New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 358171952 (0.710)5 (0.070) 5/230 NT 9.0% coding (772/942 nt) PP_3160 hypothetical protein
?NC_002947 = 3581735 53 (0.780)coding (788/942 nt) PP_3160 hypothetical protein

ACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGAAAAAGTACCGAACATCCGTAAA  >  NC_002947/3581589‑3581880
                                                                                                                                                  |                                                                                                                                                  
acacGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCccg                                                                                                                                                 <  1:1746096‑M2/150‑4 (MQ=255)
 cacGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCccgg                                                                                                                                                >  2:1875354‑M2/1‑146 (MQ=255)
   cGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCccggga                                                                                                                                              >  1:1901563‑M2/1‑144 (MQ=255)
      cAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCgcgggagac                                                                                                                                           <  1:921411‑M2/150‑10 (MQ=255)
         aaGAAACCAATCGTGGCACCCAAATGACGTAATCAGGCTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACAtt                                                                                                                                       >  1:460467/1‑150 (MQ=255)
          aGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTg                                                                                                                                      <  2:1417439/150‑1 (MQ=255)
           gAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGc                                                                                                                                     <  1:206451/150‑1 (MQ=255)
              aCCAATCGTGGCACCCAAATGACGTACAGAGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCagg                                                                                                                                  <  2:460467/150‑1 (MQ=255)
                 aaTCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCaggagg                                                                                                                               >  2:24028/1‑150 (MQ=255)
                       ggCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGCATCGTTTTATCCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTaa                                                                                                                         <  2:59229/150‑1 (MQ=255)
                          aCCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTaa                                                                                                                         <  1:388263/147‑1 (MQ=255)
                          aCCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTaa                                                                                                                         >  2:388263/1‑147 (MQ=255)
                              aaaTGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCaa                                                                                                                  >  2:1102323/1‑150 (MQ=255)
                               aaTGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCaaa                                                                                                                 <  1:24028/150‑1 (MQ=255)
                               aaTGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCaaa                                                                                                                 <  2:1746096/150‑1 (MQ=255)
                                      tACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATggg                                                                                                          <  1:780723/150‑1 (MQ=255)
                                          gCGACCAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGa                                                                                                      >  2:764123/1‑150 (MQ=255)
                                              cTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATggg                                                                                                          >  1:1032492/1‑142 (MQ=255)
                                              cTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATggg                                                                                                          <  2:1032492/142‑1 (MQ=255)
                                               tAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGac                                                                                                 >  2:287510/1‑150 (MQ=255)
                                                            tggctggTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGc                                                                                    >  1:343082/1‑150 (MQ=255)
                                                              gctggTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCt                                                                                      <  1:1435104/146‑1 (MQ=255)
                                                              gctggTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCt                                                                                      >  2:1435104/1‑146 (MQ=255)
                                                                tggTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATc                                                                                                                    <  2:1308220/114‑1 (MQ=255)
                                                                tggTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATc                                                                                                                    >  1:1308220/1‑114 (MQ=255)
                                                                       aaaGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGATAAGGAACGTCTCCCGCTGGATGCCCATGAACCCCAGCCTGAACCAGTGGAACAGGTTAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGAtttt                                                                         >  1:1407090/1‑150 (MQ=255)
                                                                       aaaGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACATTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGAAGCTCGGCGATCAGGTGCGGGGTGGTGAAGTATCAAACAATGGGTTGATCGACACATGGTAGCTGTTATAGGAttgt                                                                         >  1:1407080/1‑148 (MQ=255)
                                                                            agagCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCAGGCCGATTCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGaa                                                                    <  1:992882/150‑1 (MQ=255)
                                                                                  aaTCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCagga                                                                                                                                 <  1:479520/83‑1 (MQ=255)
                                                                                  aaTCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCagga                                                                                                                                 >  2:479520/1‑83 (MQ=255)
                                                                                   aTCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATggg                                                                                                          <  2:829141/105‑1 (MQ=255)
                                                                                   aTCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATggg                                                                                                          >  1:829141/1‑105 (MQ=255)
                                                                                     cGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAg                                                           <  1:1348096/150‑1 (MQ=255)
                                                                                      gTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCt                                                                                             >  2:642045/1‑115 (MQ=255)
                                                                                      gTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCt                                                                                             <  1:642045/115‑1 (MQ=255)
                                                                                           aaCCTGGCTGTAAAGCACGTTGCGAAGGAACGTCTCCCCATGGATGCTTAAGCAGCCCGGGAGACATTGCAGCGGTCGGTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTc                                                     <  1:619580/150‑1 (MQ=255)
                                                                                              cTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGaa                                                  >  2:82747/1‑150 (MQ=255)
                                                                                              cTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGaa                                                  <  2:343082/150‑1 (MQ=255)
                                                                                              cTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCAGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGacac                                                                                               >  1:1043735/1‑105 (MQ=255)
                                                                                              cTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCAGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGacac                                                                                               <  2:1043735/105‑1 (MQ=255)
                                                                                                             tttGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGAtttt                                                                         >  2:1605470/1‑112 (MQ=255)
                                                                                                             tttGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGAtttt                                                                         <  1:1605470/112‑1 (MQ=255)
                                                                                                             tttGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCt                                   >  2:11/1‑150 (MQ=255)
                                                                                                             tttGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATCGTTAGAAAATCGGGAGTTGTTCGACGCATTACCAttataa                                   >  2:803890/1‑146 (MQ=255)
                                                                                                                gagaAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGaa                                <  1:82747/150‑1 (MQ=255)
                                                                                                                gagaAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGaa                                >  1:1143350/1‑150 (MQ=255)
                                                                                                                 agaAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGATTTGTTCGAAGCATTGCCATTTTCTGAAg                               <  1:287510/150‑1 (MQ=255)
                                                                                                                     ggAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTa                            >  2:1605889/1‑149 (MQ=255)
                                                                                                                     ggAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTa                            <  1:1605889/149‑1 (MQ=255)
                                                                                                                     ggAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTAc                           >  1:1142455/1‑150 (MQ=255)
                                                                                                                      gAACGTCTCCCGGTGGATGCCCAAGCAGCccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagca                                                                          <  1:1909909‑M2/103‑75 (MQ=255)
                                                                                                                      gAACGTCTCCCGGTGGATGCCCAAGCAGCccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagca                                                                          >  2:1909909‑M2/1‑29 (MQ=255)
                                                                                                                          gTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGaaa                      >  2:965218/1‑150 (MQ=255)
                                                                                                                            ctcCCGGTGGATGCCCAAGCAGCccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagcagctcgctttagtcgctgtacgtcatttgggtgccacgattggtttcttttggc                     <  2:1319841‑M2/150‑128 (MQ=255)
                                                                                                                            ctcCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGaaaaa                    >  1:1537898/1‑150 (MQ=255)
                                                                                                                            ctcCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGaaaaa                    <  2:1143350/150‑1 (MQ=255)
                                                                                                                             tcCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGaa                                                  <  2:1834880/119‑1 (MQ=255)
                                                                                                                             tcCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGaa                                                  >  1:1834880/1‑119 (MQ=255)
                                                                                                                               ccGGTGGATGCCCAAGCAGCccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagc                                                                           <  1:1769151‑M2/93‑74 (MQ=255)
                                                                                                                               ccGGTGGATGCCCAAGCAGCccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagc                                                                           >  2:1769151‑M2/1‑20 (MQ=255)
                                                                                                                                cGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGAAAAAGTAc                <  2:1142455/150‑1 (MQ=255)
                                                                                                                                    ggATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGAAAAAGTACCGaa            <  1:764123/150‑1 (MQ=255)
                                                                                                                                    ggATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGAAAAAGTACCGaa            <  2:1537898/150‑1 (MQ=255)
                                                                                                                                      aTGCCCAAGCAGCCCGGGAGACATTGCATGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGAAAAAGTACCGAACa          <  1:11/150‑1 (MQ=255)
                                                                                                                                          ccAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGAAAAAGTACCGAACATCCg      >  1:569290/1‑150 (MQ=255)
                                                                                                                                              gcagcCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGAAAAAGTACCGAACATCCGTaaa  >  1:597951/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
ACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGAAAAAGTACCGAACATCCGTAAA  >  NC_002947/3581589‑3581880

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.