathione S‑transferase family protein
RA	2,296,144	T→G	6.6%	E129A (GAG→GCG) ‡	PP_2023 ←	glutathione S‑transferase family protein
RA	2,296,145	C→A	5.7%	E129* (GAG→TAG) ‡	PP_2023 ←	glutathione S‑transferase family protein
RA	2,296,475	G→T	6.3%	L19M (CTG→ATG)	PP_2023 ←	glutathione S‑transferase family protein
RA	2,296,479	C→T	7.0%	A17A (GCG→GCA)	PP_2023 ←	glutathione S‑transferase family protein
RA	2,296,482	A→G	6.8%	R16R (CGT→CGC)	PP_2023 ←	glutathione S‑transferase family protein
RA	2,296,486	A→C	6.8%	M15R (ATG→AGG)	PP_2023 ←	glutathione S‑transferase family protein
RA	2,301,538	C→A	6.1%	intergenic (‑139/‑192)	sbcD ← / → PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
RA	2,340,746	A→C	12.2%	intergenic (+37/‑78)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,340,750	G→A	13.0%	intergenic (+41/‑74)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,340,751	T→A	13.2%	intergenic (+42/‑73)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,340,752	T→C	11.8%	intergenic (+43/‑72)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,340,756	G→T	13.2%	intergenic (+47/‑68)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,344,731:1	+C	6.5%	intergenic (‑39/+36)	PP_2061 ← / ← PP_2062	hypothetical protein/hypothetical protein
RA	2,344,736	T→G	7.0%	intergenic (‑44/+31)	PP_2061 ← / ← PP_2062	hypothetical protein/hypothetical protein
RA	2,388,379	C→G	9.0%	intergenic (+73/+71)	pyrD → / ← rmf	dihydroorotate dehydrogenase/ribosome modulation factor
RA	2,389,948	G→T	6.3%	A256S (GCG→TCG)	rlmKL →	23S rRNA (guanine(2445)‑N(2))/(guanine(2069)‑N(7))‑ methyltransferase
RA	2,395,626	G→C	6.9%	intergenic (‑191/+52)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,395,628	A→T	6.9%	intergenic (‑193/+50)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,395,630	G→C	7.1%	intergenic (‑195/+48)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,405,417	C→T	5.9%	T124M (ACG→ATG)	PP_2108 →	hypothetical protein
RA	2,416,597	A→T	6.4%	intergenic (+87/+28)	pdxB → / ← PP_2118	erythronate‑4‑phosphate dehydrogenase/hypothetical protein
RA	2,416,598	A→T	6.4%	intergenic (+88/+27)	pdxB → / ← PP_2118	erythronate‑4‑phosphate dehydrogenase/hypothetical protein
RA	2,420,641	Δ1 bp	12.0%	intergenic (+81/+26)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,420,645:1	+T	12.5%	intergenic (+85/+22)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,444,458	A→C	14.3%	*159G (TGA→GGA)	sulA ←	cell division inhibitor SulA
RA	2,444,462	G→T	14.4%	L157L (CTC→CTA) ‡	sulA ←	cell division inhibitor SulA
RA	2,444,463	A→C	14.3%	L157R (CTC→CGC) ‡	sulA ←	cell division inhibitor SulA
RA	2,444,467	G→T	16.6%	R156S (CGC→AGC)	sulA ←	cell division inhibitor SulA
RA	2,486,224	C→G	6.9%	A258G (GCC→GGC)	spuC‑I →	polyamine:pyruvate transaminase
RA	2,488,222	T→C	5.1%	intergenic (+35/‑367)	PP_2182 → / → PP_2183	hypothetical protein/formate dehydrogenase subunit gamma
RA	2,509,064	A→G	5.9%	C32R (TGC→CGC)	PP_2203 ←	hypothetical protein
RA	2,517,056	A→T	5.8%	N125I (AAT→ATT)	PP_2210 →	LysR family transcriptional regulator
RA	2,540,852	T→A	6.4%	intergenic (+22/+27)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,540,853	G→C	6.4%	intergenic (+23/+26)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,540,854	T→A	5.9%	intergenic (+24/+25)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,546,866	T→C	10.9%	intergenic (+22/+18)	PP_2238 → / ← PP_5504	metallopeptidase/hypothetical protein
RA	2,546,869	G→A	10.9%	intergenic (+25/+15)	PP_2238 → / ← PP_5504	metallopeptidase/hypothetical protein
RA	2,560,505	T→A	8.6%	W142R (TGG→AGG) ‡	PP_2243 →	hypothetical protein
RA	2,560,507	G→C	8.6%	W142C (TGG→TGC) ‡	PP_2243 →	hypothetical protein
RA	2,560,509	T→A	8.6%	L143Q (CTG→CAG)	PP_2243 →	hypothetical protein
RA	2,568,736	T→A	9.0%	Q285H (CAA→CAT)	PP_2252 ←	hypothetical protein
RA	2,568,739	T→G	8.7%	E284D (GAA→GAC)	PP_2252 ←	hypothetical protein
RA	2,568,744	C→A	8.3%	V283F (GTC→TTC)	PP_2252 ←	hypothetical protein
RA	2,568,747	T→A	7.4%	M282L (ATG→TTG)	PP_2252 ←	hypothetical protein
RA	2,577,392	T→C	5.4%	Q349R (CAG→CGG)	PP_2259 ←	sigma‑54 dependent transcriptional regulator
RA	2,628,429	A→C	7.5%	A16A (GCA→GCC)	clpP →	ATP‑dependent Clp protease proteolytic subunit
RA	2,628,430	G→T	8.2%	G17C (GGC→TGC)	clpP →	ATP‑dependent Clp protease proteolytic subunit
RA	2,635,624	C→T	5.8%	L331L (CTG→CTA) ‡	PP_2305 ←	hypothetical protein
RA	2,635,625	A→G	5.5%	L331P (CTG→CCG) ‡	PP_2305 ←	hypothetical protein
RA	2,645,153	T→C	5.2%	E735G (GAG→GGG)	PP_2316 ←	ABC transporter permease
RA	2,650,203	A→T	7.1%	intergenic (+99/+35)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,650,204	A→T	6.9%	intergenic (+100/+34)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,651,319	G→C	13.0%	intergenic (+41/+29)	PP_2323 → / ← aroF‑I	hypothetical protein/tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
RA	2,652,765	A→G	6.6%	S37G (AGC→GGC)	PP_2325 →	2‑dehydropantoate 2‑reductase
RA	2,669,714	T→G	6.2%	intergenic (+38/+37)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,708,585	A→G	5.7%	W223R (TGG→CGG)	cysI ←	sulfite reductase hemoprotein subunit beta
RA	2,708,586	C→T	6.1%	P222P (CCG→CCA)	cysI ←	sulfite reductase hemoprotein subunit beta
RA	2,714,292	G→T	5.3%	G285G (GGC→GGA)	metH ←	cobalamin‑dependent methionine synthase
RA	2,717,206	G→C	5.4%	A626A (GCG→GCC)	cti →	esterified fatty acid cis/trans isomerase
RA	2,749,325	C→T	6.7%	H98Y (CAC→TAC) ‡	PP_2405 →	hypothetical protein
RA	2,749,326	A→G	7.4%	H98R (CAC→CGC) ‡	PP_2405 →	hypothetical protein
RA	2,777,050	C→G	5.9%	W166C (TGG→TGC)	PP_2429 ←	membrane protein
RA	2,788,121	T→A	8.0%	V134D (GTC→GAC)	ahpF →	alkyl hydroperoxide reductase subunit F
RA	2,788,127	A→G	7.1%	Q136R (CAG→CGG)	ahpF →	alkyl hydroperoxide reductase subunit F
RA	2,799,214	A→G	16.5%	intergenic (‑185/+31)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,220	C→T	16.7%	intergenic (‑191/+25)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,223	A→G	16.1%	intergenic (‑194/+22)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,229	C→T	12.9%	intergenic (‑200/+16)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,863,818	C→T	6.3%	H279Y (CAC→TAC)	gllR →	HTH‑type transcriptional regulator GalR
RA	2,882,554	A→G	5.9%	*103W (TAG→TGG)	PP_2537 →	hypothetical protein
RA	2,882,557	C→T	5.7%	intergenic (+2/‑78)	PP_2537 → / → PP_2538	hypothetical protein/hypothetical protein
RA	2,889,586	A→T	5.4%	N184I (AAC→ATC)	gabP‑II →	gamma‑aminobutyrate permease
RA	2,909,327	T→C	8.3%	Q385R (CAG→CGG) ‡	aprDA ←	alkaline protease secretion ABC transporter ATP‑binding protein
RA	2,909,328	G→A	7.2%	Q385* (CAG→TAG) ‡	aprDA ←	alkaline protease secretion ABC transporter ATP‑binding protein
RA	2,941,370	T→G	6.7%	S187A (TCG→GCG)	PP_2574 →	LysR family transcriptional regulator
RA	2,941,374	T→A	6.8%	L188Q (CTG→CAG)	PP_2574 →	LysR family transcriptional regulator
RA	2,941,378	C→A	7.7%	R189R (CGC→CGA)	PP_2574 →	LysR family transcriptional regulator
RA	2,941,385	T→G	9.5%	C192G (TGC→GGC)	PP_2574 →	LysR family transcriptional regulator
RA	2,951,377	G→C	14.5%	intergenic (‑113/+48)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,384	A→C	15.0%	intergenic (‑120/+41)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,385	G→T	15.0%	intergenic (‑121/+40)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,392	G→C	15.3%	intergenic (‑128/+33)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,958,833	T→C	15.3%	intergenic (+56/+86)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,842	G→C	16.5%	intergenic (+65/+77)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,843	T→C	16.4%	intergenic (+66/+76)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,846	G→C	15.6%	intergenic (+69/+73)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,849	G→A	15.3%	intergenic (+72/+70)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,850	G→C	15.7%	intergenic (+73/+69)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,859	G→A	14.1%	intergenic (+82/+60)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,973,302	Δ1 bp	7.2%	coding (615/1713 nt)	PP_2600 ←	hypothetical protein
RA	2,973,308:1	+T	7.3%	coding (609/1713 nt)	PP_2600 ←	hypothetical protein
RA	2,992,336	G→C	5.1%	A260A (GCC→GCG)	PP_2616 ←	hypothetical protein
RA	2,992,339	G→C	5.1%	I259M (ATC→ATG)	PP_2616 ←	hypothetical protein
RA	3,006,511	T→G	9.4%	F1017V (TTC→GTC)	PP_2627 →	membrane protein
RA	3,006,516	G→T	9.3%	L1018L (CTG→CTT)	PP_2627 →	membrane protein
RA	3,006,517	A→C	9.5%	K1019Q (AAG→CAG)	PP_2627 →	membrane protein
RA	3,006,522	C→A	9.8%	D1020E (GAC→GAA)	PP_2627 →	membrane protein
RA	3,008,361	C→T	5.0%	S259S (TCG→TCA)	PP_2628 ←	ABC transporter ATP‑binding protein
RA	3,011,012	A→C	5.0%	V10V (GTA→GTC)	bcsG →	endoglucanase
RA	3,011,014	T→A	5.1%	L11Q (CTG→CAG)	bcsG →	endoglucanase
RA	3,011,022	T→G	6.4%	W14G (TGG→GGG)	bcsG →	endoglucanase
RA	3,011,027	T→A	5.3%	P15P (CCT→CCA)	bcsG →	endoglucanase
RA	3,011,029	G→T	5.3%	G16V (GGA→GTA)	bcsG →	endoglucanase
RA	3,011,032	T→C	6.2%	L17P (CTG→CCG)	bcsG →	endoglucanase
RA	3,048,647	G→T	11.1%	intergenic (+59/‑237)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,648	A→C	11.4%	intergenic (+60/‑236)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,662	C→T	7.8%	intergenic (+74/‑222)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,053,261	G→A	9.5%	intergenic (+19/+27)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,053,263	T→C	9.4%	intergenic (+21/+25)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,053,264	G→A	9.4%	intergenic (+22/+24)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,053,266	T→C	9.5%	intergenic (+24/+22)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,057,001:1	+A	10.4%	coding (390/990 nt)	PP_2669 ←	outer membrane protein
RA	3,057,006	Δ1 bp	9.8%	coding (385/990 nt)	PP_2669 ←	outer membrane protein
RA	3,065,574	C→G	5.1%	P157P (CCC→CCG)	PP_2677 →	hypothetical protein
RA	3,077,153	A→C	6.2%	I248S (ATC→AGC)	PP_2687 ←	hypothetical protein
RA	3,079,678	C→T	9.7%	intergenic (‑370/+64)	PP_2688 ← / ← PP_2689	hypothetical protein/endoribonuclease
RA	3,079,684	G→C	10.8%	intergenic (‑376/+58)	PP_2688 ← / ← PP_2689	hypothetical protein/endoribonuclease
RA	3,079,687	G→C	9.2%	intergenic (‑379/+55)	PP_2688 ← / ← PP_2689	hypothetical protein/endoribonuclease
RA	3,079,693	A→G	8.8%	intergenic (‑385/+49)	PP_2688 ← / ← PP_2689	hypothetical protein/endoribonuclease
RA	3,089,094:1	+T	6.0%	coding (102/510 nt)	PP_2697 ←	flavin reductase domain‑containing oxidoreductase
RA	3,100,605:1	+C	5.5%	coding (1341/1470 nt)	PP_2709 →	long‑chain fatty acid‑‑CoA ligase
RA	3,100,612	Δ1 bp	5.3%	coding (1348/1470 nt)	PP_2709 →	long‑chain fatty acid‑‑CoA ligase
RA	3,130,281	C→G	7.4%	L19V (CTG→GTG) ‡	PP_2747 →	hypothetical protein
RA	3,130,283	G→C	7.8%	L19L (CTG→CTC) ‡	PP_2747 →	hypothetical protein
RA	3,130,285	C→G	7.8%	T20R (ACG→AGG)	PP_2747 →	hypothetical protein
RA	3,146,654	T→C	7.0%	intergenic (+47/+19)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,146,657	G→A	7.0%	intergenic (+50/+16)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,158,350	C→G	8.6%	P109R (CCT→CGT)	opuA →	glycine betaine ABC transporter ATP‑binding protein/permease
RA	3,158,353	C→G	8.5%	T110R (ACG→AGG)	opuA →	glycine betaine ABC transporter ATP‑binding protein/permease
RA	3,166,396	C→T	5.3%	A262V (GCC→GTC)	PP_2780 →	3‑oxoacyl‑ACP synthase
RA	3,198,945	A→T	5.1%	intergenic (‑246/+31)	ethA ← / ← PP_2806	FAD‑containing monooxygenase EthA/TetR family transcriptional regulator
RA	3,212,319	T→C	5.1%	*189W (TGA→TGG) ‡	PP_2816 ←	transcriptional regulator NfxB
RA	3,212,321	A→T	5.1%	*189R (TGA→AGA) ‡	PP_2816 ←	transcriptional regulator NfxB
RA	3,212,324	A→T	5.3%	Y188N (TAT→AAT)	PP_2816 ←	transcriptional regulator NfxB
RA	3,227,829	C→A	5.4%	R209R (CGG→AGG)	PP_2828 →	hypothetical protein
RA	3,227,837	C→G	7.4%	S211R (AGC→AGG)	PP_2828 →	hypothetical protein
RA	3,228,340	A→G	5.7%	H379R (CAC→CGC) ‡	PP_2828 →	hypothetical protein
RA	3,228,341	C→T	5.3%	H379H (CAC→CAT) ‡	PP_2828 →	hypothetical protein
RA	3,235,258	A→T	6.7%	S104C (AGC→TGC)	PP_2834 →	D‑galactarate dehydratase/altronate dehydratase
RA	3,235,264	C→G	6.4%	P106A (CCA→GCA)	PP_2834 →	D‑galactarate dehydratase/altronate dehydratase
RA	3,252,535	G→A	7.3%	intergenic (+22/+221)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,252,540	T→C	8.0%	intergenic (+27/+216)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,287,319	T→C	16.7%	intergenic (+17/+24)	PP_2889 → / ← xthA	transmembrane regulator PrtR/exodeoxyribonuclease III/apurinic/apyrimidinic endodeoxyribonuclease VI
RA	3,287,320	G→A	16.7%	intergenic (+18/+23)	PP_2889 → / ← xthA	transmembrane regulator PrtR/exodeoxyribonuclease III/apurinic/apyrimidinic endodeoxyribonuclease VI
RA	3,294,391	G→A	5.1%	G1211E (GGG→GAG)	PP_2893 →	hypothetical protein
RA	3,312,731	T→A	6.8%	intergenic (+29/‑133)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,312,732	T→A	13.3%	intergenic (+30/‑132)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,312,733	A→C	6.8%	intergenic (+31/‑131)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,328,407	C→T	5.4%	intergenic (‑159/‑86)	udg ← / → PP_2927	UDP‑glucose 6‑dehydrogenase/hypothetical protein
RA	3,355,340	A→G	5.6%	L179L (TTG→CTG)	PP_2951 ←	TetR family transcriptional regulator
RA	3,359,986	A→C	6.1%	C442G (TGC→GGC)	PP_2956 ←	ribosomal protein S6 modification protein‑like protein
RA	3,380,579	A→G	11.3%	N70D (AAC→GAC)	tnpT‑I →	cointegrate resolution protein T
RA	3,380,583	T→A	11.1%	L71Q (CTG→CAG)	tnpT‑I →	cointegrate resolution protein T
RA	3,380,587	C→T	11.3%	V72V (GTC→GTT)	tnpT‑I →	cointegrate resolution protein T
RA	3,402,000	G→T	6.0%	intergenic (+46/‑151)	PP_3009 → / → PP_3010	hypothetical protein/hypothetical protein
RA	3,402,026	T→C	6.1%	intergenic (+72/‑125)	PP_3009 → / → PP_3010	hypothetical protein/hypothetical protein
RA	3,403,339	G→T	6.2%	R57R (CGA→AGA)	PP_3013 ←	hypothetical protein
RA	3,414,637	C→T	9.8%	A535V (GCC→GTC)	PP_3026 →	recombinase
RA	3,424,932:1	+G	6.5%	intergenic (+477/‑35)	PP_3039 → / → PP_3040	hypothetical protein/holin
RA	3,424,935	T→A	6.4%	intergenic (+480/‑32)	PP_3039 → / → PP_3040	hypothetical protein/holin
RA	3,424,938	Δ1 bp	6.4%	intergenic (+483/‑29)	PP_3039 → / → PP_3040	hypothetical protein/holin
RA	3,435,965	G→A	6.0%	Q278Q (CAG→CAA)	gpJ →	baseplate/tail fiber protein
RA	3,454,044	G→A	5.6%	T630T (ACC→ACT)	aacs ←	acetoacetyl‑CoA synthetase
RA	3,456,354	T→G	6.1%	E51A (GAG→GCG)	eco ←	ecotin
RA	3,457,102	T→G	5.6%	E77A (GAG→GCG)	hbdH ←	3‑hydroxybutyrate dehydrogenase
RA	3,507,789	T→G	11.6%	F32C (TTC→TGC) ‡	PP_3105 →	membrane protein
RA	3,507,790	C→A	11.6%	F32L (TTC→TTA) ‡	PP_3105 →	membrane protein
RA	3,507,798	T→C	12.3%	V35A (GTG→GCG)	PP_3105 →	membrane protein
RA	3,528,609	T→A	7.1%	L128Q (CTG→CAG)	dnaEB →	error‑prone DNA polymerase
RA	3,528,612	T→A	7.1%	L129Q (CTG→CAG)	dnaEB →	error‑prone DNA polymerase
RA	3,543,960	G→T	7.4%	S506R (AGC→AGA)	PP_3130 ←	hypothetical protein
RA	3,543,961	Δ1 bp	7.4%	coding (1517/2607 nt)	PP_3130 ←	hypothetical protein
RA	3,543,968	A→G	7.5%	L504L (TTG→CTG)	PP_3130 ←	hypothetical protein
RA	3,553,216	T→A	5.5%	L277Q (CTG→CAG)	PP_3137 →	group 2 family glycosyl transferase
RA	3,581,437	Δ1 bp	7.3%	coding (490/942 nt)	PP_3160 →	hypothetical protein
RA	3,581,441	G→A	7.3%	S165N (AGC→AAC)	PP_3160 →	hypothetical protein
RA	3,581,445	C→A	6.8%	F166L (TTC→TTA)	PP_3160 →	hypothetical protein
RA	3,602,918	G→C	5.0%	S94T (AGT→ACT)	garK →	glycerate kinase
RA	3,624,187	G→C	6.9%	intergenic (‑92/+81)	PP_3194 ← / ← PP_3195	hypothetical protein/hypothetical protein
RA	3,625,580	T→A	5.6%	intergenic (‑50/+27)	PP_3195 ← / ← PP_3196	hypothetical protein/nodulation protein d1
RA	3,659,949	C→G	7.0%	intergenic (‑41/+34)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,659,952	T→C	6.1%	intergenic (‑44/+31)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,659,954	C→G	6.4%	intergenic (‑46/+29)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,685,381	G→A	7.8%	intergenic (+20/‑39)	PP_5593 → / → PP_5594	hypothetical protein/hypothetical protein
RA	3,685,384	G→T	7.8%	intergenic (+23/‑36)	PP_5593 → / → PP_5594	hypothetical protein/hypothetical protein
RA	3,685,387	A→C	8.0%	intergenic (+26/‑33)	PP_5593 → / → PP_5594	hypothetical protein/hypothetical protein
RA	3,685,390	T→C	8.4%	intergenic (+29/‑30)	PP_5593 → / → PP_5594	hypothetical protein/hypothetical protein
RA	3,753,638	G→T	9.9%	A96A (GCC→GCA)	PP_3316 ←	chaperone‑associated ATPase
RA	3,753,641	A→C	9.9%	V95V (GTT→GTG)	PP_3316 ←	chaperone‑associated ATPase
RA	3,762,985	A→T	11.2%	N62I (AAC→ATC)	PP_3326 →	hypothetical protein
RA	3,762,990	A→T	8.6%	I64F (ATC→TTC)	PP_3326 →	hypothetical protein
RA	3,763,545	A→G	5.4%	intergenic (+22/+1653)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,549	C→T	5.3%	intergenic (+26/+1649)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,788,441	G→C	7.1%	Y79* (TAC→TAG)	PP_3350 ←	hypothetical protein
RA	3,788,444	G→C	7.1%	R78R (CGC→CGG)	PP_3350 ←	hypothetical protein
RA	3,791,448	C→G	5.2%	G283G (GGC→GGG)	PP_3353 →	sulfatase‑modifying protein
RA	3,791,453	C→G	5.4%	A285G (GCC→GGC)	PP_3353 →	sulfatase‑modifying protein
RA	3,793,935	A→T	6.5%	L211M (TTG→ATG)	PP_3355 ←	beta‑ketothiolase
RA	3,793,940	A→T	6.5%	I209N (ATT→AAT)	PP_3355 ←	beta‑ketothiolase
RA	3,797,890	A→T	7.6%	A49A (GCT→GCA)	vdh ←	vanillin dehydrogenase
RA	3,797,893	A→T	7.6%	A48A (GCT→GCA)	vdh ←	vanillin dehydrogenase
RA	3,797,898	C→G	7.1%	V47L (GTG→CTG)	vdh ←	vanillin dehydrogenase
RA	3,829,573	T→G	5.3%	Q20P (CAG→CCG)	PP_3382 ←	gluconate 2‑dehydrogenase cytochrome c subunit
RA	3,853,162	T→A	11.8%	I169N (ATT→AAT)	alkB →	alpha‑ketoglutarate‑ and Fe(II)‑dependent dioxygenase
RA	3,866,051:1	+A	48.4%	coding (871/1020 nt)	PP_3415 ←	LacI family transcriptional regulator
RA	3,866,854	A→C	53.7%	V23G (GTT→GGT)	PP_3415 ←	LacI family transcriptional regulator
RA	3,932,965	G→A	6.5%	R186W (CGG→TGG)	PP_3466 ←	ABC transporter permease/ATP‑binding protein
RA	3,935,321	G→T	5.6%	L46M (CTG→ATG)	PP_3467 ←	sigma‑54 dependent transcriptional regulator
RA	3,960,657	T→C	5.6%	intergenic (‑229/‑100)	mnxG ← / → PP_3491	manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein
RA	3,960,659	T→A	5.3%	intergenic (‑231/‑98)	mnxG ← / → PP_3491	manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein
RA	3,962,539	G→T	6.9%	K231N (AAG→AAT)	PP_3492 →	acyl‑CoA dehydrogenase
RA	3,962,544	T→A	6.5%	L233Q (CTG→CAG)	PP_3492 →	acyl‑CoA dehydrogenase
RA	3,968,923	C→T	22.2%	S336F (TCC→TTC)	PP_3498 →	transposase
RA	3,968,928	C→T	16.2%	Q338* (CAG→TAG)	PP_3498 →	transposase
RA	3,968,935	A→C	14.3%	D340A (GAT→GCT)	PP_3498 →	transposase
RA	3,968,935:1	+C	14.3%	coding (1019/1179 nt)	PP_3498 →	transposase
RA	3,984,262	A→T	5.1%	L140Q (CTG→CAG)	PP_3512 ←	membrane protein
RA	4,022,827	G→C	7.8%	intergenic (‑478/+190)	PP_3547 ← / ← emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
RA	4,022,832	C→A	7.9%	intergenic (‑483/+185)	PP_3547 ← / ← emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
RA	4,045,978	C→A	5.8%	Q262H (CAG→CAT) ‡	PP_3567 ←	LysR family transcriptional regulator
RA	4,045,979	T→G	5.6%	Q262P (CAG→CCG) ‡	PP_3567 ←	LysR family transcriptional regulator
RA	4,049,951	A→G	12.2%	intergenic (+40/‑61)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,954	C→G	12.0%	intergenic (+43/‑58)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,957	C→T	12.0%	intergenic (+46/‑55)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,082,935	C→T	6.1%	P279L (CCG→CTG)	PP_3592 →	RpiR family transcriptional regulator
RA	4,094,380	G→T	6.4%	G445W (GGG→TGG)	PP_3602 →	2,5‑dioxovalerate dehydrogenase
RA	4,124,287	G→A	5.6%	A240T (GCC→ACC)	PP_3628 →	choline/carnitine/betaine transporter family protein
RA	4,141,475	G→A	5.3%	V132M (GTG→ATG)	PP_3645 →	L‑proline amide hydrolase
RA	4,143,926	T→A	8.4%	intergenic (+35/‑88)	PP_3647 → / → PP_3648	oxidoreductase/carboxymuconolactone decarboxylase family protein
RA	4,143,927	T→A	7.8%	intergenic (+36/‑87)	PP_3647 → / → PP_3648	oxidoreductase/carboxymuconolactone decarboxylase family protein
RA	4,150,067	C→T	6.7%	intergenic (+22/‑375)	PP_3654 → / → PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
RA	4,156,907	C→A	6.8%	intergenic (‑73/+128)	PP_3659 ← / ← PP_3660	transcriptional regulator, AraC family/LysR family transcriptional regulator
RA	4,162,143	T→C	8.3%	intergenic (‑43/+34)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,147	T→A	6.9%	intergenic (‑47/+30)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,148	T→A	6.8%	intergenic (‑48/+29)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,152	G→A	7.1%	intergenic (‑52/+25)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,196,328	C→A	7.7%	intergenic (+126/+243)	PP_5618 → / ← PP_5619	Cro/CI family transcriptional regulator/hypothetical protein
RA	4,196,336	G→A	8.6%	intergenic (+134/+235)	PP_5618 → / ← PP_5619	Cro/CI family transcriptional regulator/hypothetical protein
RA	4,196,337	G→C	8.9%	intergenic (+135/+234)	PP_5618 → / ← PP_5619	Cro/CI family transcriptional regulator/hypothetical protein
RA	4,196,338	T→C	8.2%	intergenic (+136/+233)	PP_5618 → / ← PP_5619	Cro/CI family transcriptional regulator/hypothetical protein
RA	4,196,346	T→G	6.9%	intergenic (+144/+225)	PP_5618 → / ← PP_5619	Cro/CI family transcriptional regulator/hypothetical protein
RA	4,203,911	G→T	5.3%	A1303A (GCC→GCA)	PP_3691 ←	DNA helicase‑related protein
RA	4,203,914	A→C	5.3%	T1302T (ACT→ACG)	PP_3691 ←	DNA helicase‑related protein
RA	4,210,488	C→T	9.1%	S799S (AGC→AGT)	PP_3692 →	hypothetical protein
RA	4,240,286	T→G	7.2%	R16S (AGA→AGC)	PP_3717 ←	LuxR family transcriptional regulator
RA	4,240,291	C→A	6.6%	A15S (GCT→TCT)	PP_3717 ←	LuxR family transcriptional regulator
RA	4,240,297	A→G	5.3%	W13R (TGG→CGG)	PP_3717 ←	LuxR family transcriptional regulator
RA	4,248,947	C→G	5.6%	G375A (GGC→GCC) ‡	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,948	C→G	5.6%	G375R (GGC→CGC) ‡	PP_3724 ←	acyl‑CoA synthetase
RA	4,264,956	T→A	10.7%	L42Q (CTG→CAG)	vanB →	vanillate O‑demethylase oxidoreductase
RA	4,264,962	A→T	10.4%	D44V (GAC→GTC)	vanB →	vanillate O‑demethylase oxidoreductase
RA	4,264,968	T→A	8.7%	L46Q (CTG→CAG)	vanB →	vanillate O‑demethylase oxidoreductase
RA	4,274,462	A→C	5.7%	Q125H (CAA→CAC)	glcD →	glycolate oxidase FAD‑linked subunit
RA	4,281,399	A→C	8.1%	S23R (AGT→AGG)	PP_3751 ←	cyanate transporter
RA	4,281,403	G→A	5.5%	T22I (ACC→ATC) ‡	PP_3751 ←	cyanate transporter
RA	4,281,404	T→C	6.9%	T22A (ACC→GCC) ‡	PP_3751 ←	cyanate transporter
RA	4,281,408	G→T	5.9%	I20I (ATC→ATA)	PP_3751 ←	cyanate transporter
RA	4,293,264	G→A	5.8%	intergenic (+36/+34)	PP_3762 → / ← PP_3763	two‑component system response regulator/precorrin‑6A synthase
RA	4,293,265	T→C	5.8%	intergenic (+37/+33)	PP_3762 → / ← PP_3763	two‑component system response regulator/precorrin‑6A synthase
RA	4,294,001	T→C	5.3%	Q16R (CAG→CGG)	PP_3763 ←	precorrin‑6A synthase
RA	4,301,619	G→C	11.6%	intergenic (+65/‑1235)	PP_3774 → / → PP_5627	hypothetical protein/hypothetical protein
RA	4,301,621	G→C	12.9%	intergenic (+67/‑1233)	PP_3774 → / → PP_5627	hypothetical protein/hypothetical protein
RA	4,301,623	G→C	7.7%	intergenic (+69/‑1231)	PP_3774 → / → PP_5627	hypothetical protein/hypothetical protein
RA	4,318,924	G→A	5.7%	A381T (GCC→ACC)	PP_3789 →	efflux transporter
RA	4,329,005	G→C	5.9%	G70A (GGC→GCC)	PP_3799 →	hypothetical protein
RA	4,331,674	A→G	7.4%	T110T (ACA→ACG)	PP_3803 →	cation ABC transporter permease
RA	4,331,722	G→A	9.6%	L126L (CTG→CTA)	PP_3803 →	cation ABC transporter permease
RA	4,338,437	T→A	12.1%	intergenic (+13/+129)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,447	T→C	14.2%	intergenic (+23/+119)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,448	G→A	14.4%	intergenic (+24/+118)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,537	A→T	18.9%	intergenic (+113/+29)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,538	A→T	18.0%	intergenic (+114/+28)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,348,749	A→G	48.8%	intergenic (‑70/+404)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,353,340	C→G	7.2%	P141R (CCG→CGG)	yrpB →	2‑nitropropane dioxygenase
RA	4,355,090	Δ1 bp	7.5%	coding (246/681 nt)	modB →	molybdate ABC transporter permease ModB
RA	4,355,094:1	+C	7.8%	coding (250/681 nt)	modB →	molybdate ABC transporter permease ModB
RA	4,395,791	A→C	5.3%	H9Q (CAT→CAG)	PP_3871 ←	hypothetical protein
RA	4,425,183	G→C	6.7%	intergenic (‑197/‑603)	PP_5647 ← / → PP_3917	hypothetical protein/hypothetical protein
RA	4,425,185	G→C	6.8%	intergenic (‑199/‑601)	PP_5647 ← / → PP_3917	hypothetical protein/hypothetical protein
RA	4,425,187	G→C	7.4%	intergenic (‑201/‑599)	PP_5647 ← / → PP_3917	hypothetical protein/hypothetical protein
RA	4,442,672	C→G	5.4%	intergenic (‑98/+40)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,442,673	C→G	5.4%	intergenic (‑99/+39)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,445,294	C→G	6.8%	G117A (GGG→GCG) ‡	nicE ←	maleate isomerase
RA	4,445,295	C→G	6.6%	G117R (GGG→CGG) ‡	nicE ←	maleate isomerase
RA	4,479,857	A→G	5.1%	P388P (CCA→CCG)	ybdR →	Zn‑dependent oxidoreductase
RA	4,484,204	T→G	7.2%	V164G (GTT→GGT)	PP_3976 →	isochorismatase family hydrolase
RA	4,484,207	C→A	5.8%	T165N (ACC→AAC)	PP_3976 →	isochorismatase family hydrolase
RA	4,501,341	A→T	5.5%	intergenic (‑236/+19)	PP_3989 ← / ← PP_t60	DNA‑cytosine methyltransferase/tRNA‑Ser
RA	4,501,344	A→T	5.6%	intergenic (‑239/+16)	PP_3989 ← / ← PP_t60	DNA‑cytosine methyltransferase/tRNA‑Ser
RA	4,503,833	C→T	12.8%	intergenic (+38/‑60)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,503,834	A→G	12.7%	intergenic (+39/‑59)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,512,509	T→G	6.4%	N8T (AAC→ACC)	lolA ←	outer membrane lipoprotein carrier protein
RA	4,520,390	G→A	5.3%	A68A (GCG→GCA)	cspD →	DNA replication inhibitor
RA	4,520,393	C→G	5.2%	A69A (GCC→GCG)	cspD →	DNA replication inhibitor
RA	4,522,283	T→G	5.3%	F30V (TTC→GTC) ‡	idh →	isocitrate dehydrogenase
RA	4,522,285	C→G	5.3%	F30L (TTC→TTG) ‡	idh →	isocitrate dehydrogenase
RA	4,528,397	T→A	9.2%	intergenic (+28/‑48)	purB → / → PP_4017	adenylosuccinate lyase/hypothetical protein
RA	4,530,069	T→A	8.1%	intergenic (+31/‑137)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,530,070	T→A	8.1%	intergenic (+32/‑136)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,541,821:1	+G	5.4%	coding (494/1503 nt)	nhaB →	Na(+)/H(+) antiporter NhaB
RA	4,541,825	Δ1 bp	5.7%	coding (498/1503 nt)	nhaB →	Na(+)/H(+) antiporter NhaB
RA	4,560,899	T→A	8.0%	I232F (ATC→TTC)	PP_4048 ←	hypothetical protein
RA	4,560,900	T→A	7.9%	E231D (GAA→GAT)	PP_4048 ←	hypothetical protein
RA	4,564,684	T→C	6.8%	intergenic (‑780/‑118)	vgrG‑III ← / → glgA	type VI secretion system protein/glycogen synthase
RA	4,574,271	Δ1 bp	6.2%	coding (899/2154 nt)	glgX →	glycogen debranching enzyme
RA	4,574,273:1	+C	6.2%	coding (901/2154 nt)	glgX →	glycogen debranching enzyme
RA	4,605,418	A→C	5.9%	Q263P (CAG→CCG)	PP_4077 →	hypothetical protein
RA	4,632,641	G→C	7.5%	noncoding (35/76 nt)	PP_t59 ←	tRNA‑Gly
RA	4,648,558	C→T	5.8%	P209P (CCG→CCA)	PP_4112 ←	sulfate transporter
RA	4,705,459	T→A	16.7%	intergenic (‑151/+26)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,460	T→A	16.8%	intergenic (‑152/+25)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,470	A→G	10.5%	intergenic (‑162/+15)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,711,863	C→G	6.2%	L17V (CTG→GTG) ‡	PP_4171 →	hypothetical protein
RA	4,711,864	T→A	6.2%	L17Q (CTG→CAG) ‡	PP_4171 →	hypothetical protein
RA	4,711,867	T→A	6.2%	L18H (CTC→CAC) ‡	PP_4171 →	hypothetical protein
RA	4,711,868	C→G	6.3%	L18L (CTC→CTG) ‡	PP_4171 →	hypothetical protein
RA	4,725,086	Δ1 bp	5.1%	intergenic (+25/+43)	PP_5661 → / ← PP_4183	putative lipoprotein/membrane protein
RA	4,725,088:1	+C	5.1%	intergenic (+27/+41)	PP_5661 → / ← PP_4183	putative lipoprotein/membrane protein
RA	4,730,025	A→G	7.1%	intergenic (‑75/+28)	PP_mr46 ← / ← lpdG	sucC regulatory region/dihydrolipoyl dehydrogenase
RA	4,732,541	G→C	6.2%	A89G (GCC→GGC)	sucB ←	2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit
RA	4,741,273:1	+C	65.0%	intergenic (+464/+288)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,274	A→C	32.3%	intergenic (+465/+287)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,275	A→G	67.5%	intergenic (+466/+286)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,276	C→G	17.4%	intergenic (+467/+285)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,277	C→T	83.0%	intergenic (+468/+284)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,279	C→T	14.8%	intergenic (+470/+282)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,280	C→T	85.0%	intergenic (+471/+281)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,283	C→G	100%	intergenic (+474/+278)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,285	2 bp→CT	100%	intergenic (+476/+275)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,298:1	+T	64.3%	intergenic (+489/+263)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,299	C→T	35.5%	intergenic (+490/+262)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,301	A→C	35.7%	intergenic (+492/+260)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,302	A→G	64.4%	intergenic (+493/+259)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,304	C→G	35.6%	intergenic (+495/+257)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,305	Δ1 bp	64.3%	intergenic (+496/+256)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,794,013	A→T	5.4%	intergenic (‑129/+27)	pvdI ← / ← PP_4222	non‑ribosomal peptide synthetase/protein SyrP
RA	4,794,014	A→T	5.4%	intergenic (‑130/+26)	pvdI ← / ← PP_4222	non‑ribosomal peptide synthetase/protein SyrP
RA	4,796,649	A→G	25.5%	intergenic (‑162/+56)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,657	C→T	28.7%	intergenic (‑170/+48)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,659	G→C	27.5%	intergenic (‑172/+46)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,662	G→C	26.1%	intergenic (‑175/+43)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,664	A→G	28.1%	intergenic (‑177/+41)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,672	C→T	27.4%	intergenic (‑185/+33)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,808,234	G→C	6.6%	intergenic (‑298/‑257)	PP_4234 ← / → dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
RA	4,808,237	G→C	6.4%	intergenic (‑301/‑254)	PP_4234 ← / → dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
RA	4,826,147	G→A	5.6%	A1696A (GCC→GCT)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,827,099	C→A	6.0%	S1379I (AGT→ATT) ‡	pvdL ←	non‑ribosomal peptide synthetase
RA	4,827,100	T→G	6.1%	S1379R (AGT→CGT) ‡	pvdL ←	non‑ribosomal peptide synthetase
RA	4,832,099	A→T	5.5%	intergenic (+29/+123)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,102	T→A	5.0%	intergenic (+32/+120)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,105	A→T	5.3%	intergenic (+35/+117)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,842,941	Δ1 bp	16.8%	intergenic (+40/‑257)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,842,949:1	+G	19.8%	intergenic (+48/‑249)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,844,258	C→A	5.8%	T354K (ACG→AAG)	PP_4259 →	iron‑sulfur cluster‑binding protein
RA	4,844,263	T→G	5.8%	F356V (TTC→GTC)	PP_4259 →	iron‑sulfur cluster‑binding protein
RA	4,849,778	A→G	6.2%	S345G (AGT→GGT)	hemN →	oxygen‑independent coproporphyrinogen III dehydrogenase
RA	4,861,172	A→G	5.1%	intergenic (‑78/+159)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,895,757	T→A	7.8%	L56Q (CTG→CAG)	PP_4304 →	VIC family cation transporter
RA	4,895,760	T→A	7.8%	L57Q (CTG→CAG)	PP_4304 →	VIC family cation transporter
RA	4,896,444	T→C	6.4%	intergenic (+32/‑176)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,896,455	Δ1 bp	6.7%	intergenic (+43/‑165)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,896,458	Δ1 bp	7.7%	intergenic (+46/‑162)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,896,460	Δ1 bp	7.7%	intergenic (+48/‑160)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,896,467	T→C	8.7%	intergenic (+55/‑153)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,896,470	G→A	8.3%	intergenic (+58/‑150)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
JC	4,896,476	+GCG	7.6%	intergenic (+64/‑144)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,896,479	C→T	7.3%	intergenic (+67/‑141)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,900,096	G→A	7.4%	intergenic (+12/‑486)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,110	A→G	17.1%	intergenic (+26/‑472)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,114	G→A	14.8%	intergenic (+30/‑468)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,115	T→C	14.6%	intergenic (+31/‑467)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,119	C→T	15.5%	intergenic (+35/‑463)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,343	A→C	5.6%	intergenic (+259/‑239)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,917,404	A→T	7.1%	F25I (TTC→ATC)	ccmA ←	cytochrome c biogenesis ABC transporter ATP‑binding protein CcmA
RA	4,917,405	A→T	6.1%	D24E (GAT→GAA)	ccmA ←	cytochrome c biogenesis ABC transporter ATP‑binding protein CcmA
RA	4,921,633	C→G	5.9%	A666G (GCC→GGC)	PP_4330 →	toxin‑like protein
RA	4,936,585	A→G	5.2%	L17P (CTC→CCC)	flhA ←	flagellar export pore protein
RA	4,937,770	C→A	10.0%	G343V (GGG→GTG)	ddlA ←	D‑alanine‑‑D‑alanine ligase A
RA	4,945,325	C→G	7.0%	intergenic (+640/+158)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,327	C→G	8.5%	intergenic (+642/+156)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,329	T→C	8.4%	intergenic (+644/+154)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,374	G→T	6.5%	intergenic (+689/+109)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,377	C→T	6.5%	intergenic (+692/+106)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,378	A→G	6.5%	intergenic (+693/+105)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,416	T→A	6.1%	intergenic (+731/+67)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,417	T→A	6.1%	intergenic (+732/+66)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,950,510	C→G	5.1%	G129A (GGG→GCG)	fliL ←	flagellar protein FliL
RA	4,962,231	Δ1 bp	6.7%	coding (252/1356 nt)	atoC ←	two‑component system DNA‑binding transcriptional activator AtoC
RA	4,962,236:1	+C	6.5%	coding (247/1356 nt)	atoC ←	two‑component system DNA‑binding transcriptional activator AtoC
RA	5,007,107	T→C	7.4%	I14T (ATC→ACC)	PP_5674 →	hypothetical protein
RA	5,039,700	G→T	5.8%	I284I (ATC→ATA) ‡	PP_4446 ←	group II intron‑encoding maturase
RA	5,039,701	A→C	5.8%	I284S (ATC→AGC) ‡	PP_4446 ←	group II intron‑encoding maturase
RA	5,077,270	G→A	6.1%	intergenic (+17/+91)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,077,282	G→T	7.8%	intergenic (+29/+79)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,077,285	A→C	7.6%	intergenic (+32/+76)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,079,174	T→A	7.7%	intergenic (‑371/+26)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,079,177	T→A	7.8%	intergenic (‑374/+23)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,081,371	C→T	6.1%	T72T (ACG→ACA)	lysC ←	aspartokinase
RA	5,096,512	A→G	5.9%	V101A (GTC→GCC) ‡	argT ←	lysine/arginine/ornithine ABC transporter substrate‑binding protein
RA	5,096,513	C→T	5.9%	V101I (GTC→ATC) ‡	argT ←	lysine/arginine/ornithine ABC transporter substrate‑binding protein
RA	5,107,295	G→A	6.7%	R289C (CGC→TGC)	ydiJ ←	putative oxidoreductase
RA	5,135,034	T→A	6.6%	intergenic (‑47/+18)	PP_4520 ← / ← PP_4521	hypothetical protein/aerotaxis receptor
RA	5,135,035	T→A	6.6%	intergenic (‑48/+17)	PP_4520 ← / ← PP_4521	hypothetical protein/aerotaxis receptor
RA	5,135,036	T→A	6.6%	intergenic (‑49/+16)	PP_4520 ← / ← PP_4521	hypothetical protein/aerotaxis receptor
RA	5,155,372	G→A	6.0%	A57V (GCG→GTG)	PP_5698 ←	hypothetical protein
RA	5,158,869	C→G	5.4%	T306S (ACT→AGT)	PP_4542 →	ABC transporter ATP‑binding protein/permease
RA	5,160,790	C→T	6.2%	E105K (GAG→AAG)	PP_4543 ←	hypothetical protein
RA	5,169,767	A→C	6.0%	D446A (GAC→GCC)	PP_4547 →	glutamine synthetase
RA	5,169,772	C→T	6.7%	R448C (CGC→TGC)	PP_4547 →	glutamine synthetase
RA	5,169,775	T→A	6.5%	W449R (TGG→AGG)	PP_4547 →	glutamine synthetase
RA	5,169,782	T→A	6.6%	L451Q (CTG→CAG)	PP_4547 →	glutamine synthetase
RA	5,169,785	A→G	6.7%	H452R (CAC→CGC)	PP_4547 →	glutamine synthetase
RA	5,172,353	T→C	6.9%	T219A (ACC→GCC)	fadD‑I ←	long‑chain‑fatty acid‑‑CoA ligase
RA	5,172,360	G→A	7.0%	G216G (GGC→GGT)	fadD‑I ←	long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,292	T→C	14.6%	intergenic (‑285/+47)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,295	G→C	14.9%	intergenic (‑288/+44)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,296	G→C	14.8%	intergenic (‑289/+43)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,299	G→A	13.9%	intergenic (‑292/+40)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,182,107	G→T	6.3%	intergenic (‑117/+37)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,192,822	T→A	7.4%	intergenic (+155/‑47)	PP_4572 → / → PP_4573	hypothetical protein/AAA family ATPase
RA	5,192,823	T→A	7.4%	intergenic (+156/‑46)	PP_4572 → / → PP_4573	hypothetical protein/AAA family ATPase
RA	5,194,935	T→G	8.6%	intergenic (+29/+24)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,194,936	C→A	8.8%	intergenic (+30/+23)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,194,952	A→G	6.0%	intergenic (+46/+7)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,203,029	C→A	5.0%	L430M (CTG→ATG)	PP_4583 →	putative Peptidase
RA	5,212,520	C→T	6.7%	intergenic (+36/+58)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,212,523	G→A	6.7%	intergenic (+39/+55)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,212,540	C→T	6.0%	intergenic (+56/+38)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,212,552	T→C	6.5%	intergenic (+68/+26)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,229,239	Δ1 bp	9.3%	intergenic (‑133/+43)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,243	C→G	10.0%	intergenic (‑137/+39)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,246	C→G	10.6%	intergenic (‑140/+36)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,249:1	+C	10.1%	intergenic (‑143/+33)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,261	T→C	8.1%	intergenic (‑155/+21)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,237,790	G→C	5.2%	D68H (GAC→CAC)	PP_4614 →	hypothetical protein
RA	5,239,932	G→A	6.9%	A144V (GCG→GTG)	ldh ←	leucine dehydrogenase
RA	5,239,937	T→C	7.9%	P142P (CCA→CCG)	ldh ←	leucine dehydrogenase
RA	5,242,090	T→C	5.1%	T379A (ACC→GCC)	hmgB ←	fumarylacetoacetase
RA	5,257,919	T→C	5.5%	intergenic (‑70/+74)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,257,976	G→A	6.8%	intergenic (‑127/+17)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,268,999	T→A	8.6%	intergenic (+19/+17)	PP_4643 → / ← radA	xanthine/uracil permease family protein/DNA repair enzyme
RA	5,269,000	T→A	8.6%	intergenic (+20/+16)	PP_4643 → / ← radA	xanthine/uracil permease family protein/DNA repair enzyme
RA	5,277,709	C→A	5.3%	L208M (CTG→ATG)	PP_4652 →	membrane protein
RA	5,300,336	C→T	6.0%	R1162Q (CGG→CAG)	recB ←	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
RA	5,307,453	C→T	12.1%	intergenic (‑154/+32)	recC ← / ← PP_5SG	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit/5S ribosomal RNA
RA	5,307,459	T→C	11.3%	intergenic (‑160/+26)	recC ← / ← PP_5SG	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit/5S ribosomal RNA
RA	5,307,460	G→A	11.3%	intergenic (‑161/+25)	recC ← / ← PP_5SG	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit/5S ribosomal RNA
RA	5,307,466	A→G	11.8%	intergenic (‑167/+19)	recC ← / ← PP_5SG	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit/5S ribosomal RNA
RA	5,313,324	C→G	9.2%	intergenic (‑595/+119)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,313,327	C→G	9.1%	intergenic (‑598/+116)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,319,795	A→G	6.9%	intergenic (‑374/+35)	ilvI ← / ← PP_4681	acetohydroxybutanoate synthase/acetolactate synthase/hypothetical protein
RA	5,319,803	C→T	6.5%	intergenic (‑382/+27)	ilvI ← / ← PP_4681	acetohydroxybutanoate synthase/acetolactate synthase/hypothetical protein
RA	5,329,444	T→A	8.0%	L10Q (CTG→CAG)	PP_4690 →	Rieske 2Fe‑2S family protein
RA	5,331,457	A→C	5.1%	V51G (GTC→GGC)	PP_4692 ←	aspartate/tyrosine/aromatic aminotransferase
RA	5,344,509:1	+C	7.2%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,509:2	+T	7.2%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,515	C→G	7.8%	intergenic (+42/‑136)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,519	C→T	8.2%	intergenic (+46/‑132)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,528	A→G	7.3%	intergenic (+55/‑123)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,532	C→G	7.7%	intergenic (+59/‑119)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,424,552:1	+T	5.1%	coding (103/915 nt)	PP_4764 →	histone deacetylase family protein
RA	5,426,143	G→C	5.7%	A211P (GCG→CCG)	PP_4765 →	hypothetical protein
RA	5,427,963	A→T	6.0%	L63Q (CTG→CAG)	rhlE‑I ←	ATP‑dependent RNA helicase
RA	5,430,440	A→G	5.1%	intergenic (‑74/+87)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,458,940:1	+A	22.2%	intergenic (+17/‑45)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,458,946	Δ1 bp	22.2%	intergenic (+23/‑39)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,468,121:1	+A	5.3%	coding (819/1047 nt)	mltB ←	membrane‑bound lytic murein transglycosylase B
RA	5,468,126	Δ1 bp	5.4%	coding (814/1047 nt)	mltB ←	membrane‑bound lytic murein transglycosylase B
RA	5,503,190	C→G	6.7%	A31G (GCC→GGC)	oprC →	copper receptor OprC
RA	5,503,197	T→G	5.1%	P33P (CCT→CCG)	oprC →	copper receptor OprC
RA	5,527,466	T→G	5.2%	Y311D (TAC→GAC)	PP_4860 →	mannose‑6‑phosphate isomerase
RA	5,529,408	C→G	12.8%	intergenic (‑574/+20)	ydfG ← / ← livF‑II	bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein
RA	5,535,315	G→A	6.6%	R95H (CGC→CAC)	pncB →	nicotinate phosphoribosyltransferase
RA	5,536,027	C→A	7.0%	A332A (GCC→GCA)	pncB →	nicotinate phosphoribosyltransferase
RA	5,536,028	C→G	7.0%	L333V (CTG→GTG) ‡	pncB →	nicotinate phosphoribosyltransferase
RA	5,536,029	T→G	6.9%	L333R (CTG→CGG) ‡	pncB →	nicotinate phosphoribosyltransferase
RA	5,539,906	A→C	5.0%	R376R (CGT→CGG)	PP_4872 ←	hypothetical protein
RA	5,545,683	T→C	14.3%	intergenic (‑775/+102)	rpsF ← / ← rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
RA	5,549,653	T→A	9.6%	intergenic (+18/‑154)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,549,654	T→A	9.8%	intergenic (+19/‑153)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,565,800	G→A	6.9%	H579H (CAC→CAT)	mutL ←	DNA mismatch repair protein MutL
RA	5,565,805	A→T	7.1%	C578S (TGC→AGC)	mutL ←	DNA mismatch repair protein MutL
RA	5,565,806	A→T	7.0%	A577A (GCT→GCA)	mutL ←	DNA mismatch repair protein MutL
RA	5,565,811	T→C	11.1%	M576V (ATG→GTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,566,464	T→A	6.1%	Q358L (CAG→CTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,566,467	T→A	6.8%	Q357L (CAG→CTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,573,517	C→T	5.4%	R184C (CGC→TGC)	rsgA →	ribosome biogenesis GTPase RsgA
RA	5,577,398	C→G	5.1%	L357V (CTG→GTG)	PP_4906 →	hypothetical protein
RA	5,592,486	C→G	8.1%	S127R (AGC→AGG)	PP_4920 →	lipoprotein
RA	5,592,489	C→G	7.6%	Y128* (TAC→TAG)	PP_4920 →	lipoprotein
RA	5,596,666	C→T	6.4%	A39V (GCA→GTA)	PP_4923 →	outer membrane efflux protein
RA	5,601,876	C→A	5.6%	D553Y (GAC→TAC)	PP_4924 ←	subtilase family serine protease
RA	5,606,687	G→A	7.3%	D501D (GAC→GAT)	cyaB ←	cyclolysin secretion/processing ATP‑binding protein CyaB
RA	5,610,088	C→A	84.5%	E160* (GAA→TAA)	PP_4929 ←	LysR family transcriptional regulator
RA	5,623,312	A→T	5.3%	H159Q (CAT→CAA)	PP_4941 ←	hypothetical protein
RA	5,634,508	T→G	11.1%	intergenic (+33/+350)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,634,509	C→A	10.8%	intergenic (+34/+349)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,643,298	T→C	5.3%	intergenic (+32/‑91)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,312	G→A	5.5%	intergenic (+46/‑77)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,313	C→T	5.3%	intergenic (+47/‑76)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,314	A→G	5.5%	intergenic (+48/‑75)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,318	A→C	5.5%	intergenic (+52/‑71)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,321	G→T	5.9%	intergenic (+55/‑68)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,325	C→T	5.9%	intergenic (+59/‑64)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,326	A→G	5.8%	intergenic (+60/‑63)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,327	T→C	5.7%	intergenic (+61/‑62)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,341	G→A	6.5%	intergenic (+75/‑48)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,352	C→T	5.3%	intergenic (+86/‑37)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,644,635:1	+G	5.9%	intergenic (+65/‑64)	yhiN → / → PP_4954	FAD/NAD(P)‑binding domain‑containing oxidoreductase/membrane protein
RA	5,644,639	T→A	5.9%	intergenic (+69/‑60)	yhiN → / → PP_4954	FAD/NAD(P)‑binding domain‑containing oxidoreductase/membrane protein
RA	5,644,643	Δ1 bp	5.9%	intergenic (+73/‑56)	yhiN → / → PP_4954	FAD/NAD(P)‑binding domain‑containing oxidoreductase/membrane protein
RA	5,650,841	G→C	6.6%	Q135E (CAG→GAG)	PP_4959 ←	diguanylate cyclase
RA	5,650,843	T→A	5.9%	D134V (GAC→GTC)	PP_4959 ←	diguanylate cyclase
RA	5,650,845	G→C	5.8%	L133L (CTC→CTG)	PP_4959 ←	diguanylate cyclase
RA	5,651,425	T→G	6.1%	intergenic (‑182/+31)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,651,428	C→A	6.1%	intergenic (‑185/+28)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,655,677:1	+A	18.8%	intergenic (‑81/+71)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,682	T→G	22.0%	intergenic (‑86/+66)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,687	C→A	21.6%	intergenic (‑91/+61)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,692	Δ1 bp	17.6%	intergenic (‑96/+56)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,660,233	G→T	13.3%	intergenic (+35/‑194)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,660,236	A→C	13.5%	intergenic (+38/‑191)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,667,309	G→T	6.2%	intergenic (+36/+35)	nhaP → / ← PP_4975	NhaP‑type Na+(K+)/H+ antiporter/acyl‑CoA thioesterase
RA	5,667,310	A→C	6.8%	intergenic (+37/+34)	nhaP → / ← PP_4975	NhaP‑type Na+(K+)/H+ antiporter/acyl‑CoA thioesterase
RA	5,697,369:1	+A	5.8%	intergenic (+23/‑54)	hslV → / → hslU	ATP‑dependent HslVU protease peptidase subunit/protease HslVU ATPase subunit
RA	5,697,374	Δ1 bp	6.0%	intergenic (+28/‑49)	hslV → / → hslU	ATP‑dependent HslVU protease peptidase subunit/protease HslVU ATPase subunit
RA	5,726,860:1	+G	6.4%	coding (162/2574 nt)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,726,865	Δ1 bp	6.0%	coding (157/2574 nt)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,740,513	G→A	10.8%	intergenic (+22/+49)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,523	T→G	16.5%	intergenic (+32/+39)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,526	A→T	17.0%	intergenic (+35/+36)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,527	A→T	15.7%	intergenic (+36/+35)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,530	C→A	14.9%	intergenic (+39/+32)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,540	T→C	13.5%	intergenic (+49/+22)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,746,541	G→C	8.2%	intergenic (+32/+67)	PP_5042 → / ← PP_5043	hypothetical protein/PhoPQ‑activated pathogenicity‑like protein
RA	5,746,544	G→C	9.2%	intergenic (+35/+64)	PP_5042 → / ← PP_5043	hypothetical protein/PhoPQ‑activated pathogenicity‑like protein
RA	5,752,784	T→C	7.9%	A232A (GCT→GCC)	glnA →	glutamine synthetase
RA	5,753,541	T→G	5.6%	intergenic (+46/‑320)	glnA → / → glnL	glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
RA	5,753,542	C→A	5.7%	intergenic (+47/‑319)	glnA → / → glnL	glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
RA	5,790,036	C→A	6.0%	G379G (GGC→GGA)	ynfM →	efflux transporter
RA	5,790,037	T→G	6.8%	S380A (TCC→GCC)	ynfM →	efflux transporter
RA	5,815,587	C→T	5.7%	intergenic (+15/+76)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,592	G→T	7.2%	intergenic (+20/+71)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,595	A→C	6.5%	intergenic (+23/+68)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,600	A→G	7.4%	intergenic (+28/+63)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,846,014	A→G	9.3%	intergenic (+30/+61)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,846,019	G→A	11.4%	intergenic (+35/+56)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,846,028	T→C	11.0%	intergenic (+44/+47)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,846,033	C→T	9.7%	intergenic (+49/+42)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,866,752	G→T	9.2%	intergenic (+19/+38)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,866,753	A→C	10.8%	intergenic (+20/+37)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,867,789:1	+C	5.3%	intergenic (‑28/+24)	thyA ← / ← lgt	thymidylate synthase/prolipoprotein diacylglyceryl transferase
RA	5,867,794	Δ1 bp	5.3%	intergenic (‑33/+19)	thyA ← / ← lgt	thymidylate synthase/prolipoprotein diacylglyceryl transferase
RA	5,873,632	T→G	5.1%	L94R (CTG→CGG)	PP_5147 →	haloacid dehalogenase‑like family hydrolase
RA	5,886,820	C→G	7.9%	W84C (TGG→TGC)	PP_5161 ←	lysophospholipase
RA	5,886,825	C→G	8.3%	A83P (GCA→CCA)	PP_5161 ←	lysophospholipase
RA	5,890,847	A→C	7.2%	intergenic (+79/+41)	PP_5164 → / ← plpB	penicillin amidase family protein/NLPA lipoprotein
RA	5,890,848	A→T	7.1%	intergenic (+80/+40)	PP_5164 → / ← plpB	penicillin amidase family protein/NLPA lipoprotein
RA	5,890,849	G→T	7.3%	intergenic (+81/+39)	PP_5164 → / ← plpB	penicillin amidase family protein/NLPA lipoprotein
RA	5,902,788	T→A	6.2%	K102M (AAG→ATG) ‡	PP_5175 ←	HlyD family secretion protein
RA	5,902,789	T→A	6.0%	K102* (AAG→TAG) ‡	PP_5175 ←	HlyD family secretion protein
RA	5,903,220	G→T	8.4%	intergenic (‑128/‑140)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,903,221	A→C	8.5%	intergenic (‑129/‑139)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,903,887	G→A	8.4%	intergenic (+87/+20)	PP_5176 → / ← spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
RA	5,907,962:1	+G	7.3%	coding (61/1095 nt)	spuE ←	spermidine/putrescine ABC transporter substrate‑binding protein
RA	5,907,968	Δ1 bp	7.7%	coding (55/1095 nt)	spuE ←	spermidine/putrescine ABC transporter substrate‑binding protein
RA	5,942,835	G→A	6.4%	P55P (CCG→CCA)	PP_5210 →	alcohol dehydrogenase
RA	5,950,047	G→A	5.2%	E236E (GAG→GAA)	ppx →	exopolyphosphatase
RA	5,961,681	C→G	7.0%	A174G (GCC→GGC)	lysA‑II →	diaminopimelate decarboxylase
RA	5,961,684	T→A	8.2%	I175N (ATT→AAT)	lysA‑II →	diaminopimelate decarboxylase
RA	5,961,687	C→G	5.8%	A176G (GCC→GGC)	lysA‑II →	diaminopimelate decarboxylase
RA	5,966,389	A→T	5.2%	intergenic (‑402/+28)	PP_5232 ← / ← amtB	hypothetical protein/ammonium transporter AmtB
RA	5,971,420	G→T	8.7%	intergenic (‑71/‑57)	PP_5236 ← / → PP_5237	hypothetical protein/hypothetical protein
RA	5,984,498	G→A	6.1%	intergenic (+38/+51)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,500	T→C	5.9%	intergenic (+40/+49)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,503	G→A	5.8%	intergenic (+43/+46)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,505	T→C	5.8%	intergenic (+45/+44)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,511	G→A	6.5%	intergenic (+51/+38)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,988,865	G→A	17.2%	intergenic (+103/‑443)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,875	T→C	19.0%	intergenic (+113/‑433)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,880	C→T	18.9%	intergenic (+118/‑428)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,881	G→T	18.7%	intergenic (+119/‑427)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,882	C→T	19.5%	intergenic (+120/‑426)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,885	A→G	18.5%	intergenic (+123/‑423)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,891	G→C	19.5%	intergenic (+129/‑417)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,893	C→G	20.6%	intergenic (+131/‑415)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,896	C→T	19.6%	intergenic (+134/‑412)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,900	C→G	21.3%	intergenic (+138/‑408)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,904	C→T	19.9%	intergenic (+142/‑404)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,906	C→T	20.0%	intergenic (+144/‑402)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,945	C→A	28.0%	intergenic (+183/‑363)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,950	C→T	29.6%	intergenic (+188/‑358)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,951	A→G	29.8%	intergenic (+189/‑357)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,961	T→C	31.2%	intergenic (+199/‑347)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,967	Δ1 bp	31.2%	intergenic (+205/‑341)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,997,245:1	+G	14.1%	intergenic (‑158/+42)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	5,997,250	Δ1 bp	14.3%	intergenic (‑163/+37)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	6,002,474	A→T	5.1%	intergenic (‑118/+28)	amaA ← / ← amaB	L‑pipecolate oxidase/L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,713	C→A	5.9%	L174I (CTT→ATT)	ydcJ →	metalloprotein
RA	6,009,196	Δ1 bp	6.5%	intergenic (+37/+45)	norM → / ← PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
RA	6,009,197:1	+G	8.0%	intergenic (+38/+44)	norM → / ← PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
RA	6,009,199	T→C	10.3%	intergenic (+40/+42)	norM → / ← PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
RA	6,009,200	T→C	11.1%	intergenic (+41/+41)	norM → / ← PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
RA	6,009,205	G→A	10.2%	intergenic (+46/+36)	norM → / ← PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
RA	6,009,206	G→A	11.1%	intergenic (+47/+35)	norM → / ← PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
RA	6,023,215	G→A	7.6%	intergenic (+74/+70)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,023,216	T→C	7.6%	intergenic (+75/+69)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,027,278	A→T	5.6%	F212Y (TTC→TAC) ‡	PP_5277 ←	MFS transporter
RA	6,027,279	A→T	5.8%	F212I (TTC→ATC) ‡	PP_5277 ←	MFS transporter
RA	6,040,850	T→A	6.4%	intergenic (+19/+15)	PP_5292 → / ← PP_5293	catabolite repression control protein/hypothetical protein
RA	6,081,044	T→A	6.4%	intergenic (+35/+27)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,081,045	T→A	6.4%	intergenic (+36/+26)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,088,847	G→C	5.7%	G338A (GGC→GCC)	aphA →	acetylpolyamine aminohydrolase
RA	6,101,776	G→A	5.6%	G291D (GGC→GAC)	uvrD →	DNA‑dependent ATPase I/helicase II
RA	6,104,109	T→A	7.7%	intergenic (+31/‑83)	PP_5353 → / → PP_5354	hypothetical protein/hypothetical protein
RA	6,104,110	T→A	7.7%	intergenic (+32/‑82)	PP_5353 → / → PP_5354	hypothetical protein/hypothetical protein
RA	6,129,216	A→C	5.8%	intergenic (+22/+45)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,129,229	A→T	5.4%	intergenic (+35/+32)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,140,036	G→T	9.5%	K395N (AAG→AAT)	cusB →	CzcB family copper RND transporter membrane fusion protein
RA	6,140,037	G→A	9.5%	G396S (GGT→AGT) ‡	cusB →	CzcB family copper RND transporter membrane fusion protein
RA	6,140,038	G→C	9.7%	G396A (GGT→GCT) ‡	cusB →	CzcB family copper RND transporter membrane fusion protein
RA	6,140,039	T→C	10.2%	G396G (GGT→GGC) ‡	cusB →	CzcB family copper RND transporter membrane fusion protein
RA	6,140,040	A→C	11.6%	I397L (ATT→CTT)	cusB →	CzcB family copper RND transporter membrane fusion protein
RA	6,158,420:1	+T	7.8%	intergenic (+86/‑21)	PP_5401 → / → PP_5739	hypothetical protein/hypothetical protein
RA	6,158,423	C→T	9.5%	intergenic (+89/‑18)	PP_5401 → / → PP_5739	hypothetical protein/hypothetical protein
RA	6,158,426	A→G	9.2%	intergenic (+92/‑15)	PP_5401 → / → PP_5739	hypothetical protein/hypothetical protein
RA	6,158,429	Δ1 bp	8.8%	intergenic (+95/‑12)	PP_5401 → / → PP_5739	hypothetical protein/hypothetical protein
RA	6,166,037	C→T	7.5%	G87G (GGG→GGA)	PP_5406 ←	transposase

Unassigned missing coverage evidence
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4808205	4808218	14	36 [0]	[0] 60	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2

Unassigned new junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 61917	79 (1.080)	4 (0.060)	4/238	NT	5.3%	coding (162/1269 nt)	PP_0053	sulfide:quinone oxidoreductase
	?	NC_002947	= 61932	68 (0.970)					coding (177/1269 nt)	PP_0053	sulfide:quinone oxidoreductase
*	?	NC_002947	= 66118	68 (0.930)	6 (0.090)	6/232	NT	8.4%	coding (1176/1653 nt)	betA‑I	choline dehydrogenase
	?	NC_002947	= 66126	67 (0.980)					coding (1184/1653 nt)	betA‑I	choline dehydrogenase
*	?	NC_002947	85001 =	94 (1.290)	5 (0.070)	5/238	NT	5.1%	coding (804/825 nt)	aroE	shikimate 5‑dehydrogenase
	?	NC_002947	85032 =	97 (1.390)					intergenic (+10/+120)	aroE/PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
*	?	NC_002947	85049 =	87 (1.190)	9 (0.140)	9/214	NT	11.3%	intergenic (+27/+103)	aroE/PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
	?	NC_002947	85122 =	66 (1.050)					intergenic (+100/+30)	aroE/PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
*	?	NC_002947	92327 =	66 (0.900)	4 (0.060)	4/234	NT	5.9%	coding (53/810 nt)	trpA	tryptophan synthase subunit alpha
	?	NC_002947	92356 =	66 (0.960)					coding (24/810 nt)	trpA	tryptophan synthase subunit alpha
*	?	NC_002947	= 97899	85 (1.160)	7 (0.100)	6/236	NT	7.9%	coding (122/414 nt)	PP_0091	putative lipoprotein
	?	NC_002947	= 97914	83 (1.200)					coding (107/414 nt)	PP_0091	putative lipoprotein
*	?	NC_002947	109559 =	80 (1.100)	4 (0.060)	4/232	NT	5.0%	coding (750/1128 nt)	PP_0103	cytochrome c oxidase subunit 2
	?	NC_002947	109591 =	77 (1.130)					coding (782/1128 nt)	PP_0103	cytochrome c oxidase subunit 2
*	?	NC_002947	114350 =	79 (1.080)	4 (0.060)	4/234	NT	5.5%	coding (308/582 nt)	PP_0108	hypothetical protein
	?	NC_002947	114402 =	62 (0.900)					coding (360/582 nt)	PP_0108	hypothetical protein
*	?	NC_002947	= 158799	92 (1.260)	7 (0.100)	7/234	NT	7.2%	coding (1590/1956 nt)	PP_0149	hypothetical protein
	?	NC_002947	= 158816	94 (1.370)					coding (1573/1956 nt)	PP_0149	hypothetical protein
*	?	NC_002947	174250 =	NA (NA)	7 (0.100)	7/242	NT	NA	noncoding (1048/2902 nt)	PP_23SA	23S ribosomal RNA
	?	NC_002947	174275 =	NA (NA)					noncoding (1073/2902 nt)	PP_23SA	23S ribosomal RNA
*	?	NC_002947	= 176399	NA (NA)	33 (0.470) +CGAAA	17/238	NT	35.3%	intergenic (+43/‑420)	PP_5SA/PP_16SB	5S ribosomal RNA/16S ribosomal RNA
	?	NC_002947	= 182013	63 (0.860)					intergenic (+2/+63)	PP_5SB/PP_0160	5S ribosomal RNA/ferrioxamine receptor
*	?	NC_002947	= 178558	NA (NA)	10 (0.140)	6/238	NT	77.7%	intergenic (+218/‑75)	PP_16SB/PP_23SB	16S ribosomal RNA/23S ribosomal RNA
	?	NC_002947	= 699793	3 (0.040)					intergenic (+183/‑61)	PP_t06/PP_23SD	tRNA‑Ala/23S ribosomal RNA
*	?	NC_002947	= 199771	72 (0.990)	6 (0.080)	5/240	NT	7.8%	coding (5277/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 199796	73 (1.030)					coding (5302/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	202953 =	NA (NA)	6 (0.090)	4/236	NT	9.4%	coding (8459/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	203622 =	61 (0.840)					coding (9128/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	235331 =	101 (1.380)	10 (0.160)	8/216	NT	10.8%	intergenic (+28/+97)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
	?	NC_002947	235390 =	77 (1.210)					intergenic (+87/+38)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
*	?	NC_002947	= 242510	73 (1.000)	4 (0.060)	4/240	NT	5.2%	coding (220/507 nt)	PP_0190	disulfide bond formation protein B
	?	NC_002947	= 242528	74 (1.050)					coding (238/507 nt)	PP_0190	disulfide bond formation protein B
*	?	NC_002947	= 242878	63 (0.860)	5 (0.070)	5/234	NT	7.2%	intergenic (+81/‑151)	PP_0190/algQ	disulfide bond formation protein B/transcriptional regulator AlgQ
	?	NC_002947	= 242890	70 (1.020)					intergenic (+93/‑139)	PP_0190/algQ	disulfide bond formation protein B/transcriptional regulator AlgQ
*	?	NC_002947	250495 =	70 (0.960)	3 (0.040)	3/236	NT	5.1%	coding (708/1347 nt)	nfeD	membrane bound peptidase NefD
	?	NC_002947	250540 =	46 (0.660)					coding (663/1347 nt)	nfeD	membrane bound peptidase NefD
*	?	NC_002947	= 264723	71 (0.970)	5 (0.070)	5/234	NT	6.9%	intergenic (+31/‑47)	gabD‑I/PP_mr03	succinate‑semialdehyde dehydrogenase/gabT regulatory region
	?	NC_002947	= 264742	69 (1.000)					intergenic (+50/‑28)	gabD‑I/PP_mr03	succinate‑semialdehyde dehydrogenase/gabT regulatory region
*	?	NC_002947	= 273638	59 (0.810)	4 (0.060)	4/240	NT	6.3%	coding (130/1110 nt)	metNB	methionine ABC transporter ATP‑binding protein
	?	NC_002947	= 273655	62 (0.880)					coding (113/1110 nt)	metNB	methionine ABC transporter ATP‑binding protein
*	?	NC_002947	= 312731	89 (1.220)	8 (0.120)	4/220	NT	9.0%	coding (483/831 nt)	fdhD	protein sulfur transferase
	?	NC_002947	= 312759	83 (1.280)					coding (455/831 nt)	fdhD	protein sulfur transferase
*	?	NC_002947	321952 =	84 (1.150)	4 (0.060)	4/234	NT	5.0%	intergenic (+237/+221)	aguA/PP_0267	agmatine deiminase/ferric siderophore receptor
	?	NC_002947	321978 =	72 (1.050)					intergenic (+263/+195)	aguA/PP_0267	agmatine deiminase/ferric siderophore receptor
*	?	NC_002947	332589 =	95 (1.300)	5 (0.070)	5/238	NT	5.3%	coding (100/213 nt)	PP_0273	hypothetical protein
	?	NC_002947	332612 =	89 (1.270)					coding (77/213 nt)	PP_0273	hypothetical protein
*	?	NC_002947	= 363546	54 (0.740)	5 (0.080)	5/214	NT	8.4%	intergenic (‑61/+106)	lcdH/PP_0303	L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme
	?	NC_002947	= 363605	62 (0.990)					intergenic (‑120/+47)	lcdH/PP_0303	L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme
*	?	NC_002947	= 414024	86 (1.180)	7 (0.120)	6/192	NT	9.4%	intergenic (+41/‑162)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
	?	NC_002947	= 414054	69 (1.220)					intergenic (+71/‑132)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
*	?	NC_002947	429963 =	79 (1.080)	5 (0.070)	5/234	NT	6.6%	coding (420/711 nt)	PP_0353	exonuclease
	?	NC_002947	429987 =	68 (0.990)					coding (396/711 nt)	PP_0353	exonuclease
*	?	NC_002947	450910 =	71 (0.970)	4 (0.060)	5/226	NT	6.1%	noncoding (104/127 nt)	PP_mr05	RsmY ncRNA
	?	NC_002947	450936 =	58 (0.870)					intergenic (+3/+16)	PP_mr05/PP_0371	RsmY ncRNA/LysR family transcriptional regulator
*	?	NC_002947	458986 =	85 (1.160)	5 (0.070)	5/238	NT	5.9%	coding (872/912 nt)	pqqB	coenzyme PQQ synthesis protein B
	?	NC_002947	459016 =	79 (1.130)					coding (842/912 nt)	pqqB	coenzyme PQQ synthesis protein B
*	?	NC_002947	478264 =	41 (0.560)	4 (0.070)	4/188	NT	9.2%	intergenic (+9/+101)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	478359 =	48 (0.870)					intergenic (+104/+6)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
*	?	NC_002947	= 478293	42 (0.580)	6 (0.110)	5/188	NT	13.1%	intergenic (+38/+72)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	= 478328	48 (0.870)					intergenic (+73/+37)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
*	?	NC_002947	482080 =	69 (0.950)	6 (0.080)	6/240	NT	8.6%	coding (284/1272 nt)	PP_0396	hypothetical protein
	?	NC_002947	482100 =	61 (0.860)					coding (264/1272 nt)	PP_0396	hypothetical protein
*	?	NC_002947	482447 =	75 (1.030)	4 (0.060)	4/226	NT	5.8%	intergenic (‑84/+72)	PP_0396/yeaG	hypothetical protein/protein kinase
	?	NC_002947	482497 =	62 (0.930)					intergenic (‑134/+22)	PP_0396/yeaG	hypothetical protein/protein kinase
*	?	NC_002947	529914 =	53 (0.730)	7 (0.110)	7/226	NT	11.5%	intergenic (+8/‑176)	PP_5SC/birA	5S ribosomal RNA/bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA
	?	NC_002947	529950 =	60 (0.900)					intergenic (+44/‑140)	PP_5SC/birA	5S ribosomal RNA/bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA
*	?	NC_002947	= 562730	45 (0.620)	5 (0.070)	5/232	NT	9.9%	coding (453/621 nt)	rpsD	30S ribosomal protein S4
	?	NC_002947	= 562763	49 (0.720)					coding (486/621 nt)	rpsD	30S ribosomal protein S4
*	?	NC_002947	611761 =	NA (NA)	6 (0.090)	6/236	NT	NA	coding (655/966 nt)	PP_0526	transposase
	?	NC_002947	611779 =	NA (NA)					coding (673/966 nt)	PP_0526	transposase
*	?	NC_002947	= 614300	66 (0.900)	9 (0.160)	9/186	NT	13.7%	intergenic (‑116/+62)	dxs/ispA	1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase
	?	NC_002947	= 614316	64 (1.170)					intergenic (‑132/+46)	dxs/ispA	1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase
*	?	NC_002947	619244 =	96 (1.320)	5 (0.070)	4/236	NT	5.1%	coding (757/1329 nt)	pfeS‑I	histidine kinase
	?	NC_002947	619271 =	96 (1.380)					coding (730/1329 nt)	pfeS‑I	histidine kinase
*	?	NC_002947	647234 =	61 (0.840)	4 (0.060)	4/232	NT	6.8%	coding (854/1854 nt)	acoR	acetoin catabolism regulatory protein
	?	NC_002947	647262 =	53 (0.780)					coding (882/1854 nt)	acoR	acetoin catabolism regulatory protein
*	?	NC_002947	= 652785	54 (0.740)	24 (0.390)	19/208	NT	51.5%	coding (1961/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	= 4808204	0 (0.000)					intergenic (‑268/‑287)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
*	?	NC_002947	669469 =	77 (1.050)	6 (0.090)	6/238	NT	7.5%	coding (908/2355 nt)	pbpC	peptidoglycan glycosyltransferase
	?	NC_002947	669496 =	75 (1.070)					coding (935/2355 nt)	pbpC	peptidoglycan glycosyltransferase
*	?	NC_002947	= 675399	95 (1.300)	7 (0.100)	5/242	NT	7.2%	coding (303/696 nt)	PP_0577	hypothetical protein
	?	NC_002947	= 675451	88 (1.240)					coding (251/696 nt)	PP_0577	hypothetical protein
*	?	NC_002947	= 725740	86 (1.180)	6 (0.080)	6/244	NT	6.0%	coding (162/1203 nt)	PP_0619	branched‑chain amino acid ABC transporter substrate‑binding protein
	?	NC_002947	= 725787	105 (1.460)					coding (115/1203 nt)	PP_0619	branched‑chain amino acid ABC transporter substrate‑binding protein
*	?	NC_002947	726899 =	80 (1.100)	5 (0.090)	5/198	NT	6.9%	intergenic (‑143/+124)	PP_0620/PP_0621	GntR family transcriptional regulator/hypothetical protein
	?	NC_002947	1436107 =	71 (1.220)					intergenic (‑137/+16)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
*	?	NC_002947	734282 =	60 (0.820)	4 (0.060)	4/236	NT	6.7%	coding (1038/1296 nt)	ndh	NADH dehydrogenase
	?	NC_002947	734340 =	54 (0.780)					coding (980/1296 nt)	ndh	NADH dehydrogenase
*	?	NC_002947	= 734332	57 (0.780)	4 (0.060)	4/226	NT	6.5%	coding (988/1296 nt)	ndh	NADH dehydrogenase
	?	NC_002947	= 734372	64 (0.960)					coding (948/1296 nt)	ndh	NADH dehydrogenase
*	?	NC_002947	741435 =	101 (1.380)	6 (0.090)	6/236	NT	5.9%	intergenic (+32/‑468)	PP_t12/PP_0635	tRNA‑Thr/group II intron‑encoding maturase
	?	NC_002947	741486 =	NA (NA)					intergenic (+83/‑417)	PP_t12/PP_0635	tRNA‑Thr/group II intron‑encoding maturase
*	?	NC_002947	= 741972	NA (NA)	3 (0.040)	3/240	NT	NA	coding (70/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	= 741999	NA (NA)					coding (97/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	742029 =	NA (NA)	4 (0.060)	3/240	NT	NA	coding (127/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	742052 =	NA (NA)					coding (150/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	810121 =	84 (1.150)	5 (0.070)	5/236	NT	5.8%	coding (685/876 nt)	PP_0696	hypothetical protein
	?	NC_002947	810160 =	83 (1.200)					coding (724/876 nt)	PP_0696	hypothetical protein
*	?	NC_002947	= 824444	64 (0.880)	6 (0.090)	4/236	NT	8.6%	coding (163/1431 nt)	PP_0708	betaine‑aldehyde dehydrogenase
	?	NC_002947	= 824472	66 (0.950)					coding (135/1431 nt)	PP_0708	betaine‑aldehyde dehydrogenase
*	?	NC_002947	851021 =	93 (1.270)	6 (0.080)	4/244	NT	6.5%	intergenic (‑601/‑204)	pcs/hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
	?	NC_002947	4022789 =	81 (1.130)					intergenic (‑440/+228)	PP_3547/emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
*	?	NC_002947	867923 =	76 (1.040)	12 (0.180)	11/222	NT	13.1%	intergenic (+18/+159)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
	?	NC_002947	868013 =	91 (1.390)					intergenic (+108/+69)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
*	?	NC_002947	883834 =	18 (0.250)	11 (0.200)	9/184	NT	41.3%	intergenic (+69/‑259)	PP_0766/PP_0767	hypothetical protein/LuxR family transcriptional regulator
	?	NC_002947	883908 =	18 (0.330)					intergenic (+143/‑185)	PP_0766/PP_0767	hypothetical protein/LuxR family transcriptional regulator
*	?	NC_002947	= 883865	17 (0.230)	17 (0.310)	12/184	NT	52.7%	intergenic (+100/‑228)	PP_0766/PP_0767	hypothetical protein/LuxR family transcriptional regulator
	?	NC_002947	= 883875	18 (0.330)					intergenic (+110/‑218)	PP_0766/PP_0767	hypothetical protein/LuxR family transcriptional regulator
*	?	NC_002947	902859 =	64 (0.880)	4 (0.060)	4/246	NT	6.0%	coding (643/849 nt)	nadC	quinolinate phosphoribosyltransferase
	?	NC_002947	902887 =	62 (0.860)					coding (615/849 nt)	nadC	quinolinate phosphoribosyltransferase
*	?	NC_002947	903021 =	90 (1.230)	9 (0.130)	9/232	NT	10.3%	coding (481/849 nt)	nadC	quinolinate phosphoribosyltransferase
	?	NC_002947	903046 =	72 (1.050)					coding (456/849 nt)	nadC	quinolinate phosphoribosyltransferase
*	?	NC_002947	911199 =	83 (1.140)	7 (0.100)	6/244	NT	8.5%	coding (1704/2853 nt)	fruB	PTS fructose transporter subunit EI/HPr/IIA
	?	NC_002947	911251 =	70 (0.970)					coding (1756/2853 nt)	fruB	PTS fructose transporter subunit EI/HPr/IIA
*	?	NC_002947	= 914215	89 (1.220)	5 (0.070)	5/236	NT	5.5%	coding (923/1743 nt)	fruA	PTS fructose transporter subunit IIBC
	?	NC_002947	= 914241	87 (1.250)					coding (949/1743 nt)	fruA	PTS fructose transporter subunit IIBC
*	?	NC_002947	917692 =	71 (0.970)	6 (0.090)	6/226	NT	8.9%	intergenic (‑123/+76)	PP_0798/opdC	GGDEF domain‑containing protein/histidine‑specific outer membrane porin D
	?	NC_002947	917754 =	58 (0.870)					intergenic (‑185/+14)	PP_0798/opdC	GGDEF domain‑containing protein/histidine‑specific outer membrane porin D
*	?	NC_002947	= 917702	68 (0.930)	4 (0.060)	4/226	NT	6.3%	intergenic (‑133/+66)	PP_0798/opdC	GGDEF domain‑containing protein/histidine‑specific outer membrane porin D
	?	NC_002947	= 917742	58 (0.870)					intergenic (‑173/+26)	PP_0798/opdC	GGDEF domain‑containing protein/histidine‑specific outer membrane porin D
*	?	NC_002947	= 997289	74 (1.010)	8 (0.120)	8/234	NT	9.4%	coding (310/2550 nt)	PP_0860	sulfite reductase flavoprotein subunit
	?	NC_002947	= 997337	85 (1.230)					coding (262/2550 nt)	PP_0860	sulfite reductase flavoprotein subunit
*	?	NC_002947	1001519 =	68 (0.930)	8 (0.110)	6/240	NT	10.4%	coding (493/771 nt)	PP_0863	hypothetical protein
	?	NC_002947	1001546 =	72 (1.020)					coding (520/771 nt)	PP_0863	hypothetical protein
*	?	NC_002947	1005213 =	56 (0.770)	3 (0.040)	3/228	NT	5.6%	coding (140/2430 nt)	PP_0867	FecA‑like outer membrane receptor
	?	NC_002947	1005265 =	50 (0.750)					coding (192/2430 nt)	PP_0867	FecA‑like outer membrane receptor
*	?	NC_002947	= 1012384	60 (0.820)	4 (0.060)	4/228	NT	6.2%	coding (793/1584 nt)	prfC	peptide chain release factor 3
	?	NC_002947	= 1012394	66 (0.980)					coding (803/1584 nt)	prfC	peptide chain release factor 3
*	?	NC_002947	1025270 =	74 (1.010)	6 (0.110)	4/194	NT	9.7%	intergenic (‑121/+108)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	1025363 =	54 (0.950)					intergenic (‑214/+15)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
*	?	NC_002947	= 1025296	68 (0.930)	8 (0.140)	8/194	NT	13.0%	intergenic (‑147/+82)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	= 1025335	54 (0.950)					intergenic (‑186/+43)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
*	?	NC_002947	1037774 =	70 (0.960)	7 (0.120)	7/202	NT	10.7%	intergenic (+16/+100)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
	?	NC_002947	1037852 =	60 (1.010)					intergenic (+94/+22)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
*	?	NC_002947	= 1064979	90 (1.230)	15 (0.220)	8/230	NT	14.7%	intergenic (+33/+80)	PP_0922/PP_0923	hypothetical protein/acyltransferase
	?	NC_002947	= 1065023	91 (1.340)					intergenic (+77/+36)	PP_0922/PP_0923	hypothetical protein/acyltransferase
*	?	NC_002947	1075093 =	65 (0.890)	3 (0.040)	3/244	NT	5.0%	coding (92/309 nt)	gatC	aspartyl/glutamyl‑tRNA(Asn/Gln) amidotransferase subunit C
	?	NC_002947	1075136 =	50 (0.700)					coding (49/309 nt)	gatC	aspartyl/glutamyl‑tRNA(Asn/Gln) amidotransferase subunit C
*	?	NC_002947	1099018 =	72 (0.990)	4 (0.060)	4/238	NT	5.9%	coding (553/975 nt)	kdsD	D‑arabinose 5‑phosphate isomerase
	?	NC_002947	1099050 =	59 (0.840)					coding (521/975 nt)	kdsD	D‑arabinose 5‑phosphate isomerase
*	?	NC_002947	1114875 =	82 (1.120)	11 (0.190)	9/198	NT	17.3%	intergenic (‑64/+115)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	1114951 =	40 (0.690)					intergenic (‑140/+39)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
*	?	NC_002947	1119929 =	69 (0.950)	4 (0.060)	4/236	NT	5.6%	coding (335/1494 nt)	pepA	cytosol aminopeptidase
	?	NC_002947	1119963 =	68 (0.980)					coding (301/1494 nt)	pepA	cytosol aminopeptidase
*	?	NC_002947	= 1149945	71 (0.970)	4 (0.060)	4/232	NT	5.4%	intergenic (‑186/+71)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	= 2354586	73 (1.070)					intergenic (‑12/+46)	PP_2068/PP_2069	multidrug MFS transporter membrane fusion protein/multidrug MFS transporter outer membrane protein
*	?	NC_002947	1149996 =	59 (0.810)	5 (0.080)	3/226	NT	7.9%	intergenic (‑237/+20)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	= 2071272	63 (0.950)					intergenic (+181/+46)	PP_1846/PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor
*	?	NC_002947	1164495 =	67 (0.920)	3 (0.040)	3/234	NT	5.1%	coding (796/855 nt)	yeaD	glucose‑6‑phosphate 1‑epimerase
	?	NC_002947	1164551 =	48 (0.700)					coding (852/855 nt) coding (860/864 nt)	yeaD hexR	glucose‑6‑phosphate 1‑epimerase DNA‑binding transcriptional regulator
*	?	NC_002947	= 1168587	71 (0.970)	5 (0.080)	5/212	NT	7.2%	intergenic (+98/+155)	eda/leuA	KHG/KDPG aldolase/2‑isopropylmalate synthase
	?	NC_002947	= 1168660	68 (1.090)					intergenic (+171/+82)	eda/leuA	KHG/KDPG aldolase/2‑isopropylmalate synthase
*	?	NC_002947	= 1172811	76 (1.040)	6 (0.090)	6/232	NT	7.5%	coding (248/1380 nt)	xseA	exodeoxyribonuclease 7 large subunit
	?	NC_002947	= 1172822	78 (1.140)					coding (237/1380 nt)	xseA	exodeoxyribonuclease 7 large subunit
*	?	NC_002947	= 1189910	55 (0.750)	4 (0.060)	4/236	NT	7.0%	coding (197/291 nt)	tatB‑I	Sec‑independent protein translocase TatB
	?	NC_002947	= 1189921	54 (0.780)					coding (186/291 nt)	tatB‑I	Sec‑independent protein translocase TatB
*	?	NC_002947	= 1221410	91 (1.250)	8 (0.110)	7/244	NT	8.4%	coding (1806/1908 nt)	PP_1067	sensor histidine kinase
	?	NC_002947	= 1221433	84 (1.170)					coding (1783/1908 nt)	PP_1067	sensor histidine kinase
*	?	NC_002947	= 1223246	55 (0.750)	6 (0.090)	7/220	NT	10.4%	intergenic (‑31/+35)	PP_1067/gltL	sensor histidine kinase/glutamate/aspartate ABC transporter ATP binding protein
	?	NC_002947	= 1223258	55 (0.850)					intergenic (‑43/+23)	PP_1067/gltL	sensor histidine kinase/glutamate/aspartate ABC transporter ATP binding protein
*	?	NC_002947	1273256 =	76 (1.040)	4 (0.060)	3/218	NT	6.0%	intergenic (+41/+127)	PP_1113/PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
	?	NC_002947	1273345 =	59 (0.920)					intergenic (+130/+38)	PP_1113/PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
*	?	NC_002947	= 1285024	75 (1.030)	4 (0.060)	4/246	NT	5.1%	coding (249/795 nt)	PP_1122	OmpA family protein
	?	NC_002947	= 1285063	75 (1.040)					coding (288/795 nt)	PP_1122	OmpA family protein
*	?	NC_002947	= 1296615	5 (0.070)	11 (0.250) +48 bp	10/152	NT	41.4%	intergenic (‑362/‑204)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
	?	NC_002947	5545674 =	46 (0.630)					intergenic (‑766/+111)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
*	?	NC_002947	= 1297145	NA (NA)	6 (0.090)	6/236	NT	NA	coding (327/1329 nt)	PP_1133	transposase
	?	NC_002947	= 1297150	NA (NA)					coding (332/1329 nt)	PP_1133	transposase
*	?	NC_002947	1298277 =	NA (NA)	10 (0.140)	5/238	NT	NA	intergenic (+130/+299)	PP_1133/PP_1134	transposase/hypothetical protein
	?	NC_002947	1298313 =	NA (NA)					intergenic (+166/+263)	PP_1133/PP_1134	transposase/hypothetical protein
*	?	NC_002947	1316880 =	72 (0.990)	5 (0.070)	5/242	NT	6.7%	coding (292/1989 nt)	PP_1150	membrane protein
	?	NC_002947	1316912 =	68 (0.950)					coding (324/1989 nt)	PP_1150	membrane protein
*	?	NC_002947	1326995 =	25 (0.340)	5 (0.070)	5/238	NT	15.4%	noncoding (1487/1522 nt)	PP_16SE	16S ribosomal RNA
	?	NC_002947	1327017 =	31 (0.440)					noncoding (1509/1522 nt)	PP_16SE	16S ribosomal RNA
*	?	NC_002947	1354379 =	71 (0.970)	4 (0.060)	4/232	NT	5.3%	coding (1004/2880 nt)	nrdA	ribonucleoside‑diphosphate reductase subunit alpha
	?	NC_002947	1354422 =	77 (1.130)					coding (961/2880 nt)	nrdA	ribonucleoside‑diphosphate reductase subunit alpha
*	?	NC_002947	1362765 =	64 (0.880)	5 (0.070)	4/244	NT	6.8%	coding (1149/1347 nt)	phoQ	sensor protein
	?	NC_002947	1362794 =	75 (1.040)					coding (1178/1347 nt)	phoQ	sensor protein
*	?	NC_002947	= 1362978	74 (1.010)	16 (0.240)	13/230	NT	17.4%	intergenic (+15/‑336)	phoQ/dctA‑I	sensor protein/C4‑dicarboxylate transport protein
	?	NC_002947	= 1363010	83 (1.230)					intergenic (+47/‑304)	phoQ/dctA‑I	sensor protein/C4‑dicarboxylate transport protein
*	?	NC_002947	= 1363276	71 (0.970)	7 (0.100)	7/234	NT	9.2%	intergenic (+313/‑38)	phoQ/dctA‑I	sensor protein/C4‑dicarboxylate transport protein
	?	NC_002947	= 1363280	72 (1.050)					intergenic (+317/‑34)	phoQ/dctA‑I	sensor protein/C4‑dicarboxylate transport protein
*	?	NC_002947	1377689 =	69 (0.950)	6 (0.080)	6/240	NT	8.3%	coding (2592/2643 nt)	PP_1202	phospholipids modification protein
	?	NC_002947	1377729 =	65 (0.920)					coding (2552/2643 nt)	PP_1202	phospholipids modification protein
*	?	NC_002947	1419553 =	53 (0.730)	4 (0.070)	4/184	NT	8.8%	intergenic (‑36/+101)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	1419647 =	44 (0.810)					intergenic (‑130/+7)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1419584	55 (0.750)	13 (0.240)	10/184	NT	23.5%	intergenic (‑67/+70)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	= 1419614	44 (0.810)					intergenic (‑97/+40)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	1425678 =	NA (NA)	8 (0.110)	5/244	NT	9.3%	intergenic (+73/‑432)	PP_1249/PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
	?	NC_002947	1429510 =	79 (1.080)					intergenic (+20/‑460)	mqo‑II/PP_1252	malate:quinone oxidoreductase/group II intron‑encoding maturase
*	?	NC_002947	= 1426821	NA (NA)	7 (0.100)	4/238	NT	NA	coding (712/1422 nt)	PP_1250	group II intron‑encoding maturase
	?	NC_002947	= 1426852	NA (NA)					coding (743/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	= 1433061	75 (1.030)	4 (0.070)	4/208	NT	5.9%	intergenic (+42/+82)	xenA/PP_1255	protein XenA/cis‑4‑hydroxy‑D‑proline oxidase
	?	NC_002947	= 1433113	64 (1.050)					intergenic (+94/+30)	xenA/PP_1255	protein XenA/cis‑4‑hydroxy‑D‑proline oxidase
*	?	NC_002947	= 1468301	64 (0.880)	4 (0.060)	3/236	NT	5.9%	coding (398/1479 nt)	algE	alginate production protein AlgE
	?	NC_002947	= 1468324	67 (0.960)					coding (375/1479 nt)	algE	alginate production protein AlgE
*	?	NC_002947	1479074 =	73 (1.000)	5 (0.080)	5/226	NT	7.0%	coding (131/471 nt)	moaC	cyclic pyranopterin monophosphate synthase accessory protein
	?	NC_002947	1479108 =	67 (1.010)					coding (165/471 nt)	moaC	cyclic pyranopterin monophosphate synthase accessory protein
*	?	NC_002947	1487013 =	57 (0.780)	7 (0.130)	7/188	NT	15.5%	intergenic (+22/+108)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	1487103 =	33 (0.600)					intergenic (+112/+18)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	= 1487042	55 (0.750)	11 (0.200)	11/188	NT	22.8%	intergenic (+51/+79)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	= 1487072	33 (0.600)					intergenic (+81/+49)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	1499443 =	74 (1.010)	13 (0.220)	6/202	NT	21.5%	intergenic (+13/‑153)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	1499526 =	35 (0.590)					intergenic (+96/‑70)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	1515735 =	70 (0.960)	4 (0.060)	4/228	NT	6.1%	coding (628/1749 nt)	ftsI	peptidoglycan DD transpeptidase
	?	NC_002947	1515764 =	58 (0.860)					coding (657/1749 nt)	ftsI	peptidoglycan DD transpeptidase
*	?	NC_002947	1521035 =	74 (1.010)	4 (0.060)	4/234	NT	5.9%	coding (250/1353 nt)	murD	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
	?	NC_002947	1521071 =	58 (0.840)					coding (286/1353 nt)	murD	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
*	?	NC_002947	= 1530106	68 (0.930)	8 (0.110)	8/248	NT	10.3%	coding (1087/1197 nt)	ftsZ	cell division protein FtsZ
	?	NC_002947	= 1530128	71 (0.970)					coding (1109/1197 nt)	ftsZ	cell division protein FtsZ
*	?	NC_002947	1531788 =	88 (1.210)	10 (0.170)	8/200	NT	13.0%	coding (130/630 nt)	PP_1344	hypothetical protein
	?	NC_002947	1531884 =	63 (1.070)					coding (34/630 nt)	PP_1344	hypothetical protein
*	?	NC_002947	1536266 =	113 (1.550)	6 (0.090)	6/238	NT	5.7%	intergenic (+15/‑141)	argJ/PP_1347	glutamate N‑acetyltransferase/amino acid acetyltransferase/glutathione S‑transferase family protein
	?	NC_002947	1536359 =	90 (1.290)					intergenic (+108/‑48)	argJ/PP_1347	glutamate N‑acetyltransferase/amino acid acetyltransferase/glutathione S‑transferase family protein
*	?	NC_002947	1569786 =	57 (0.780)	5 (0.070)	4/228	NT	8.2%	coding (555/1203 nt)	pcaF‑I	beta‑ketoadipyl‑CoA thiolase
	?	NC_002947	1569821 =	60 (0.890)					coding (590/1203 nt)	pcaF‑I	beta‑ketoadipyl‑CoA thiolase
*	?	NC_002947	= 1569795	55 (0.750)	5 (0.070)	5/228	NT	8.3%	coding (564/1203 nt)	pcaF‑I	beta‑ketoadipyl‑CoA thiolase
	?	NC_002947	= 1569810	60 (0.890)					coding (579/1203 nt)	pcaF‑I	beta‑ketoadipyl‑CoA thiolase
*	?	NC_002947	= 1570468	87 (1.190)	18 (0.310)	16/196	NT	19.4%	intergenic (+34/‑154)	pcaF‑I/pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
	?	NC_002947	= 1570494	81 (1.410)					intergenic (+60/‑128)	pcaF‑I/pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
*	?	NC_002947	1590942 =	47 (0.640)	4 (0.060)	4/240	NT	8.2%	intergenic (+51/+73)	PP_1394/PP_1395	acetolactate synthase large subunit/AraC family transcriptional regulator
	?	NC_002947	1590962 =	44 (0.620)					intergenic (+71/+53)	PP_1394/PP_1395	acetolactate synthase large subunit/AraC family transcriptional regulator
*	?	NC_002947	1602098 =	79 (1.080)	4 (0.060) +TGCACCGCAGTGCTTGC	4/214	NT	6.3%	intergenic (+69/‑98)	PP_1404/PP_5469	hypothetical protein/SAM‑dependent methyltransferase
	?	NC_002947	= 5594170	60 (0.820)					intergenic (‑66/+79)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	1603703 =	59 (0.810)	4 (0.060)	4/240	NT	6.7%	coding (751/1011 nt)	PP_1406	hypothetical protein
	?	NC_002947	1603735 =	55 (0.780)					coding (719/1011 nt)	PP_1406	hypothetical protein
*	?	NC_002947	1610482 =	56 (0.770)	4 (0.060)	4/236	NT	6.8%	intergenic (‑176/‑37)	PP_1411/PP_5470	GGDEF domain‑containing protein/hypothetical protein
	?	NC_002947	1610505 =	56 (0.810)					intergenic (‑199/‑14)	PP_1411/PP_5470	GGDEF domain‑containing protein/hypothetical protein
*	?	NC_002947	1631125 =	80 (1.100)	6 (0.090)	6/228	NT	8.0%	intergenic (+17/‑164)	PP_1430/lepA	DegP‑like serine endoprotease/elongation factor 4
	?	NC_002947	1631149 =	64 (0.950)					intergenic (+41/‑140)	PP_1430/lepA	DegP‑like serine endoprotease/elongation factor 4
*	?	NC_002947	1633955 =	70 (0.960)	6 (0.090)	6/226	NT	9.6%	intergenic (+7/‑157)	lepB/rnc	signal peptidase I/ribonuclease 3
	?	NC_002947	1633982 =	49 (0.740)					intergenic (+34/‑130)	lepB/rnc	signal peptidase I/ribonuclease 3
*	?	NC_002947	= 1640490	61 (0.840)	4 (0.060)	4/232	NT	6.3%	coding (503/957 nt)	cmoB	tRNA 5‑methoxyuridine(34) synthase CmoB
	?	NC_002947	= 1640514	61 (0.890)					coding (479/957 nt)	cmoB	tRNA 5‑methoxyuridine(34) synthase CmoB
*	?	NC_002947	1642089 =	59 (0.810)	4 (0.060)	4/240	NT	6.6%	coding (126/393 nt)	PP_1442	hypothetical protein
	?	NC_002947	1642134 =	57 (0.810)					coding (81/393 nt)	PP_1442	hypothetical protein
*	?	NC_002947	1648974 =	79 (1.080)	9 (0.140)	6/214	NT	13.1%	intergenic (‑211/+85)	oprB‑II/PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
	?	NC_002947	1649030 =	51 (0.810)					intergenic (‑267/+29)	oprB‑II/PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
*	?	NC_002947	= 1653994	55 (0.750)	7 (0.100)	6/238	NT	11.1%	coding (2817/4527 nt)	PP_1449	hypothetical protein
	?	NC_002947	= 1654014	59 (0.840)					coding (2797/4527 nt)	PP_1449	hypothetical protein
*	?	NC_002947	= 1674838	67 (0.920)	4 (0.060)	4/240	NT	5.6%	intergenic (+46/‑38)	dsbC/hom	thiol:disulfide interchange protein DsbC/homoserine dehydrogenase
	?	NC_002947	= 1674854	69 (0.980)					intergenic (+62/‑22)	dsbC/hom	thiol:disulfide interchange protein DsbC/homoserine dehydrogenase
*	?	NC_002947	1678654 =	84 (1.150)	6 (0.090)	5/230	NT	7.7%	intergenic (+94/+93)	PP_1473/PP_1474	hypothetical protein/hypothetical protein
	?	NC_002947	1678682 =	66 (0.980)					intergenic (+122/+65)	PP_1473/PP_1474	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1680241	73 (1.000)	4 (0.060)	4/232	NT	5.2%	coding (602/1200 nt)	PP_1475	CAIB/BAIF family protein
	?	NC_002947	= 1680252	77 (1.130)					coding (591/1200 nt)	PP_1475	CAIB/BAIF family protein
*	?	NC_002947	= 1696155	98 (1.340)	8 (0.120)	8/232	NT	7.8%	coding (146/2289 nt)	PP_1492	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 1696177	98 (1.440)					coding (168/2289 nt)	PP_1492	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	1715393 =	72 (0.990)	5 (0.070)	5/240	NT	7.2%	coding (297/831 nt)	PP_1510	carboxyvinyl‑carboxyphosphonate phosphorylmutase
	?	NC_002947	1715428 =	59 (0.840)					coding (332/831 nt)	PP_1510	carboxyvinyl‑carboxyphosphonate phosphorylmutase
*	?	NC_002947	1731205 =	39 (0.530)	20 (0.350)	16/192	NT	34.2%	intergenic (‑76/+115)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	1731297 =	47 (0.830)					intergenic (‑168/+23)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	= 1731232	40 (0.550)	5 (0.090)	5/192	NT	11.4%	intergenic (‑103/+88)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	= 1731268	47 (0.830)					intergenic (‑139/+52)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	= 1733606	53 (0.730)	4 (0.060)	4/240	NT	7.3%	coding (306/2592 nt)	PP_1526	beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	= 1733638	50 (0.710)					coding (274/2592 nt)	PP_1526	beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	1752267 =	75 (1.030)	7 (0.100)	6/236	NT	9.0%	coding (632/705 nt)	PP_1552	replication protein
	?	NC_002947	1752290 =	70 (1.010)					coding (655/705 nt)	PP_1552	replication protein
*	?	NC_002947	1753571 =	66 (0.900)	5 (0.070)	5/234	NT	7.6%	coding (499/1272 nt)	PP_1555	putative Phage integrase
	?	NC_002947	1753592 =	59 (0.860)					coding (520/1272 nt)	PP_1555	putative Phage integrase
*	?	NC_002947	= 1756192	56 (0.770)	8 (0.110)	7/242	NT	12.5%	coding (109/369 nt)	PP_1561	holin
	?	NC_002947	= 1756223	57 (0.800)					coding (140/369 nt)	PP_1561	holin
*	?	NC_002947	1764304 =	51 (0.700)	4 (0.060)	4/234	NT	6.9%	coding (170/735 nt)	PP_1573	major tail protein
	?	NC_002947	1764361 =	60 (0.870)					coding (227/735 nt)	PP_1573	major tail protein
*	?	NC_002947	1768617 =	81 (1.110)	4 (0.060)	4/238	NT	5.1%	coding (176/480 nt)	PP_1578	hypothetical protein
	?	NC_002947	1768641 =	70 (1.000)					coding (200/480 nt)	PP_1578	hypothetical protein
*	?	NC_002947	1778342 =	49 (0.670)	4 (0.060)	4/236	NT	7.8%	intergenic (‑156/‑41)	PP_1586/PP_1587	killer protein/NhaP‑type Na+(K+)/H+ antiporter
	?	NC_002947	1778369 =	48 (0.690)					intergenic (‑183/‑14)	PP_1586/PP_1587	killer protein/NhaP‑type Na+(K+)/H+ antiporter
*	?	NC_002947	1780109 =	58 (0.790)	19 (0.310)	15/210	NT	25.7%	intergenic (+26/+80)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
	?	NC_002947	1780171 =	61 (0.990)					intergenic (+88/+18)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
*	?	NC_002947	= 1780127	58 (0.790)	18 (0.290)	13/210	NT	24.7%	intergenic (+44/+62)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
	?	NC_002947	= 1780151	61 (0.990)					intergenic (+68/+38)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
*	?	NC_002947	1783477 =	83 (1.140)	5 (0.070)	4/234	NT	6.3%	coding (642/2703 nt)	glnD	uridylyltransferase
	?	NC_002947	1783499 =	71 (1.030)					coding (620/2703 nt)	glnD	uridylyltransferase
*	?	NC_002947	= 1800371	67 (0.920)	4 (0.060)	4/236	NT	5.6%	coding (313/3525 nt)	dnaEA	DNA polymerase III subunit alpha
	?	NC_002947	= 1800401	71 (1.020)					coding (343/3525 nt)	dnaEA	DNA polymerase III subunit alpha
*	?	NC_002947	= 1821027	0 (0.000)	3 (0.040)	3/238	NT	100%	coding (748/1422 nt)	PP_1624	group II intron‑encoding maturase
	?	NC_002947	= 2070376	NA (NA)					coding (707/1422 nt)	PP_1846	group II intron‑encoding maturase
*	?	NC_002947	= 1834630	64 (0.880)	4 (0.060)	4/238	NT	6.4%	coding (447/780 nt)	fpr‑I	ferredoxin‑‑NADP(+) reductase
	?	NC_002947	= 1834647	56 (0.800)					coding (464/780 nt)	fpr‑I	ferredoxin‑‑NADP(+) reductase
*	?	NC_002947	1838124 =	111 (1.520)	8 (0.120)	5/220	NT	8.0%	intergenic (+29/+75)	PP_1642/PP_1643	hypothetical protein/membrane protein
	?	NC_002947	1838184 =	85 (1.310)					intergenic (+89/+15)	PP_1642/PP_1643	hypothetical protein/membrane protein
*	?	NC_002947	= 1838723	82 (1.120)	5 (0.070)	5/230	NT	5.6%	coding (488/606 nt)	PP_1644	NAD(P)H dehydrogenase
	?	NC_002947	= 1838742	92 (1.360)					coding (469/606 nt)	PP_1644	NAD(P)H dehydrogenase
*	?	NC_002947	= 1842441	76 (1.040)	4 (0.060)	4/234	NT	5.5%	coding (2395/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	= 1842465	65 (0.940)					coding (2371/2754 nt)	gacS	sensor protein GacS
*	?	NC_002947	1844176 =	3 (0.040)	61 (0.870)	48/238	NT	69.8%	coding (660/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	= 2179419	50 (0.710)					intergenic (+175/+93)	PP_1931/PP_5486	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1844179	3 (0.040)	48 (0.680)	40/240	NT	51.4%	coding (657/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	2177745 =	88 (1.250)					intergenic (+103/‑63)	PP_5485/PP_1931	GNAT family acetyltransferase/hypothetical protein
*	?	NC_002947	= 1875397	77 (1.050)	7 (0.100)	5/236	NT	8.1%	coding (79/756 nt)	cobS	adenosylcobinamide‑GDP ribazoletransferase
	?	NC_002947	= 1875414	85 (1.220)					coding (96/756 nt)	cobS	adenosylcobinamide‑GDP ribazoletransferase
*	?	NC_002947	1899249 =	80 (1.100)	9 (0.130)	8/228	NT	10.0%	intergenic (+277/‑243)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	1899331 =	89 (1.330)					intergenic (+359/‑161)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	= 1899258	79 (1.080)	6 (0.090)	6/228	NT	6.9%	intergenic (+286/‑234)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	= 1899320	89 (1.330)					intergenic (+348/‑172)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	1906724 =	81 (1.110)	14 (0.240)	9/196	NT	19.6%	intergenic (+22/+106)	nirD/PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
	?	NC_002947	1906818 =	51 (0.890)					intergenic (+116/+12)	nirD/PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
*	?	NC_002947	1946569 =	80 (1.100)	6 (0.090)	6/234	NT	7.6%	intergenic (‑55/+29)	PP_1747/PP_1748	hypothetical protein/hypothetical protein
	?	NC_002947	1946592 =	71 (1.030)					intergenic (‑78/+6)	PP_1747/PP_1748	hypothetical protein/hypothetical protein
*	?	NC_002947	1947818 =	64 (0.880)	3 (0.050)	3/196	NT	5.7%	intergenic (‑36/+134)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
	?	NC_002947	1947937 =	49 (0.850)					intergenic (‑155/+15)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
*	?	NC_002947	= 1958834	65 (0.890)	6 (0.090)	6/238	NT	8.6%	coding (273/1395 nt)	fumC‑II	class 2 fumarate hydratase
	?	NC_002947	= 1958860	65 (0.930)					coding (247/1395 nt)	fumC‑II	class 2 fumarate hydratase
*	?	NC_002947	= 1963683	86 (1.180)	6 (0.080)	6/244	NT	6.4%	intergenic (+70/‑149)	PP_1760/yegE	ABC transporter ATP‑binding protein/phosphodiesterase domain‑containing diguanylate cyclase
	?	NC_002947	= 1963711	90 (1.250)					intergenic (+98/‑121)	PP_1760/yegE	ABC transporter ATP‑binding protein/phosphodiesterase domain‑containing diguanylate cyclase
*	?	NC_002947	= 1970782	98 (1.340)	12 (0.200)	9/208	NT	13.0%	intergenic (+33/‑233)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
	?	NC_002947	= 1970844	79 (1.290)					intergenic (+95/‑171)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
*	?	NC_002947	= 1976254	122 (1.670)	7 (0.110)	7/222	NT	5.7%	intergenic (+39/‑126)	pheA/PP_1770	bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase
	?	NC_002947	= 1976306	121 (1.850)					intergenic (+91/‑74)	pheA/PP_1770	bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase
*	?	NC_002947	2004645 =	50 (0.680)	10 (0.150)	8/230	NT	17.6%	intergenic (+92/+58)	PP_1787/PP_1788	hypothetical protein/hypothetical protein
	?	NC_002947	2004687 =	47 (0.690)					intergenic (+134/+16)	PP_1787/PP_1788	hypothetical protein/hypothetical protein
*	?	NC_002947	= 2042821	73 (1.000)	6 (0.080)	6/240	NT	7.3%	coding (46/762 nt)	PP_1817	short‑chain dehydrogenase/reductase family oxidoreductase
	?	NC_002947	= 2042842	81 (1.150)					coding (67/762 nt)	PP_1817	short‑chain dehydrogenase/reductase family oxidoreductase
*	?	NC_002947	2048837 =	48 (0.660)	9 (0.140)	6/214	NT	15.9%	intergenic (+33/+106)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	2048928 =	54 (0.860)					intergenic (+124/+15)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
*	?	NC_002947	= 2048853	47 (0.640)	8 (0.130)	6/214	NT	14.5%	intergenic (+49/+90)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	= 2048910	54 (0.860)					intergenic (+106/+33)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
*	?	NC_002947	= 2050638	51 (0.700)	5 (0.100)	5/174	NT	13.2%	intergenic (‑88/+87)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	= 2050674	30 (0.590)					intergenic (‑124/+51)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
*	?	NC_002947	= 2056021	70 (0.960)	5 (0.080)	5/216	NT	7.4%	intergenic (+27/‑116)	aroC/PP_1831	chorismate synthase/membrane protein
	?	NC_002947	= 2056095	65 (1.020)					intergenic (+101/‑42)	aroC/PP_1831	chorismate synthase/membrane protein
*	?	NC_002947	2066905 =	58 (0.790)	4 (0.060)	4/244	NT	5.9%	coding (412/972 nt)	PP_1843	Mg(2+)/Co(2+) transporter
	?	NC_002947	2066964 =	70 (0.970)					coding (353/972 nt)	PP_1843	Mg(2+)/Co(2+) transporter
*	?	NC_002947	= 2069216	79 (1.080)	6 (0.090)	5/226	NT	7.2%	intergenic (+20/‑454)	PP_t19/PP_1846	tRNA‑Ser/group II intron‑encoding maturase
	?	NC_002947	= 2069228	82 (1.230)					intergenic (+32/‑442)	PP_t19/PP_1846	tRNA‑Ser/group II intron‑encoding maturase
*	?	NC_002947	= 2085566	47 (0.640)	6 (0.080)	5/240	NT	9.3%	intergenic (+232/‑363)	PP_1864/PP_1865	hypothetical protein/transposase
	?	NC_002947	= 2087791	72 (1.020)					intergenic (+561/+357)	PP_1865/aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
*	?	NC_002947	= 2086714	NA (NA)	3 (0.040)	3/238	NT	NA	coding (786/1302 nt)	PP_1865	transposase
	?	NC_002947	= 2086737	NA (NA)					coding (809/1302 nt)	PP_1865	transposase
*	?	NC_002947	= 2087064	NA (NA)	18 (0.260)	12/238	NT	NA	coding (1136/1302 nt)	PP_1865	transposase
	?	NC_002947	= 2087083	NA (NA)					coding (1155/1302 nt)	PP_1865	transposase
*	?	NC_002947	= 2087787	76 (1.040)	7 (0.100)	6/236	NT	9.1%	intergenic (+557/+361)	PP_1865/aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
	?	NC_002947	= 2256253	68 (0.980)					intergenic (+270/‑434)	asd/PP_1990	aspartate‑semialdehyde dehydrogenase/transposase
*	?	NC_002947	= 2087787	76 (1.040)	4 (0.060)	4/236	NT	5.6%	intergenic (+557/+361)	PP_1865/aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
	?	NC_002947	4022839 =	63 (0.910)					intergenic (‑490/+178)	PP_3547/emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
*	?	NC_002947	2095171 =	66 (0.900)	4 (0.060)	4/240	NT	5.9%	intergenic (‑179/+138)	htpX/alaA	protease HtpX/glutamate‑pyruvate aminotransferase
	?	NC_002947	2095200 =	63 (0.890)					intergenic (‑208/+109)	htpX/alaA	protease HtpX/glutamate‑pyruvate aminotransferase
*	?	NC_002947	= 2099989	99 (1.360)	15 (0.210)	7/248	NT	13.3%	intergenic (‑57/‑148)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	= 2100110	97 (1.330)					intergenic (‑178/‑27)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	2102968 =	58 (0.790)	7 (0.100)	5/236	NT	11.6%	noncoding (40/76 nt)	PP_t22	tRNA‑Glu
	?	NC_002947	2242257 =	52 (0.750)					noncoding (33/76 nt)	PP_t30	tRNA‑Glu
*	?	NC_002947	2137636 =	54 (0.740)	4 (0.060)	3/240	NT	6.3%	coding (453/624 nt)	gstB	glutathione S‑transferase
	?	NC_002947	2137733 =	67 (0.950)					coding (550/624 nt)	gstB	glutathione S‑transferase
*	?	NC_002947	= 2137856	52 (0.710)	5 (0.070)	5/232	NT	9.0%	intergenic (+49/‑85)	gstB/yadG	glutathione S‑transferase/ABC transporter ATP‑binding protein
	?	NC_002947	= 2137870	53 (0.780)					intergenic (+63/‑71)	gstB/yadG	glutathione S‑transferase/ABC transporter ATP‑binding protein
*	?	NC_002947	= 2143416	90 (1.230)	6 (0.090)	6/232	NT	6.3%	coding (153/435 nt)	PP_1899	ExbD/TolR family protein
	?	NC_002947	= 2143445	93 (1.360)					coding (182/435 nt)	PP_1899	ExbD/TolR family protein
*	?	NC_002947	2158904 =	57 (0.780)	8 (0.120)	7/228	NT	13.3%	intergenic (+30/‑158)	acpP/fabF	acyl carrier protein/beta‑ketoacyl‑ACP synthase II
	?	NC_002947	2158937 =	52 (0.780)					intergenic (+63/‑125)	acpP/fabF	acyl carrier protein/beta‑ketoacyl‑ACP synthase II
*	?	NC_002947	2166742 =	82 (1.120)	4 (0.060)	4/232	NT	5.2%	intergenic (‑543/‑238)	PP_5483/PP_1921	hypothetical protein/hypothetical protein
	?	NC_002947	2166761 =	68 (1.000)					intergenic (‑562/‑219)	PP_5483/PP_1921	hypothetical protein/hypothetical protein
*	?	NC_002947	2219105 =	65 (0.890)	4 (0.060)	4/234	NT	6.1%	coding (1020/1161 nt)	PP_1959	hypothetical protein
	?	NC_002947	2219135 =	61 (0.890)					coding (990/1161 nt)	PP_1959	hypothetical protein
*	?	NC_002947	= 2245187	73 (1.000)	6 (0.090)	6/230	NT	7.8%	coding (690/972 nt)	dusC	tRNA‑dihydrouridine synthase DusC
	?	NC_002947	= 2245219	75 (1.110)					coding (722/972 nt)	dusC	tRNA‑dihydrouridine synthase DusC
*	?	NC_002947	2245492 =	76 (1.040)	4 (0.070)	4/202	NT	6.5%	intergenic (+23/‑313)	dusC/ibpA	tRNA‑dihydrouridine synthase DusC/small heat shock protein IbpA
	?	NC_002947	2245596 =	53 (0.890)					intergenic (+127/‑209)	dusC/ibpA	tRNA‑dihydrouridine synthase DusC/small heat shock protein IbpA
*	?	NC_002947	= 2258102	NA (NA)	7 (0.100)	5/232	NT	18.5%	intergenic (+114/‑278)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
	?	NC_002947	= 2258195	33 (0.450)					intergenic (+207/‑185)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
*	?	NC_002947	2258188 =	29 (0.400)	12 (0.170)	9/244	NT	29.6%	intergenic (+200/‑192)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
	?	NC_002947	= 4908127	NA (NA)					intergenic (‑58/‑224)	PP_4317/PP_4318	hypothetical protein/transposase
*	?	NC_002947	= 2274386	100 (1.370)	5 (0.070)	4/238	NT	5.0%	coding (24/1041 nt)	PP_2004	AraC family transcriptional regulator
	?	NC_002947	= 2274398	94 (1.340)					coding (12/1041 nt)	PP_2004	AraC family transcriptional regulator
*	?	NC_002947	= 2295816	82 (1.120)	9 (0.130)	5/238	NT	12.3%	intergenic (+19/+114)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	= 2295903	50 (0.710)					intergenic (+106/+27)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	2295818 =	75 (1.030)	6 (0.100)	5/200	NT	10.6%	intergenic (+21/+112)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	2295903 =	41 (0.700)					intergenic (+106/+27)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	= 2301552	73 (1.000)	10 (0.150)	10/220	NT	12.9%	intergenic (‑153/‑178)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	= 2301609	70 (1.080)					intergenic (‑210/‑121)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
*	?	NC_002947	2340738 =	64 (0.880)	6 (0.090)	7/232	NT	10.5%	intergenic (+29/‑86)	dctA‑II/yraO	C4‑dicarboxylate transport protein/transporter YraO
	?	NC_002947	2340765 =	42 (0.620)					intergenic (+56/‑59)	dctA‑II/yraO	C4‑dicarboxylate transport protein/transporter YraO
*	?	NC_002947	= 2344206	51 (0.700)	4 (0.060)	4/234	NT	7.8%	coding (143/456 nt)	soxR	DNA‑binding transcriptional regulator
	?	NC_002947	= 2344217	47 (0.680)					coding (132/456 nt)	soxR	DNA‑binding transcriptional regulator
*	?	NC_002947	2366860 =	62 (0.850)	5 (0.070)	5/236	NT	8.1%	coding (196/459 nt)	PP_2079	hypothetical protein
	?	NC_002947	2366889 =	54 (0.780)					coding (167/459 nt)	PP_2079	hypothetical protein
*	?	NC_002947	= 2387701	62 (0.850)	4 (0.060)	4/238	NT	6.1%	coding (418/1023 nt)	pyrD	dihydroorotate dehydrogenase
	?	NC_002947	= 2387735	63 (0.900)					coding (452/1023 nt)	pyrD	dihydroorotate dehydrogenase
*	?	NC_002947	2396082 =	65 (0.890)	4 (0.060)	4/240	NT	5.2%	coding (3618/3636 nt)	PP_2100	two‑component system sensor protein
	?	NC_002947	2396139 =	84 (1.190)					coding (3561/3636 nt)	PP_2100	two‑component system sensor protein
*	?	NC_002947	2401229 =	94 (1.290)	5 (0.070)	5/230	NT	5.8%	coding (703/1332 nt)	dgt	deoxyguanosinetriphosphate triphosphohydrolase‑like protein
	?	NC_002947	2401261 =	74 (1.090)					coding (671/1332 nt)	dgt	deoxyguanosinetriphosphate triphosphohydrolase‑like protein
*	?	NC_002947	2412892 =	94 (1.290)	6 (0.090)	4/232	NT	7.3%	intergenic (+113/‑308)	rlmM/PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
	?	NC_002947	2412985 =	64 (0.940)					intergenic (+206/‑215)	rlmM/PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
*	?	NC_002947	= 2414801	56 (0.770)	5 (0.070)	5/242	NT	8.4%	intergenic (+300/‑45)	PP_2114/PP_2115	transposase/hypothetical protein
	?	NC_002947	= 2530737	NA (NA)					intergenic (+113/‑68)	PP_2218/PP_2219	transposase/hypothetical protein
*	?	NC_002947	2429928 =	63 (0.860)	6 (0.110)	5/182	NT	14.6%	intergenic (+15/+98)	PP_2129/PP_2130	hypothetical protein/lytic transglycosylase
	?	NC_002947	2430009 =	24 (0.450)					intergenic (+96/+17)	PP_2129/PP_2130	hypothetical protein/lytic transglycosylase
*	?	NC_002947	2436499 =	14 (0.190)	3 (0.040)	3/238	NT	26.7%	intergenic (+34/‑625)	PP_2134/fadB	transposase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase
	?	NC_002947	= 6038047	3 (0.040)					intergenic (+193/+24)	argB/PP_5290	acetylglutamate kinase/transposase
*	?	NC_002947	2436654 =	68 (0.930)	4 (0.060)	4/228	NT	6.1%	intergenic (+189/‑470)	PP_2134/fadB	transposase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase
	?	NC_002947	2436709 =	61 (0.910)					intergenic (+244/‑415)	PP_2134/fadB	transposase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase
*	?	NC_002947	2466081 =	65 (0.890)	5 (0.070)	3/238	NT	7.4%	coding (277/681 nt)	copR‑I	transcriptional regulator
	?	NC_002947	2466131 =	63 (0.900)					coding (227/681 nt)	copR‑I	transcriptional regulator
*	?	NC_002947	2503985 =	68 (0.930)	4 (0.060)	4/238	NT	5.5%	coding (69/318 nt)	PP_2197	hypothetical protein
	?	NC_002947	2504006 =	71 (1.010)					coding (90/318 nt)	PP_2197	hypothetical protein
*	?	NC_002947	2563319 =	60 (0.820)	6 (0.090)	6/236	NT	9.6%	coding (1014/1137 nt)	dauA	FAD‑dependent catabolic D‑arginine dehydrogenase
	?	NC_002947	2563353 =	56 (0.810)					coding (1048/1137 nt)	dauA	FAD‑dependent catabolic D‑arginine dehydrogenase
*	?	NC_002947	= 2577167	84 (1.150)	8 (0.120)	5/226	NT	8.7%	coding (1271/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 2577215	92 (1.380)					coding (1223/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
*	?	NC_002947	= 2577388	64 (0.880)	6 (0.090)	6/238	NT	8.7%	coding (1050/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 2577405	64 (0.910)					coding (1033/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
*	?	NC_002947	2628627 =	71 (0.970)	6 (0.090)	5/238	NT	8.4%	coding (246/642 nt)	clpP	ATP‑dependent Clp protease proteolytic subunit
	?	NC_002947	2628652 =	62 (0.890)					coding (271/642 nt)	clpP	ATP‑dependent Clp protease proteolytic subunit
*	?	NC_002947	= 2738232	73 (1.000)	4 (0.060)	4/230	NT	5.1%	coding (568/4494 nt)	PP_2395	leucine‑rich repeat‑containing protein
	?	NC_002947	= 2738250	80 (1.180)					coding (586/4494 nt)	PP_2395	leucine‑rich repeat‑containing protein
*	?	NC_002947	= 2792897	60 (0.820)	4 (0.060)	4/236	NT	6.5%	coding (184/240 nt)	PP_5524	hypothetical protein
	?	NC_002947	= 2792919	58 (0.840)					coding (206/240 nt)	PP_5524	hypothetical protein
*	?	NC_002947	= 2889578	74 (1.010)	4 (0.060)	4/238	NT	5.2%	coding (543/1413 nt)	gabP‑II	gamma‑aminobutyrate permease
	?	NC_002947	= 2889591	74 (1.060)					coding (556/1413 nt)	gabP‑II	gamma‑aminobutyrate permease
*	?	NC_002947	2909065 =	74 (1.010)	4 (0.060)	4/230	NT	5.3%	coding (1416/1737 nt)	aprDA	alkaline protease secretion ABC transporter ATP‑binding protein
	?	NC_002947	2909101 =	75 (1.110)					coding (1380/1737 nt)	aprDA	alkaline protease secretion ABC transporter ATP‑binding protein
*	?	NC_002947	2911614 =	81 (1.110)	7 (0.100)	6/246	NT	8.1%	coding (591/10827 nt)	PP_2561	hemolysin‑type calcium‑binding bacteriocin
	?	NC_002947	2911640 =	79 (1.090)					coding (617/10827 nt)	PP_2561	hemolysin‑type calcium‑binding bacteriocin
*	?	NC_002947	= 2954675	96 (1.320)	10 (0.150)	10/226	NT	10.1%	intergenic (‑135/‑146)	PP_2586/PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
	?	NC_002947	= 2954738	91 (1.370)					intergenic (‑198/‑83)	PP_2586/PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
*	?	NC_002947	2957131 =	58 (0.790)	8 (0.120)	8/230	NT	11.6%	intergenic (+43/‑153)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
	?	NC_002947	2957186 =	68 (1.010)					intergenic (+98/‑98)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
*	?	NC_002947	2958817 =	45 (0.620)	5 (0.080)	12/216	NT	11.6%	intergenic (+40/+102)	PP_2589/PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
	?	NC_002947	2958876 =	37 (0.580)					intergenic (+99/+43)	PP_2589/PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
*	?	NC_002947	3057317 =	94 (1.290)	6 (0.090)	5/236	NT	6.5%	coding (74/990 nt)	PP_2669	outer membrane protein
	?	NC_002947	3057349 =	83 (1.200)					coding (42/990 nt)	PP_2669	outer membrane protein
*	?	NC_002947	3059570 =	59 (0.810)	4 (0.060)	4/234	NT	7.2%	coding (806/1275 nt)	PP_2671	sensor histidine kinase
	?	NC_002947	3059604 =	47 (0.680)					coding (840/1275 nt)	PP_2671	sensor histidine kinase
*	?	NC_002947	3163781 =	64 (0.880)	9 (0.130)	8/238	NT	12.6%	coding (528/1278 nt)	PP_2778	3‑oxoacyl‑ACP synthase
	?	NC_002947	3163807 =	63 (0.900)					coding (554/1278 nt)	PP_2778	3‑oxoacyl‑ACP synthase
*	?	NC_002947	3167651 =	76 (1.040)	6 (0.090)	6/238	NT	7.8%	coding (745/1212 nt)	PP_2781	beta‑ketoacyl synthase
	?	NC_002947	3167676 =	68 (0.970)					coding (770/1212 nt)	PP_2781	beta‑ketoacyl synthase
*	?	NC_002947	= 3195118	43 (0.590)	4 (0.060)	4/242	NT	9.4%	coding (992/1185 nt)	dhaT	1,3‑propanediol dehydrogenase
	?	NC_002947	= 3195135	35 (0.490)					coding (975/1185 nt)	dhaT	1,3‑propanediol dehydrogenase
*	?	NC_002947	3217808 =	54 (0.740)	4 (0.060)	4/238	NT	6.8%	coding (555/1407 nt)	oprJ	outer membrane protein OprJ
	?	NC_002947	3217848 =	58 (0.830)					coding (595/1407 nt)	oprJ	outer membrane protein OprJ
*	?	NC_002947	= 3217876	62 (0.850)	5 (0.070)	5/236	NT	7.4%	coding (623/1407 nt)	oprJ	outer membrane protein OprJ
	?	NC_002947	= 3217899	67 (0.960)					coding (646/1407 nt)	oprJ	outer membrane protein OprJ
*	?	NC_002947	3223871 =	73 (1.000)	4 (0.060)	4/238	NT	5.6%	coding (106/681 nt)	PP_2824	TetR family transcriptional regulator
	?	NC_002947	3223902 =	65 (0.930)					coding (75/681 nt)	PP_2824	TetR family transcriptional regulator
*	?	NC_002947	3239122 =	112 (1.530)	5 (0.080)	5/226	NT	5.1%	coding (210/1311 nt)	PP_2837	uronate transporter
	?	NC_002947	3239184 =	86 (1.290)					coding (272/1311 nt)	PP_2837	uronate transporter
*	?	NC_002947	3295035 =	75 (1.030)	4 (0.060)	4/232	NT	5.9%	intergenic (‑27/+49)	PP_2894/PP_2895	hypothetical protein/hypothetical protein
	?	NC_002947	3295062 =	58 (0.850)					intergenic (‑54/+22)	PP_2894/PP_2895	hypothetical protein/hypothetical protein
*	?	NC_002947	3310011 =	47 (0.640)	4 (0.060)	4/242	NT	8.0%	coding (1083/1251 nt)	lhgO	L‑2‑hydroxyglutarate oxidase
	?	NC_002947	3310037 =	46 (0.650)					coding (1109/1251 nt)	lhgO	L‑2‑hydroxyglutarate oxidase
*	?	NC_002947	3339160 =	87 (1.190)	7 (0.120)	7/204	NT	8.5%	intergenic (‑119/+124)	PP_2935/ybiT	membrane protein/ABC‑F family ATPase
	?	NC_002947	3339248 =	80 (1.330)					intergenic (‑207/+36)	PP_2935/ybiT	membrane protein/ABC‑F family ATPase
*	?	NC_002947	3355356 =	68 (0.930)	6 (0.090)	6/236	NT	8.4%	coding (519/567 nt)	PP_2951	TetR family transcriptional regulator
	?	NC_002947	3355376 =	66 (0.950)					coding (499/567 nt)	PP_2951	TetR family transcriptional regulator
*	?	NC_002947	= 3359306	63 (0.860)	4 (0.060)	4/226	NT	5.8%	coding (420/912 nt)	PP_2955	CorA family magnesium/cobalt transporter
	?	NC_002947	= 3359316	73 (1.100)					coding (410/912 nt)	PP_2955	CorA family magnesium/cobalt transporter
*	?	NC_002947	3359983 =	80 (1.100)	8 (0.110)	7/242	NT	9.9%	coding (1327/1581 nt)	PP_2956	ribosomal protein S6 modification protein‑like protein
	?	NC_002947	3360015 =	68 (0.950)					coding (1295/1581 nt)	PP_2956	ribosomal protein S6 modification protein‑like protein
*	?	NC_002947	= 3409923	47 (0.640)	6 (0.090)	6/234	NT	11.2%	intergenic (‑446/‑90)	PP_3022/PP_3024	AraC family transcriptional regulator/hypothetical protein
	?	NC_002947	= 3409954	51 (0.740)					intergenic (‑477/‑59)	PP_3022/PP_3024	AraC family transcriptional regulator/hypothetical protein
*	?	NC_002947	3441491 =	79 (1.080)	4 (0.060)	4/244	NT	5.0%	coding (207/3270 nt)	PP_3062	tail length determination protein
	?	NC_002947	3441522 =	74 (1.030)					coding (238/3270 nt)	PP_3062	tail length determination protein
*	?	NC_002947	3464300 =	100 (1.370)	6 (0.100)	6/200	NT	7.5%	coding (101/1929 nt)	PP_3078	ABC transporter substrate‑binding protein
	?	NC_002947	3464387 =	68 (1.160)					coding (14/1929 nt)	PP_3078	ABC transporter substrate‑binding protein
*	?	NC_002947	= 3522813	65 (0.890)	5 (0.070)	4/242	NT	6.7%	intergenic (+557/‑140)	PP_5584/PP_3113	hypothetical protein/transposase
	?	NC_002947	= 3522862	76 (1.070)					intergenic (+606/‑91)	PP_5584/PP_3113	hypothetical protein/transposase
*	?	NC_002947	= 3531071	61 (0.840)	6 (0.090)	6/238	NT	8.7%	coding (2845/3102 nt)	dnaEB	error‑prone DNA polymerase
	?	NC_002947	= 3531098	67 (0.960)					coding (2872/3102 nt)	dnaEB	error‑prone DNA polymerase
*	?	NC_002947	= 3542087	88 (1.210)	8 (0.120)	8/234	NT	8.6%	coding (679/966 nt)	galE	UDP‑glucose 4‑epimerase
	?	NC_002947	= 3542107	86 (1.250)					coding (659/966 nt)	galE	UDP‑glucose 4‑epimerase
*	?	NC_002947	3543953 =	60 (0.820)	6 (0.090)	6/234	NT	9.8%	coding (1525/2607 nt)	PP_3130	hypothetical protein
	?	NC_002947	3543976 =	54 (0.780)					coding (1502/2607 nt)	PP_3130	hypothetical protein
*	?	NC_002947	= 3543959	63 (0.860)	4 (0.060)	4/234	NT	6.6%	coding (1519/2607 nt)	PP_3130	hypothetical protein
	?	NC_002947	= 3543968	54 (0.780)					coding (1510/2607 nt)	PP_3130	hypothetical protein
*	?	NC_002947	3545193 =	77 (1.050)	4 (0.060)	4/240	NT	5.2%	coding (285/2607 nt)	PP_3130	hypothetical protein
	?	NC_002947	3545232 =	72 (1.020)					coding (246/2607 nt)	PP_3130	hypothetical protein
*	?	NC_002947	= 3571891	44 (0.600)	4 (0.060)	4/236	NT	8.4%	intergenic (+10/‑117)	yneJ/PP_3153	LysR family DNA‑binding transcriptional regulator/hypothetical protein
	?	NC_002947	= 3571910	45 (0.650)					intergenic (+29/‑98)	yneJ/PP_3153	LysR family DNA‑binding transcriptional regulator/hypothetical protein
*	?	NC_002947	= 3581436	47 (0.640)	4 (0.060)	4/236	NT	7.8%	coding (489/942 nt)	PP_3160	hypothetical protein
	?	NC_002947	= 3581450	50 (0.720)					coding (503/942 nt)	PP_3160	hypothetical protein
*	?	NC_002947	= 3581719	52 (0.710)	5 (0.070)	5/230	NT	9.0%	coding (772/942 nt)	PP_3160	hypothetical protein
	?	NC_002947	= 3581735	53 (0.780)					coding (788/942 nt)	PP_3160	hypothetical protein
*	?	NC_002947	= 3588159	68 (0.930)	5 (0.080)	5/208	NT	7.2%	intergenic (+37/‑38)	catA‑II/benE‑II	catechol 1,2‑dioxygenase/benzoate transport protein
	?	NC_002947	= 3588187	72 (1.180)					intergenic (+65/‑10)	catA‑II/benE‑II	catechol 1,2‑dioxygenase/benzoate transport protein
*	?	NC_002947	= 3617753	62 (0.850)	4 (0.060)	4/234	NT	5.6%	coding (735/1170 nt)	PP_3188	hypothetical protein
	?	NC_002947	= 3617786	77 (1.120)					coding (768/1170 nt)	PP_3188	hypothetical protein
*	?	NC_002947	= 3676073	55 (0.750)	5 (0.080)	5/220	NT	8.6%	intergenic (+37/+55)	PP_3240/PP_5592	hypothetical protein/hypothetical protein
	?	NC_002947	= 3676096	57 (0.880)					intergenic (+60/+32)	PP_3240/PP_5592	hypothetical protein/hypothetical protein
*	?	NC_002947	3676890 =	86 (1.180)	5 (0.070)	4/236	NT	5.9%	intergenic (‑2/‑151)	PP_3241/PP_3242	hypothetical protein/GGDEF domain‑containing protein
	?	NC_002947	3676946 =	77 (1.110)					intergenic (‑58/‑95)	PP_3241/PP_3242	hypothetical protein/GGDEF domain‑containing protein
*	?	NC_002947	= 3725182	81 (1.110)	5 (0.070)	5/240	NT	5.9%	coding (709/927 nt)	PP_3290	universal stress protein family protein
	?	NC_002947	= 3725208	82 (1.160)					coding (735/927 nt)	PP_3290	universal stress protein family protein
*	?	NC_002947	3727744 =	64 (0.880)	4 (0.060)	4/240	NT	6.1%	coding (217/426 nt)	PP_3293	membrane protein
	?	NC_002947	3727762 =	61 (0.860)					coding (199/426 nt)	PP_3293	membrane protein
*	?	NC_002947	= 3734840	70 (0.960)	4 (0.060)	4/242	NT	5.3%	coding (794/1104 nt)	PP_3301	RND transporter membrane fusion protein
	?	NC_002947	= 3734922	76 (1.070)					coding (876/1104 nt)	PP_3301	RND transporter membrane fusion protein
*	?	NC_002947	3797037 =	78 (1.070)	6 (0.090)	6/236	NT	7.4%	coding (1000/1449 nt)	vdh	vanillin dehydrogenase
	?	NC_002947	3797067 =	76 (1.090)					coding (970/1449 nt)	vdh	vanillin dehydrogenase
*	?	NC_002947	= 3830168	72 (0.990)	5 (0.070)	5/230	NT	7.4%	coding (1255/1785 nt)	PP_3383	gluconate 2‑dehydrogenase flavoprotein subunit
	?	NC_002947	= 3830208	59 (0.870)					coding (1215/1785 nt)	PP_3383	gluconate 2‑dehydrogenase flavoprotein subunit
*	?	NC_002947	3904016 =	63 (0.860)	6 (0.090)	6/230	NT	9.9%	coding (771/1593 nt)	ilvA‑I	threonine deaminase
	?	NC_002947	3904067 =	51 (0.750)					coding (720/1593 nt)	ilvA‑I	threonine deaminase
*	?	NC_002947	= 3931084	69 (0.950)	4 (0.060)	4/236	NT	5.8%	coding (68/1293 nt)	PP_5603	FAD dependent oxidoreductase
	?	NC_002947	= 3931100	65 (0.940)					coding (52/1293 nt)	PP_5603	FAD dependent oxidoreductase
*	?	NC_002947	3947957 =	46 (0.630)	8 (0.140)	8/192	NT	18.1%	coding (136/1797 nt)	PP_3483	type II secretion system protein
	?	NC_002947	3948042 =	37 (0.660)					coding (51/1797 nt)	PP_3483	type II secretion system protein
*	?	NC_002947	= 3947984	45 (0.620)	10 (0.180)	9/192	NT	21.8%	coding (109/1797 nt)	PP_3483	type II secretion system protein
	?	NC_002947	= 3948013	37 (0.660)					coding (80/1797 nt)	PP_3483	type II secretion system protein
*	?	NC_002947	3951114 =	90 (1.230)	4 (0.070)	4/192	NT	6.8%	intergenic (‑34/+161)	PP_3486/PP_3487	cytochrome c/hypothetical protein
	?	NC_002947	3951230 =	40 (0.710)					intergenic (‑150/+45)	PP_3486/PP_3487	cytochrome c/hypothetical protein
*	?	NC_002947	3952711 =	71 (0.970)	4 (0.060)	4/230	NT	5.8%	coding (1856/1977 nt)	PP_5606	YVTN beta‑propeller repeat‑containing protein
	?	NC_002947	3952752 =	65 (0.960)					coding (1815/1977 nt)	PP_5606	YVTN beta‑propeller repeat‑containing protein
*	?	NC_002947	= 3954595	67 (0.920)	5 (0.070)	5/236	NT	7.1%	coding (5834/5844 nt)	mnxG	manganese‑oxidizing multicopper oxidase
	?	NC_002947	= 3954608	68 (0.980)					coding (5821/5844 nt)	mnxG	manganese‑oxidizing multicopper oxidase
*	?	NC_002947	3968919 =	18 (0.250)	12 (0.170)	7/240	NT	25.2%	coding (1003/1179 nt)	PP_3498	transposase
	?	NC_002947	3969010 =	54 (0.760)					coding (1094/1179 nt)	PP_3498	transposase
*	?	NC_002947	3977670 =	76 (1.040)	7 (0.100)	7/244	NT	8.7%	coding (3005/3762 nt)	cobN	aerobic cobaltochelatase subunit CobN
	?	NC_002947	3977699 =	73 (1.020)					coding (2976/3762 nt)	cobN	aerobic cobaltochelatase subunit CobN
*	?	NC_002947	= 3978404	63 (0.860)	6 (0.090)	6/238	NT	8.3%	coding (2271/3762 nt)	cobN	aerobic cobaltochelatase subunit CobN
	?	NC_002947	= 3978429	72 (1.030)					coding (2246/3762 nt)	cobN	aerobic cobaltochelatase subunit CobN
*	?	NC_002947	= 4003395	54 (0.740)	6 (0.090)	6/234	NT	9.4%	intergenic (+9/+74)	PP_3531/PP_3532	hypothetical protein/AsnC family transcriptional regulator
	?	NC_002947	= 4003419	65 (0.940)					intergenic (+33/+50)	PP_3531/PP_3532	hypothetical protein/AsnC family transcriptional regulator
*	?	NC_002947	= 4016197	60 (0.820)	6 (0.080)	6/246	NT	9.1%	coding (55/1410 nt)	PP_3544	GntR family transcriptional regulator
	?	NC_002947	= 4016216	60 (0.830)					coding (74/1410 nt)	PP_3544	GntR family transcriptional regulator
*	?	NC_002947	4043100 =	67 (0.920)	4 (0.060)	4/244	NT	5.9%	coding (688/978 nt)	PP_3564	AraC family transcriptional regulator
	?	NC_002947	4043129 =	62 (0.860)					coding (659/978 nt)	PP_3564	AraC family transcriptional regulator
*	?	NC_002947	= 4074083	NA (NA)	17 (0.240)	15/238	NT	NA	intergenic (‑577/+47)	mdtA/PP_3586	multidrug transporter membrane fusion protein/transposase
	?	NC_002947	= 4302691	NA (NA)					intergenic (+1137/‑163)	PP_3774/PP_5627	hypothetical protein/hypothetical protein
*	?	NC_002947	= 4075780	NA (NA)	4 (0.060)	4/238	NT	NA	intergenic (‑322/+119)	PP_3586/tpx	transposase/2‑Cys peroxiredoxin
	?	NC_002947	= 4302691	NA (NA)					intergenic (+1137/‑163)	PP_3774/PP_5627	hypothetical protein/hypothetical protein
*	?	NC_002947	= 4094693	84 (1.150)	6 (0.090)	4/224	NT	7.5%	intergenic (+65/+70)	PP_3602/PP_3603	2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator
	?	NC_002947	= 4094738	73 (1.110)					intergenic (+110/+25)	PP_3602/PP_3603	2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator
*	?	NC_002947	= 4098626	74 (1.010)	4 (0.060)	4/238	NT	5.1%	coding (108/975 nt)	qor‑II	quinone oxidoreductase
	?	NC_002947	= 4098645	78 (1.110)					coding (89/975 nt)	qor‑II	quinone oxidoreductase
*	?	NC_002947	4117130 =	58 (0.790)	3 (0.040)	3/236	NT	5.3%	coding (231/456 nt)	iorA‑II	isoquinoline 1‑oxidoreductase subunit alpha
	?	NC_002947	4117168 =	52 (0.750)					coding (269/456 nt)	iorA‑II	isoquinoline 1‑oxidoreductase subunit alpha
*	?	NC_002947	= 4120653	90 (1.230)	8 (0.110)	7/248	NT	8.4%	coding (1025/1344 nt)	adhB	alcohol dehydrogenase cytochrome c subunit
	?	NC_002947	= 4120679	85 (1.160)					coding (1051/1344 nt)	adhB	alcohol dehydrogenase cytochrome c subunit
*	?	NC_002947	4128161 =	65 (0.890)	7 (0.100)	6/240	NT	10.0%	coding (486/651 nt)	htrG	signal transduction protein
	?	NC_002947	4128196 =	63 (0.890)					coding (521/651 nt)	htrG	signal transduction protein
*	?	NC_002947	4140927 =	57 (0.780)	3 (0.040)	3/234	NT	5.3%	coding (511/597 nt)	PP_5609	hypothetical protein
	?	NC_002947	4140960 =	53 (0.770)					coding (544/597 nt)	PP_5609	hypothetical protein
*	?	NC_002947	4141033 =	61 (0.840)	5 (0.070)	5/238	NT	8.4%	intergenic (+20/‑49)	PP_5609/PP_3645	hypothetical protein/L‑proline amide hydrolase
	?	NC_002947	4141061 =	51 (0.730)					intergenic (+48/‑21)	PP_5609/PP_3645	hypothetical protein/L‑proline amide hydrolase
*	?	NC_002947	4145442 =	80 (1.100)	4 (0.060)	4/234	NT	5.3%	coding (196/564 nt)	atnUDX	NUDIX hydrolase
	?	NC_002947	4145469 =	68 (0.990)					coding (223/564 nt)	atnUDX	NUDIX hydrolase
*	?	NC_002947	= 4150085	59 (0.810)	12 (0.190)	10/212	NT	17.9%	intergenic (+40/‑357)	PP_3654/PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
	?	NC_002947	= 4150116	60 (0.960)					intergenic (+71/‑326)	PP_3654/PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
*	?	NC_002947	4159113 =	132 (1.810)	16 (0.250)	11/222	NT	13.1%	intergenic (+17/‑192)	PP_3661/PP_3662	membrane protein/hypothetical protein
	?	NC_002947	4159201 =	95 (1.460)					intergenic (+105/‑104)	PP_3661/PP_3662	membrane protein/hypothetical protein
*	?	NC_002947	4165837 =	55 (0.750)	3 (0.040)	3/234	NT	5.7%	coding (309/1335 nt)	PP_3666	MHS family metabolite MFS transporter
	?	NC_002947	4165876 =	47 (0.680)					coding (270/1335 nt)	PP_3666	MHS family metabolite MFS transporter
*	?	NC_002947	4240195 =	73 (1.000)	5 (0.080)	5/224	NT	7.2%	coding (139/900 nt)	PP_3717	LuxR family transcriptional regulator
	?	NC_002947	4240236 =	63 (0.960)					coding (98/900 nt)	PP_3717	LuxR family transcriptional regulator
*	?	NC_002947	= 4240206	72 (0.990)	5 (0.080)	4/224	NT	7.2%	coding (128/900 nt)	PP_3717	LuxR family transcriptional regulator
	?	NC_002947	= 4240223	63 (0.960)					coding (111/900 nt)	PP_3717	LuxR family transcriptional regulator
*	?	NC_002947	= 4268676	65 (0.890)	6 (0.090)	5/236	NT	9.4%	coding (669/1341 nt)	PP_3740	MFS transporter
	?	NC_002947	= 4268725	54 (0.780)					coding (620/1341 nt)	PP_3740	MFS transporter
*	?	NC_002947	4314826 =	82 (1.120)	4 (0.060)	4/230	NT	5.2%	coding (984/1209 nt)	aspC	aminotransferase
	?	NC_002947	4314858 =	71 (1.050)					coding (1016/1209 nt)	aspC	aminotransferase
*	?	NC_002947	= 4315189	51 (0.700)	4 (0.060)	4/234	NT	7.6%	coding (142/918 nt)	PP_3787	hypothetical protein
	?	NC_002947	= 4315214	49 (0.710)					coding (167/918 nt)	PP_3787	hypothetical protein
*	?	NC_002947	4326925 =	59 (0.810)	4 (0.060)	4/230	NT	6.8%	intergenic (+24/‑152)	pvdA/PP_3797	L‑ornithine 5‑monooxygenase/membrane protein
	?	NC_002947	4326955 =	55 (0.810)					intergenic (+54/‑122)	pvdA/PP_3797	L‑ornithine 5‑monooxygenase/membrane protein
*	?	NC_002947	= 4330908	97 (1.330)	7 (0.100)	6/234	NT	6.6%	coding (310/747 nt)	PP_3802	cation ABC transporter ATP‑binding protein
	?	NC_002947	= 4330959	107 (1.550)					coding (361/747 nt)	PP_3802	cation ABC transporter ATP‑binding protein
*	?	NC_002947	= 4340118	25 (0.340)	14 (0.270)	9/180	NT	36.3%	intergenic (+59/‑272)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
	?	NC_002947	= 4340134	31 (0.590)					intergenic (+75/‑256)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
*	?	NC_002947	= 4344345	70 (0.960)	5 (0.080)	5/210	NT	7.1%	intergenic (+32/‑124)	PP_3817/PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
	?	NC_002947	= 4344365	71 (1.150)					intergenic (+52/‑104)	PP_3817/PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
*	?	NC_002947	4347932 =	NA (NA)	15 (0.210)	8/238	NT	NA	coding (748/1422 nt)	PP_3820	group II intron‑encoding maturase
	?	NC_002947	4392352 =	NA (NA)					coding (707/1422 nt)	PP_3868	group II intron‑encoding maturase
*	?	NC_002947	4350173 =	72 (0.990)	11 (0.170)	10/214	NT	15.8%	intergenic (‑181/+56)	galU/PP_3822	UTP‑glucose‑1‑phosphate uridylyltransferase/cytochrome c family protein
	?	NC_002947	4350224 =	55 (0.870)					intergenic (‑232/+5)	galU/PP_3822	UTP‑glucose‑1‑phosphate uridylyltransferase/cytochrome c family protein
*	?	NC_002947	4351452 =	67 (0.920)	5 (0.070)	3/236	NT	7.5%	coding (342/654 nt)	PP_3823	cytochrome c‑type protein
	?	NC_002947	4351479 =	60 (0.860)					coding (315/654 nt)	PP_3823	cytochrome c‑type protein
*	?	NC_002947	4363372 =	62 (0.850)	4 (0.060)	3/238	NT	6.6%	coding (414/1011 nt)	adhP	alcohol dehydrogenase
	?	NC_002947	4363401 =	53 (0.760)					coding (443/1011 nt)	adhP	alcohol dehydrogenase
*	?	NC_002947	= 4393957	91 (1.250)	6 (0.090)	6/232	NT	6.7%	coding (1059/1488 nt)	PP_3869	sheath protein
	?	NC_002947	= 4393980	82 (1.200)					coding (1036/1488 nt)	PP_3869	sheath protein
*	?	NC_002947	4401734 =	87 (1.190)	6 (0.090)	6/238	NT	7.0%	coding (1464/1809 nt)	PP_3881	terminase large subunit
	?	NC_002947	4401761 =	77 (1.100)					coding (1437/1809 nt)	PP_3881	terminase large subunit
*	?	NC_002947	= 4443120	64 (0.880)	7 (0.100)	6/238	NT	10.1%	coding (906/1314 nt)	nicT	metabolite transport protein NicT
	?	NC_002947	= 4443151	63 (0.900)					coding (875/1314 nt)	nicT	metabolite transport protein NicT
*	?	NC_002947	4527506 =	82 (1.120)	4 (0.060)	4/238	NT	5.3%	coding (508/1371 nt)	purB	adenylosuccinate lyase
	?	NC_002947	4527542 =	65 (0.930)					coding (544/1371 nt)	purB	adenylosuccinate lyase
*	?	NC_002947	4537593 =	NA (NA)	9 (0.130)	4/242	NT	69.8%	coding (884/1533 nt)	PP_4025	transposase
	?	NC_002947	= 4626705	4 (0.050)					coding (845/1533 nt)	PP_4091	transposase
*	?	NC_002947	= 4551237	72 (0.990)	7 (0.100)	7/234	NT	8.9%	coding (562/1275 nt)	pydA	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
	?	NC_002947	= 4551255	76 (1.100)					coding (580/1275 nt)	pydA	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
*	?	NC_002947	= 4552017	25 (0.340)	4 (0.070)	4/182	NT	13.1%	intergenic (+67/+114)	pydA/rutR	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA/transcriptional regulator, TetR family
	?	NC_002947	= 4552068	35 (0.660)					intergenic (+118/+63)	pydA/rutR	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA/transcriptional regulator, TetR family
*	?	NC_002947	4577844 =	92 (1.260)	10 (0.140)	5/238	NT	9.9%	intergenic (+9/+100)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
	?	NC_002947	4577929 =	93 (1.330)					intergenic (+94/+15)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
*	?	NC_002947	4586063 =	18 (0.250)	6 (0.120)	6/172	NT	28.3%	intergenic (+102/+115)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	4586167 =	18 (0.360)					intergenic (+206/+11)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	= 4586100	17 (0.230)	13 (0.260)	9/172	NT	46.6%	intergenic (+139/+78)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	= 4586128	18 (0.360)					intergenic (+167/+50)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	4591455 =	92 (1.260)	5 (0.070)	5/240	NT	5.6%	coding (480/816 nt)	liuC	methylglutaconyl‑CoA hydratase
	?	NC_002947	4591508 =	81 (1.150)					coding (533/816 nt)	liuC	methylglutaconyl‑CoA hydratase
*	?	NC_002947	4591518 =	80 (1.100)	6 (0.090)	5/232	NT	8.2%	coding (543/816 nt)	liuC	methylglutaconyl‑CoA hydratase
	?	NC_002947	4591543 =	60 (0.880)					coding (568/816 nt)	liuC	methylglutaconyl‑CoA hydratase
*	?	NC_002947	4611098 =	76 (1.040)	4 (0.060)	6/234	NT	5.4%	intergenic (+14/‑2093)	hcpC‑II/PP_4084	hemolysin‑coregulated protein/hypothetical protein
	?	NC_002947	4611123 =	68 (0.990)					intergenic (+39/‑2068)	hcpC‑II/PP_4084	hemolysin‑coregulated protein/hypothetical protein
*	?	NC_002947	= 4617159	61 (0.840)	4 (0.060)	4/238	NT	6.1%	coding (3484/4593 nt)	PP_4085	rhs family protein
	?	NC_002947	= 4617172	65 (0.930)					coding (3497/4593 nt)	PP_4085	rhs family protein
*	?	NC_002947	= 4632450	84 (1.150)	5 (0.070)	5/238	NT	6.2%	intergenic (+9/+150)	PP_4096/PP_t59	hypothetical protein/tRNA‑Gly
	?	NC_002947	= 4632462	71 (1.010)					intergenic (+21/+138)	PP_4096/PP_t59	hypothetical protein/tRNA‑Gly
*	?	NC_002947	= 4643020	63 (0.860)	4 (0.060)	4/230	NT	5.8%	intergenic (+20/‑160)	PP_4107/PP_4108	LysR family transcriptional regulator/4‑aminobutyrate aminotransferase
	?	NC_002947	= 4643043	72 (1.060)					intergenic (+43/‑137)	PP_4107/PP_4108	LysR family transcriptional regulator/4‑aminobutyrate aminotransferase
*	?	NC_002947	4647603 =	13 (0.180)	7 (0.140)	6/170	NT	31.2%	intergenic (+10/+121)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	4647711 =	22 (0.440)					intergenic (+118/+13)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	= 4647641	14 (0.190)	5 (0.100)	4/170	NT	24.1%	intergenic (+48/+83)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	= 4647671	22 (0.440)					intergenic (+78/+53)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	= 4675379	59 (0.810)	8 (0.130)	5/202	NT	12.2%	intergenic (+32/+72)	PP_4137/chrR	outer membrane siderophore receptor/chromate reductase
	?	NC_002947	= 4675391	67 (1.130)					intergenic (+44/+60)	PP_4137/chrR	outer membrane siderophore receptor/chromate reductase
*	?	NC_002947	4675529 =	69 (0.950)	4 (0.060)	4/234	NT	5.8%	coding (483/561 nt)	chrR	chromate reductase
	?	NC_002947	4675557 =	64 (0.930)					coding (455/561 nt)	chrR	chromate reductase
*	?	NC_002947	= 4682567	66 (0.900)	5 (0.070)	4/232	NT	7.2%	coding (811/1431 nt)	mltD	membrane‑bound lytic murein transglycosylase D
	?	NC_002947	= 4682588	68 (1.000)					coding (832/1431 nt)	mltD	membrane‑bound lytic murein transglycosylase D
*	?	NC_002947	4683545 =	71 (0.970)	4 (0.060)	4/234	NT	5.9%	coding (138/1830 nt)	PP_4146	peptide ABC transporter substrate‑binding protein
	?	NC_002947	4683577 =	60 (0.870)					coding (170/1830 nt)	PP_4146	peptide ABC transporter substrate‑binding protein
*	?	NC_002947	= 4700803	77 (1.050)	8 (0.120)	6/220	NT	9.1%	intergenic (‑70/+80)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
	?	NC_002947	= 4700847	92 (1.420)					intergenic (‑114/+36)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
*	?	NC_002947	4711855 =	58 (0.790)	4 (0.060)	6/232	NT	7.1%	coding (41/2115 nt)	PP_4171	hypothetical protein
	?	NC_002947	4711877 =	50 (0.730)					coding (63/2115 nt)	PP_4171	hypothetical protein
*	?	NC_002947	= 4714013	52 (0.710)	4 (0.060)	4/236	NT	7.5%	coding (85/891 nt)	PP_4172	hypothetical protein
	?	NC_002947	= 4714018	49 (0.710)					coding (90/891 nt)	PP_4172	hypothetical protein
*	?	NC_002947	4714580 =	84 (1.150)	5 (0.070)	5/240	NT	6.0%	coding (652/891 nt)	PP_4172	hypothetical protein
	?	NC_002947	4714619 =	75 (1.060)					coding (691/891 nt)	PP_4172	hypothetical protein
*	?	NC_002947	= 4757816	65 (0.890)	4 (0.060)	4/238	NT	6.0%	coding (1044/1413 nt)	ompQ	outer membrane pyoverdine efflux protein
	?	NC_002947	= 4757858	63 (0.900)					coding (1086/1413 nt)	ompQ	outer membrane pyoverdine efflux protein
*	?	NC_002947	= 4770306	50 (0.680)	4 (0.060)	4/238	NT	7.0%	coding (9006/10413 nt)	pvdD	non‑ribosomal peptide synthetase
	?	NC_002947	= 4770329	58 (0.830)					coding (8983/10413 nt)	pvdD	non‑ribosomal peptide synthetase
*	?	NC_002947	= 4785813	60 (0.820)	4 (0.060)	4/242	NT	6.0%	coding (1546/7887 nt)	pvdJ	non‑ribosomal peptide synthetase
	?	NC_002947	= 4785843	67 (0.940)					coding (1516/7887 nt)	pvdJ	non‑ribosomal peptide synthetase
*	?	NC_002947	4787419 =	110 (1.510)	6 (0.090)	6/236	NT	5.4%	coding (6466/6525 nt)	pvdI	non‑ribosomal peptide synthetase
	?	NC_002947	4787458 =	105 (1.510)					coding (6427/6525 nt)	pvdI	non‑ribosomal peptide synthetase
*	?	NC_002947	= 4789078	97 (1.330)	6 (0.090)	6/238	NT	5.9%	coding (4807/6525 nt)	pvdI	non‑ribosomal peptide synthetase
	?	NC_002947	= 4789101	99 (1.410)					coding (4784/6525 nt)	pvdI	non‑ribosomal peptide synthetase
*	?	NC_002947	4808219 =	0 (0.000)	34 (0.650)	23/178	NT	61.3%	intergenic (‑283/‑272)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	= 5988991	43 (0.820)					intergenic (+229/‑317)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	4810570 =	79 (1.080)	5 (0.070)	5/238	NT	6.2%	coding (365/837 nt)	PP_4236	thiol:disulfide interchange protein DsbE
	?	NC_002947	4810589 =	75 (1.070)					coding (384/837 nt)	PP_4236	thiol:disulfide interchange protein DsbE
*	?	NC_002947	= 4811898	47 (0.640)	6 (0.090)	6/218	NT	10.0%	coding (97/324 nt)	PP_4238	hypothetical protein
	?	NC_002947	= 4811958	67 (1.050)					coding (157/324 nt)	PP_4238	hypothetical protein
*	?	NC_002947	4817645 =	71 (0.970)	4 (0.060)	4/234	NT	5.7%	coding (296/795 nt)	PP_4242	conserved protein of unknown function with Rhs repeat‑associated core domain
	?	NC_002947	4817675 =	66 (0.960)					coding (326/795 nt)	PP_4242	conserved protein of unknown function with Rhs repeat‑associated core domain
*	?	NC_002947	= 4825634	62 (0.850)	6 (0.090)	6/236	NT	8.8%	coding (5601/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	= 4825641	65 (0.940)					coding (5594/12954 nt)	pvdL	non‑ribosomal peptide synthetase
*	?	NC_002947	= 4826126	70 (0.960)	8 (0.110)	7/242	NT	9.8%	coding (5109/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	= 4826147	79 (1.110)					coding (5088/12954 nt)	pvdL	non‑ribosomal peptide synthetase
*	?	NC_002947	4832376 =	63 (0.860)	5 (0.070)	5/236	NT	8.3%	coding (860/1014 nt)	pvdY	hydroxyproline acetylase
	?	NC_002947	4832395 =	51 (0.730)					coding (841/1014 nt)	pvdY	hydroxyproline acetylase
*	?	NC_002947	4832785 =	90 (1.230)	6 (0.080)	6/242	NT	6.1%	coding (451/1014 nt)	pvdY	hydroxyproline acetylase
	?	NC_002947	4832812 =	96 (1.350)					coding (424/1014 nt)	pvdY	hydroxyproline acetylase
*	?	NC_002947	4845374 =	99 (1.360)	6 (0.090)	6/238	NT	6.1%	coding (79/2475 nt)	PP_4261	cation‑transporting P‑type ATPase
	?	NC_002947	4845403 =	91 (1.300)					coding (108/2475 nt)	PP_4261	cation‑transporting P‑type ATPase
*	?	NC_002947	= 4861197	82 (1.120)	12 (0.210)	10/198	NT	14.0%	intergenic (‑103/+134)	ligA/PP_4275	DNA ligase/cell division protein ZipA
	?	NC_002947	= 4861238	82 (1.410)					intergenic (‑144/+93)	ligA/PP_4275	DNA ligase/cell division protein ZipA
*	?	NC_002947	4870711 =	64 (0.880)	10 (0.170)	9/198	NT	16.0%	intergenic (+16/‑104)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
	?	NC_002947	4870781 =	54 (0.930)					intergenic (+86/‑34)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
*	?	NC_002947	= 4870735	70 (0.960)	8 (0.140)	8/198	NT	12.7%	intergenic (+40/‑80)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
	?	NC_002947	= 4870755	54 (0.930)					intergenic (+60/‑60)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
*	?	NC_002947	= 4876493	140 (1.920)	14 (0.210)	9/222	NT	10.4%	intergenic (+286/+151)	PP_4284/pucM	transporter/5‑hydroxyisourate hydrolase
	?	NC_002947	= 4876523	116 (1.780)					intergenic (+316/+121)	PP_4284/pucM	transporter/5‑hydroxyisourate hydrolase
*	?	NC_002947	= 4889640	57 (0.780)	5 (0.090)	5/194	NT	8.8%	intergenic (+41/‑112)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
	?	NC_002947	= 4889677	59 (1.040)					intergenic (+78/‑75)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
*	?	NC_002947	= 4890813	77 (1.050)	6 (0.090)	6/230	NT	7.9%	intergenic (+168/‑71)	glxR/ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
	?	NC_002947	= 4890835	69 (1.020)					intergenic (+190/‑49)	glxR/ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
*	?	NC_002947	= 4893624	111 (1.520)	6 (0.110)	3/194	NT	6.1%	intergenic (+54/‑154)	pyk/PP_4302	pyruvate kinase/urea transporter
	?	NC_002947	= 4893649	99 (1.740)					intergenic (+79/‑129)	pyk/PP_4302	pyruvate kinase/urea transporter
*	?	NC_002947	4898121 =	55 (0.750)	3 (0.040)	3/238	NT	5.1%	coding (468/957 nt)	PP_4306	hypothetical protein
	?	NC_002947	4898167 =	60 (0.860)					coding (422/957 nt)	PP_4306	hypothetical protein
*	?	NC_002947	= 4931718	56 (0.770)	4 (0.060)	4/234	NT	6.7%	coding (545/741 nt)	fliA	RNA polymerase sigma 28 factor
	?	NC_002947	= 4931729	58 (0.840)					coding (534/741 nt)	fliA	RNA polymerase sigma 28 factor
*	?	NC_002947	4933218 =	59 (0.810)	4 (0.060)	4/234	NT	6.3%	coding (1276/1308 nt)	flhF	flagellar biosynthesis protein FlhF
	?	NC_002947	4933250 =	63 (0.920)					coding (1244/1308 nt)	flhF	flagellar biosynthesis protein FlhF
*	?	NC_002947	4933279 =	63 (0.860)	4 (0.060)	4/238	NT	6.8%	coding (1215/1308 nt)	flhF	flagellar biosynthesis protein FlhF
	?	NC_002947	4933306 =	49 (0.700)					coding (1188/1308 nt)	flhF	flagellar biosynthesis protein FlhF
*	?	NC_002947	= 4957617	80 (1.100)	9 (0.140)	8/218	NT	10.0%	intergenic (‑55/+108)	fliH/fliG	flagellar assembly protein FliH/flagellar motor switch protein
	?	NC_002947	= 4957677	92 (1.440)					intergenic (‑115/+48)	fliH/fliG	flagellar assembly protein FliH/flagellar motor switch protein
*	?	NC_002947	= 4988169	63 (0.860)	4 (0.060)	4/240	NT	6.6%	coding (535/744 nt)	ycgR	flagellar brake protein YcgR
	?	NC_002947	= 4988204	53 (0.750)					coding (570/744 nt)	ycgR	flagellar brake protein YcgR
*	?	NC_002947	= 4990744	88 (1.210)	6 (0.080)	6/244	NT	6.0%	coding (436/1242 nt)	PP_4399	glutamine synthetase
	?	NC_002947	= 4990763	101 (1.410)					coding (417/1242 nt)	PP_4399	glutamine synthetase
*	?	NC_002947	5012291 =	72 (0.990)	4 (0.060)	3/230	NT	5.9%	coding (166/402 nt)	PP_5676	hypothetical protein
	?	NC_002947	5012380 =	61 (0.900)					coding (77/402 nt)	PP_5676	hypothetical protein
*	?	NC_002947	= 5036230	28 (0.380)	6 (0.080)	6/242	NT	12.5%	intergenic (+686/‑11)	PP_4439/PP_4441	transposase/transposase
	?	NC_002947	6155313 =	57 (0.800)					intergenic (‑67/+139)	PP_5398/PP_5399	transposase/hypothetical protein
*	?	NC_002947	= 5050841	34 (0.470)	3 (0.040)	3/238	NT	6.8%	coding (268/645 nt)	PP_5687	MFS transporter
	?	NC_002947	= 5050869	50 (0.710)					coding (240/645 nt)	PP_5687	MFS transporter
*	?	NC_002947	5061570 =	70 (0.960)	4 (0.060)	4/238	NT	6.1%	coding (199/1098 nt)	PP_4459	transposase
	?	NC_002947	5061594 =	56 (0.800)					coding (223/1098 nt)	PP_4459	transposase
*	?	NC_002947	5077327 =	72 (0.990)	7 (0.100)	6/236	NT	9.8%	intergenic (+74/+34)	PP_4470/mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
	?	NC_002947	5077353 =	60 (0.860)					intergenic (+100/+8)	PP_4470/mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
*	?	NC_002947	= 5095534	76 (1.040)	5 (0.070)	5/238	NT	6.4%	coding (406/690 nt)	hisQ	histidine/lysine/arginine/ornithine ABC transporter permease
	?	NC_002947	= 5095549	73 (1.040)					coding (391/690 nt)	hisQ	histidine/lysine/arginine/ornithine ABC transporter permease
*	?	NC_002947	5111564 =	82 (1.120)	4 (0.060)	4/234	NT	5.1%	coding (896/1068 nt)	rluB	23S rRNA pseudouridylate synthase B
	?	NC_002947	5111604 =	71 (1.030)					coding (856/1068 nt)	rluB	23S rRNA pseudouridylate synthase B
*	?	NC_002947	5112607 =	89 (1.220)	6 (0.100)	6/204	NT	10.2%	intergenic (‑148/+118)	rluB/PP_4497	23S rRNA pseudouridylate synthase B/hypothetical protein
	?	NC_002947	5112712 =	32 (0.530)					intergenic (‑253/+13)	rluB/PP_4497	23S rRNA pseudouridylate synthase B/hypothetical protein
*	?	NC_002947	5125125 =	98 (1.340)	8 (0.120)	7/230	NT	7.0%	intergenic (+51/‑131)	PP_4511/PP_4512	AraC family transcriptional regulator/DMT superfamily permease
	?	NC_002947	5125224 =	122 (1.800)					intergenic (+150/‑32)	PP_4511/PP_4512	AraC family transcriptional regulator/DMT superfamily permease
*	?	NC_002947	= 5133646	54 (0.740)	3 (0.040)	3/240	NT	5.2%	coding (680/1359 nt)	tolC	agglutination protein
	?	NC_002947	= 5133696	58 (0.820)					coding (730/1359 nt)	tolC	agglutination protein
*	?	NC_002947	5140340 =	82 (1.120)	4 (0.060)	3/234	NT	5.1%	intergenic (+4/+376)	PP_4524/PP_4525	sodium‑solute symporter/LysR family transcriptional regulator
	?	NC_002947	5140396 =	71 (1.030)					intergenic (+60/+320)	PP_4524/PP_4525	sodium‑solute symporter/LysR family transcriptional regulator
*	?	NC_002947	5162550 =	62 (0.850)	10 (0.160)	9/216	NT	17.3%	intergenic (+25/+176)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	5162590 =	42 (0.660)					intergenic (+65/+136)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
*	?	NC_002947	5162618 =	48 (0.660)	10 (0.170)	9/196	NT	20.2%	intergenic (+93/+108)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	5162702 =	41 (0.710)					intergenic (+177/+24)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
*	?	NC_002947	= 5162643	48 (0.660)	10 (0.170)	9/196	NT	20.2%	intergenic (+118/+83)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	= 5162675	41 (0.710)					intergenic (+150/+51)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
*	?	NC_002947	= 5169403	93 (1.270)	8 (0.120)	8/236	NT	8.3%	coding (973/1365 nt)	PP_4547	glutamine synthetase
	?	NC_002947	= 5169415	88 (1.270)					coding (985/1365 nt)	PP_4547	glutamine synthetase
*	?	NC_002947	= 5170404	52 (0.710)	5 (0.070)	5/232	NT	7.8%	coding (585/1308 nt)	PP_4548	oxidoreductase
	?	NC_002947	= 5170444	70 (1.030)					coding (625/1308 nt)	PP_4548	oxidoreductase
*	?	NC_002947	5192772 =	57 (0.780)	14 (0.240)	8/198	NT	27.6%	intergenic (+105/‑97)	PP_4572/PP_4573	hypothetical protein/AAA family ATPase
	?	NC_002947	5192841 =	28 (0.480)					intergenic (+174/‑28)	PP_4572/PP_4573	hypothetical protein/AAA family ATPase
*	?	NC_002947	5207233 =	77 (1.050)	4 (0.060)	4/238	NT	5.1%	coding (117/594 nt)	PP_4588	nitroreductase family oxidoreductase
	?	NC_002947	5207258 =	75 (1.070)					coding (142/594 nt)	PP_4588	nitroreductase family oxidoreductase
*	?	NC_002947	5237563 =	91 (1.250)	4 (0.060)	4/230	NT	5.1%	coding (346/348 nt)	PP_5700	hypothetical protein
	?	NC_002947	5237620 =	64 (0.950)					coding (32/387 nt)	PP_4614	hypothetical protein
*	?	NC_002947	5257905 =	71 (0.970)	20 (0.310)	11/220	NT	23.1%	intergenic (‑56/+88)	PP_4634/PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
	?	NC_002947	5257976 =	70 (1.080)					intergenic (‑127/+17)	PP_4634/PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
*	?	NC_002947	5288442 =	41 (0.560)	4 (0.070)	4/188	NT	11.1%	intergenic (‑75/+109)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
	?	NC_002947	5288536 =	33 (0.600)					intergenic (‑169/+15)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
*	?	NC_002947	= 5288471	41 (0.560)	6 (0.110)	5/188	NT	15.8%	intergenic (‑104/+80)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
	?	NC_002947	= 5288505	33 (0.600)					intergenic (‑138/+46)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
*	?	NC_002947	= 5292940	69 (0.950)	4 (0.060)	4/236	NT	5.2%	coding (1495/1527 nt)	mmsA‑II	methylmalonate‑semialdehyde dehydrogenase
	?	NC_002947	= 5292973	79 (1.140)					coding (1462/1527 nt)	mmsA‑II	methylmalonate‑semialdehyde dehydrogenase
*	?	NC_002947	5295539 =	71 (0.970)	4 (0.060)	4/228	NT	6.1%	intergenic (+22/+104)	PP_4668/PP_4669	LysR family transcriptional regulator/OmpA family protein
	?	NC_002947	5295617 =	57 (0.850)					intergenic (+100/+26)	PP_4668/PP_4669	LysR family transcriptional regulator/OmpA family protein
*	?	NC_002947	= 5296808	97 (1.330)	5 (0.070)	5/242	NT	5.1%	coding (603/1272 nt)	TpbB	diguanylate cyclase
	?	NC_002947	= 5296852	93 (1.310)					coding (559/1272 nt)	TpbB	diguanylate cyclase
*	?	NC_002947	= 5336775	71 (0.970)	4 (0.060)	4/240	NT	5.4%	coding (177/1443 nt)	PP_4696	nitrogen regulation protein NR(I)
	?	NC_002947	= 5336801	72 (1.020)					coding (203/1443 nt)	PP_4696	nitrogen regulation protein NR(I)
*	?	NC_002947	= 5350523	60 (0.820)	6 (0.080)	6/240	NT	9.0%	intergenic (+12/+70)	PP_4704/PP_4705	hypothetical protein/glyoxalase
	?	NC_002947	= 5350566	64 (0.910)					intergenic (+55/+27)	PP_4704/PP_4705	hypothetical protein/glyoxalase
*	?	NC_002947	= 5356233	46 (0.630)	5 (0.070)	5/232	NT	9.9%	intergenic (‑82/+35)	rbfA/infB	ribosome‑binding factor A/translation initiation factor IF‑2
	?	NC_002947	= 5356248	48 (0.700)					intergenic (‑97/+20)	rbfA/infB	ribosome‑binding factor A/translation initiation factor IF‑2
*	?	NC_002947	= 5364465	74 (1.010)	4 (0.060)	6/234	NT	5.3%	coding (217/852 nt)	folP	dihydropteroate synthase
	?	NC_002947	= 5364471	72 (1.050)					coding (211/852 nt)	folP	dihydropteroate synthase
*	?	NC_002947	5382446 =	57 (0.780)	6 (0.110)	6/178	NT	18.5%	intergenic (+18/+115)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
	?	NC_002947	5382544 =	12 (0.230)					intergenic (+116/+17)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
*	?	NC_002947	5405650 =	69 (0.950)	6 (0.080)	6/240	NT	8.3%	coding (368/660 nt)	PP_4749	amino acid ABC transporter permease
	?	NC_002947	5405682 =	66 (0.930)					coding (336/660 nt)	PP_4749	amino acid ABC transporter permease
*	?	NC_002947	5426045 =	60 (0.820)	4 (0.060)	4/236	NT	6.4%	coding (533/1239 nt)	PP_4765	hypothetical protein
	?	NC_002947	5426081 =	59 (0.850)					coding (569/1239 nt)	PP_4765	hypothetical protein
*	?	NC_002947	5426181 =	70 (0.960)	4 (0.060)	4/240	NT	5.1%	coding (669/1239 nt)	PP_4765	hypothetical protein
	?	NC_002947	5426230 =	82 (1.160)					coding (718/1239 nt)	PP_4765	hypothetical protein
*	?	NC_002947	= 5431871	84 (1.150)	5 (0.070)	5/232	NT	5.6%	coding (419/657 nt)	PP_4771	membrane protein
	?	NC_002947	= 5431899	90 (1.320)					coding (447/657 nt)	PP_4771	membrane protein
*	?	NC_002947	= 5441549	79 (1.080)	8 (0.110)	6/238	NT	9.6%	coding (1083/1653 nt)	PP_4780	acyl‑CoA dehydrogenase
	?	NC_002947	= 5441562	75 (1.070)					coding (1070/1653 nt)	PP_4780	acyl‑CoA dehydrogenase
*	?	NC_002947	= 5463197	59 (0.810)	5 (0.080)	5/226	NT	7.6%	coding (201/939 nt)	PP_4799	muramoyltetrapeptide carboxypeptidase
	?	NC_002947	= 5463225	68 (1.020)					coding (173/939 nt)	PP_4799	muramoyltetrapeptide carboxypeptidase
*	?	NC_002947	5474992 =	75 (1.030)	5 (0.070)	4/230	NT	7.1%	intergenic (‑150/‑156)	proA/PP_4812	gamma‑glutamyl phosphate reductase/3‑methyladenine DNA glycosylase
	?	NC_002947	5475062 =	62 (0.920)					intergenic (‑220/‑86)	proA/PP_4812	gamma‑glutamyl phosphate reductase/3‑methyladenine DNA glycosylase
*	?	NC_002947	5485172 =	99 (1.360)	9 (0.160)	8/196	NT	11.0%	intergenic (+30/‑117)	purH/purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
	?	NC_002947	5485246 =	67 (1.160)					intergenic (+104/‑43)	purH/purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
*	?	NC_002947	= 5489667	68 (0.930)	6 (0.090)	6/238	NT	8.4%	coding (101/597 nt)	PP_4825	MarC family membrane protein
	?	NC_002947	= 5489688	66 (0.940)					coding (122/597 nt)	PP_4825	MarC family membrane protein
*	?	NC_002947	5513290 =	102 (1.400)	4 (0.070)	4/196	NT	5.3%	intergenic (+20/‑134)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
	?	NC_002947	5513398 =	62 (1.080)					intergenic (+128/‑26)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
*	?	NC_002947	5518985 =	88 (1.210)	6 (0.090)	5/236	NT	7.2%	intergenic (‑27/+4)	PP_4851/PP_4852	phosphate starvation‑inducible protein PsiF/AraC family transcriptional regulator
	?	NC_002947	5519055 =	72 (1.040)					coding (723/789 nt)	PP_4852	AraC family transcriptional regulator
*	?	NC_002947	5527455 =	77 (1.050)	7 (0.100)	7/236	NT	8.8%	coding (920/1134 nt)	PP_4860	mannose‑6‑phosphate isomerase
	?	NC_002947	5527474 =	71 (1.020)					coding (939/1134 nt)	PP_4860	mannose‑6‑phosphate isomerase
*	?	NC_002947	5536020 =	76 (1.040)	4 (0.060)	6/234	NT	5.2%	coding (989/1209 nt)	pncB	nicotinate phosphoribosyltransferase
	?	NC_002947	5536037 =	74 (1.070)					coding (1006/1209 nt)	pncB	nicotinate phosphoribosyltransferase
*	?	NC_002947	= 5537105	90 (1.230)	16 (0.280)	11/194	NT	18.2%	intergenic (+34/+69)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
	?	NC_002947	= 5537127	74 (1.300)					intergenic (+56/+47)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
*	?	NC_002947	= 5584576	49 (0.670)	3 (0.040)	3/234	NT	5.3%	coding (1207/2259 nt)	parC	DNA topoisomerase IV subunit A
	?	NC_002947	= 5584609	61 (0.890)					coding (1174/2259 nt)	parC	DNA topoisomerase IV subunit A
*	?	NC_002947	= 5599566	79 (1.080)	5 (0.070)	5/236	NT	6.4%	coding (3967/5418 nt)	PP_4924	subtilase family serine protease
	?	NC_002947	= 5599598	72 (1.040)					coding (3935/5418 nt)	PP_4924	subtilase family serine protease
*	?	NC_002947	= 5611616	58 (0.790)	3 (0.040)	3/230	NT	5.4%	coding (559/1176 nt)	PP_4931	hypothetical protein
	?	NC_002947	= 5611650	52 (0.770)					coding (593/1176 nt)	PP_4931	hypothetical protein
*	?	NC_002947	= 5611672	73 (1.000)	4 (0.060)	4/236	NT	5.5%	coding (615/1176 nt)	PP_4931	hypothetical protein
	?	NC_002947	= 5611698	69 (0.990)					coding (641/1176 nt)	PP_4931	hypothetical protein
*	?	NC_002947	= 5612940	71 (0.970)	4 (0.060)	4/236	NT	5.5%	coding (711/813 nt)	PP_4932	D‑arabinose 1‑dehydrogenase
	?	NC_002947	= 5612957	71 (1.020)					coding (728/813 nt)	PP_4932	D‑arabinose 1‑dehydrogenase
*	?	NC_002947	5652763 =	103 (1.410)	6 (0.080)	6/242	NT	5.4%	coding (188/330 nt)	PP_4961	lipoprotein
	?	NC_002947	5652800 =	111 (1.560)					coding (151/330 nt)	PP_4961	lipoprotein
*	?	NC_002947	= 5661091	75 (1.030)	4 (0.060)	4/228	NT	5.5%	coding (665/1701 nt)	ligB	DNA ligase B
	?	NC_002947	= 5661120	69 (1.030)					coding (694/1701 nt)	ligB	DNA ligase B
*	?	NC_002947	5671666 =	34 (0.470)	11 (0.190)	9/200	NT	26.1%	intergenic (+34/‑136)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	5671751 =	35 (0.600)					intergenic (+119/‑51)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	= 5671689	33 (0.450)	4 (0.070)	4/200	NT	11.5%	intergenic (+57/‑113)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	= 5671726	35 (0.600)					intergenic (+94/‑76)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	5681397 =	63 (0.860)	3 (0.050)	3/202	NT	5.6%	intergenic (‑63/+145)	PP_4986/PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
	?	NC_002947	5681512 =	50 (0.840)					intergenic (‑178/+30)	PP_4986/PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
*	?	NC_002947	5681774 =	78 (1.070)	5 (0.070)	5/240	NT	6.2%	coding (242/474 nt)	PP_4987	putative Chemotaxis protein
	?	NC_002947	5681819 =	77 (1.090)					coding (197/474 nt)	PP_4987	putative Chemotaxis protein
*	?	NC_002947	= 5681938	54 (0.740)	4 (0.060)	4/232	NT	7.5%	coding (78/474 nt)	PP_4987	putative Chemotaxis protein
	?	NC_002947	= 5681955	48 (0.700)					coding (61/474 nt)	PP_4987	putative Chemotaxis protein
*	?	NC_002947	= 5718252	90 (1.230)	7 (0.100)	6/236	NT	7.4%	coding (895/1917 nt)	PP_5020	methyl‑accepting chemotaxis protein
	?	NC_002947	= 5718270	89 (1.280)					coding (913/1917 nt)	PP_5020	methyl‑accepting chemotaxis protein
*	?	NC_002947	= 5734113	103 (1.410)	10 (0.160)	9/218	NT	9.4%	intergenic (‑83/+74)	proY/hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
	?	NC_002947	= 5734136	103 (1.610)					intergenic (‑106/+51)	proY/hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
*	?	NC_002947	5743392 =	89 (1.220)	11 (0.170)	9/222	NT	12.7%	intergenic (‑169/+78)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
	?	NC_002947	5743446 =	72 (1.100)					intergenic (‑223/+24)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
*	?	NC_002947	= 5745199	80 (1.100)	4 (0.060)	4/234	NT	5.2%	coding (722/2451 nt)	glgP	glycogen phosphorylase
	?	NC_002947	= 5745229	71 (1.030)					coding (692/2451 nt)	glgP	glycogen phosphorylase
*	?	NC_002947	= 5754794	67 (0.920)	6 (0.080)	6/240	NT	8.4%	coding (934/1086 nt)	glnL	two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
	?	NC_002947	= 5754830	66 (0.930)					coding (970/1086 nt)	glnL	two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
*	?	NC_002947	= 5759491	74 (1.010)	6 (0.110)	6/184	NT	8.6%	intergenic (+44/+112)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
	?	NC_002947	= 5759519	73 (1.350)					intergenic (+72/+84)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
*	?	NC_002947	5765435 =	92 (1.260)	5 (0.070)	5/234	NT	5.5%	coding (35/768 nt)	PP_5059	hypothetical protein
	?	NC_002947	5765465 =	84 (1.220)					coding (65/768 nt)	PP_5059	hypothetical protein
*	?	NC_002947	5786528 =	92 (1.260)	6 (0.100)	5/200	NT	7.5%	intergenic (+15/‑116)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	5786613 =	73 (1.240)					intergenic (+100/‑31)	PP_5068/trxC	hypothetical protein/thioredoxin
*	?	NC_002947	= 5796767	72 (0.990)	6 (0.090)	6/236	NT	7.8%	coding (1189/4446 nt)	gltB	L‑glutamate synthase subunit alpha
	?	NC_002947	= 5796785	74 (1.070)					coding (1171/4446 nt)	gltB	L‑glutamate synthase subunit alpha
*	?	NC_002947	5810279 =	73 (1.000)	9 (0.130)	8/236	NT	11.9%	coding (11/768 nt)	PP_5086	nuclease
	?	NC_002947	5810302 =	64 (0.920)					intergenic (‑13/+44)	PP_5086/rpmE	nuclease/50S ribosomal protein L31
*	?	NC_002947	5826466 =	52 (0.710)	6 (0.090)	6/236	NT	11.0%	coding (218/279 nt)	PP_5105	sulfur carrier protein ThiS
	?	NC_002947	5826488 =	48 (0.690)					coding (196/279 nt)	PP_5105	sulfur carrier protein ThiS
*	?	NC_002947	5841887 =	83 (1.140)	5 (0.070)	5/242	NT	5.6%	coding (400/1431 nt)	calB	coniferyl aldehyde dehydrogenase
	?	NC_002947	5841923 =	88 (1.240)					coding (436/1431 nt)	calB	coniferyl aldehyde dehydrogenase
*	?	NC_002947	= 5856331	73 (1.000)	6 (0.090)	6/230	NT	8.1%	coding (202/1392 nt)	PP_5133	membrane protein
	?	NC_002947	= 5856341	69 (1.020)					coding (212/1392 nt)	PP_5133	membrane protein
*	?	NC_002947	= 5862975	75 (1.030)	4 (0.060)	4/228	NT	5.4%	intergenic (‑131/+100)	fbpC/PP_5138	ABC transporter ATP‑binding protein/LysR family transcriptional regulator
	?	NC_002947	= 5863049	72 (1.070)					intergenic (‑205/+26)	fbpC/PP_5138	ABC transporter ATP‑binding protein/LysR family transcriptional regulator
*	?	NC_002947	5877040 =	85 (1.160)	4 (0.070)	3/200	NT	5.7%	intergenic (+6/+99)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
	?	NC_002947	5877122 =	65 (1.110)					intergenic (+88/+17)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
*	?	NC_002947	= 5877063	82 (1.120)	4 (0.070)	4/200	NT	5.8%	intergenic (+29/+76)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
	?	NC_002947	= 5877097	65 (1.110)					intergenic (+63/+42)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
*	?	NC_002947	= 5888777	86 (1.180)	7 (0.100)	6/238	NT	8.0%	coding (376/2367 nt)	PP_5164	penicillin amidase family protein
	?	NC_002947	= 5888793	79 (1.130)					coding (392/2367 nt)	PP_5164	penicillin amidase family protein
*	?	NC_002947	5903827 =	59 (0.810)	21 (0.330)	15/216	NT	28.3%	intergenic (+27/+80)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	5903887 =	55 (0.870)					intergenic (+87/+20)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	= 5903842	55 (0.750)	3 (0.050)	3/216	NT	5.5%	intergenic (+42/+65)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	= 5903870	55 (0.870)					intergenic (+70/+37)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	5914213 =	36 (0.490)	3 (0.050)	3/192	NT	8.7%	intergenic (+49/+104)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	5914309 =	35 (0.620)					intergenic (+145/+8)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5914240	37 (0.510)	5 (0.090)	5/192	NT	13.6%	intergenic (+76/+77)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	= 5914280	35 (0.620)					intergenic (+116/+37)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5918398	80 (1.100)	5 (0.080)	4/214	NT	5.6%	intergenic (+32/+63)	ygiF/PP_5188	thiamine triphosphatase/AsnC/Lrp family transcriptional regulator
	?	NC_002947	= 5918438	99 (1.570)					intergenic (+72/+23)	ygiF/PP_5188	thiamine triphosphatase/AsnC/Lrp family transcriptional regulator
*	?	NC_002947	= 5926884	89 (1.220)	5 (0.070)	5/232	NT	5.7%	coding (1067/1623 nt)	PP_5195	iron ABC transporter permease
	?	NC_002947	= 5926906	83 (1.220)					coding (1045/1623 nt)	PP_5195	iron ABC transporter permease
*	?	NC_002947	5929940 =	76 (1.040)	4 (0.060)	4/232	NT	5.8%	coding (504/1224 nt)	visC	ubiquinone biosynthesis oxidoreductase
	?	NC_002947	5929971 =	58 (0.850)					coding (473/1224 nt)	visC	ubiquinone biosynthesis oxidoreductase
*	?	NC_002947	5940017 =	78 (1.070)	8 (0.110)	8/240	NT	9.9%	coding (2522/2721 nt)	rbbA	ribosome‑associated ATPase
	?	NC_002947	5940046 =	70 (0.990)					coding (2551/2721 nt)	rbbA	ribosome‑associated ATPase
*	?	NC_002947	5943657 =	101 (1.380)	5 (0.080)	5/204	NT	6.3%	intergenic (+9/+76)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein
	?	NC_002947	5943722 =	67 (1.120)					intergenic (+74/+11)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein
*	?	NC_002947	5971256 =	70 (0.960)	4 (0.060)	4/234	NT	5.9%	coding (94/2124 nt)	PP_5236	hypothetical protein
	?	NC_002947	5971282 =	61 (0.890)					coding (68/2124 nt)	PP_5236	hypothetical protein
*	?	NC_002947	6000959 =	80 (1.100)	5 (0.090)	5/188	NT	8.8%	intergenic (+10/+99)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
	?	NC_002947	6001053 =	43 (0.780)					intergenic (+104/+5)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
*	?	NC_002947	6002391 =	120 (1.640)	6 (0.090)	6/228	NT	5.8%	intergenic (‑35/+111)	amaA/amaB	L‑pipecolate oxidase/L‑piperidine‑6‑carboxylate dehydrogenase
	?	NC_002947	6002465 =	85 (1.270)					intergenic (‑109/+37)	amaA/amaB	L‑pipecolate oxidase/L‑piperidine‑6‑carboxylate dehydrogenase
*	?	NC_002947	= 6009197	27 (0.370)	15 (0.280)	16/182	NT	40.7%	intergenic (+38/+44)	norM/PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
	?	NC_002947	= 6009208	24 (0.450)					intergenic (+49/+33)	norM/PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
*	?	NC_002947	= 6055208	55 (0.750)	6 (0.090)	5/232	NT	9.2%	coding (105/732 nt)	tonB	TonB energy transducing system subunit TonB
	?	NC_002947	= 6055248	67 (0.980)					coding (145/732 nt)	tonB	TonB energy transducing system subunit TonB
*	?	NC_002947	6062575 =	74 (1.010)	4 (0.060)	4/240	NT	5.1%	coding (185/1149 nt)	alkT	rubredoxin‑NAD(+) reductase
	?	NC_002947	6062610 =	78 (1.100)					coding (150/1149 nt)	alkT	rubredoxin‑NAD(+) reductase
*	?	NC_002947	6076717 =	60 (0.820)	5 (0.080)	5/226	NT	9.2%	intergenic (‑100/+39)	PP_5328/PP_5329	phosphate ABC transporter permease/phosphate ABC transporter substrate‑binding protein
	?	NC_002947	6076748 =	44 (0.660)					intergenic (‑131/+8)	PP_5328/PP_5329	phosphate ABC transporter permease/phosphate ABC transporter substrate‑binding protein
*	?	NC_002947	6127506 =	71 (0.970)	4 (0.060)	4/234	NT	6.0%	coding (435/909 nt)	PP_5375	LysR family transcriptional regulator
	?	NC_002947	6127531 =	59 (0.860)					coding (410/909 nt)	PP_5375	LysR family transcriptional regulator
*	?	NC_002947	= 6140035	30 (0.410)	4 (0.060)	4/234	NT	12.4%	coding (1184/1473 nt)	cusB	CzcB family copper RND transporter membrane fusion protein
	?	NC_002947	= 6140040	28 (0.410)					coding (1189/1473 nt)	cusB	CzcB family copper RND transporter membrane fusion protein
*	?	NC_002947	= 6157884	54 (0.740)	4 (0.060)	4/234	NT	6.7%	coding (192/642 nt)	PP_5401	hypothetical protein
	?	NC_002947	= 6157896	61 (0.890)					coding (204/642 nt)	PP_5401	hypothetical protein
*	?	NC_002947	= 6158420	57 (0.780)	9 (0.130)	11/230	NT	14.8%	intergenic (+86/‑21)	PP_5401/PP_5739	hypothetical protein/hypothetical protein
	?	NC_002947	= 6158429	51 (0.750)					intergenic (+95/‑12)	PP_5401/PP_5739	hypothetical protein/hypothetical protein