New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3581719	52 (0.710)	5 (0.070)	5/230	NT	9.0%	coding (772/942 nt)	PP_3160	hypothetical protein
	?	NC_002947	= 3581735	53 (0.780)					coding (788/942 nt)	PP_3160	hypothetical protein

TCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGAAAAAGTAC  >  NC_002947/3581573‑3581866                                                                                                                                                   |                                                                                                                                                     tCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTgg                                                                                                                                                   <  2:1680302/150‑1 (MQ=255)         agGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCaa                                                                                                                                           <  2:660217/150‑1 (MQ=255)                 acacGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCccg                                                                                                                                   <  1:1746096‑M2/150‑4 (MQ=255)                  cacGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCccgg                                                                                                                                  >  2:1875354‑M2/1‑146 (MQ=255)                    cGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCccggga                                                                                                                                >  1:1901563‑M2/1‑144 (MQ=255)                     gCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGgctgcttgggcatccaccgggag                                                                                                                               <  2:1319841‑M1/150‑24 (MQ=255)                       cAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCgcgggagac                                                                                                                             <  1:921411‑M2/150‑10 (MQ=255)                          aaGAAACCAATCGTGGCACCCAAATGACGTAATCAGGCTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑tt                                                                                                                         >  1:460467/1‑150 (MQ=255)                           aGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTg                                                                                                                        <  2:1417439/150‑1 (MQ=255)                            gAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGc                                                                                                                       <  1:206451/150‑1 (MQ=255)                               aCCAATCGTGGCACCCAAATGACGTACAGAGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCagg                                                                                                                    <  2:460467/150‑1 (MQ=255)                                  aaTCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCaggagg                                                                                                                 >  2:24028/1‑150 (MQ=255)                                        ggCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGCATCGTTTTATCCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTaa                                                                                                           <  2:59229/150‑1 (MQ=255)                                           aCCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTaa                                                                                                           >  2:388263/1‑147 (MQ=255)                                           aCCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTaa                                                                                                           <  1:388263/147‑1 (MQ=255)                                               aaaTGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCaa                                                                                                    >  2:1102323/1‑150 (MQ=255)                                                aaTGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCaaa                                                                                                   <  2:1746096/150‑1 (MQ=255)                                                aaTGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCaaa                                                                                                   <  1:24028/150‑1 (MQ=255)                                                       tACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATggg                                                                                            <  1:780723/150‑1 (MQ=255)                                                           gCGACCAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGa                                                                                        >  2:764123/1‑150 (MQ=255)                                                               cTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATggg                                                                                            <  2:1032492/142‑1 (MQ=255)                                                               cTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATggg                                                                                            >  1:1032492/1‑142 (MQ=255)                                                                tAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGac                                                                                   >  2:287510/1‑150 (MQ=255)                                                                          tgctgGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGgctgcttgggcatccaccgggagacgttc                                                                                                                         <  1:1909909‑M1/103‑30 (MQ=255)                                                                          tgctgGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGgctgcttgggcatccaccgggagacgttc                                                                                                                         >  2:1909909‑M1/1‑74 (MQ=255)                                                                           gctggctgGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGgctgcttgggcatccaccgg                                                                                                                                  >  2:1769151‑M1/1‑73 (MQ=255)                                                                           gctggctgGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGgctgcttgggcatccaccgg                                                                                                                                  <  1:1769151‑M1/93‑21 (MQ=255)                                                                             tggctggTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGc                                                                      >  1:343082/1‑150 (MQ=255)                                                                               gctggTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCt                                                                        <  1:1435104/146‑1 (MQ=255)                                                                               gctggTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCt                                                                        >  2:1435104/1‑146 (MQ=255)                                                                                 tggTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATc                                                                                                      >  1:1308220/1‑114 (MQ=255)                                                                                 tggTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATc                                                                                                      <  2:1308220/114‑1 (MQ=255)                                                                                        aaaGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGATAAGGAACGTCTCCCGCTGGATGCCCATGAACCCCAGCCTGAA‑CCAGTGGAACAGGTTAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGAtttt                                                           >  1:1407090/1‑150 (MQ=255)                                                                                        aaaGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACATTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGAAGCTCGGCGATCAGGTGC‑GGGGTGGTGAAGTATCAAACAATGGGTTGATCGACACATGGTAGCTGTTATAGGAttgt                                                           >  1:1407080/1‑148 (MQ=255)                                                                                             agagCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCAGGCCGATTCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGaa                                                      <  1:992882/150‑1 (MQ=255)                                                                                                   aaTCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCagga                                                                                                                   <  1:479520/83‑1 (MQ=255)                                                                                                   aaTCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCagga                                                                                                                   >  2:479520/1‑83 (MQ=255)                                                                                                    aTCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATggg                                                                                            >  1:829141/1‑105 (MQ=255)                                                                                                    aTCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATggg                                                                                            <  2:829141/105‑1 (MQ=255)                                                                                                      cGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAg                                             <  1:1348096/150‑1 (MQ=255)                                                                                                       gTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCt                                                                               <  1:642045/115‑1 (MQ=255)                                                                                                       gTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCt                                                                               >  2:642045/1‑115 (MQ=255)                                                                                                            aaCCTGGCTGTAAAGCACGTTGCGAAGGAACGTCTCCCCATGGATGCTTAAGCAGCCCGGGAGACA‑TTGCAGCGGTCGGTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTc                                       <  1:619580/150‑1 (MQ=255)                                                                                                               cTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGaa                                    <  2:343082/150‑1 (MQ=255)                                                                                                               cTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGaa                                    >  2:82747/1‑150 (MQ=255)                                                                                                               cTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCAGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGacac                                                                                 >  1:1043735/1‑105 (MQ=255)                                                                                                               cTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCAGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGacac                                                                                 <  2:1043735/105‑1 (MQ=255)                                                                                                                              tttGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGAtttt                                                           >  2:1605470/1‑112 (MQ=255)                                                                                                                              tttGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGAtttt                                                           <  1:1605470/112‑1 (MQ=255)                                                                                                                              tttGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCt                     >  2:11/1‑150 (MQ=255)                                                                                                                              tttGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATCGTTAGAAAATCGGGAGTTGTTCGACGCATTACCAttataa                     >  2:803890/1‑146 (MQ=255)                                                                                                                                 gagaAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGaa                  >  1:1143350/1‑150 (MQ=255)                                                                                                                                 gagaAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGaa                  <  1:82747/150‑1 (MQ=255)                                                                                                                                  agaAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGATTTGTTCGAAGCATTGCCATTTTCTGAAg                 <  1:287510/150‑1 (MQ=255)                                                                                                                                      ggAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTa              >  2:1605889/1‑149 (MQ=255)                                                                                                                                      ggAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTa              <  1:1605889/149‑1 (MQ=255)                                                                                                                                      ggAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTAc             >  1:1142455/1‑150 (MQ=255)                                                                                                                                       gAACGTCTCCCGGTGGATGCCCAAGCAGCccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagca                                                            >  2:1909909‑M2/1‑29 (MQ=255)                                                                                                                                       gAACGTCTCCCGGTGGATGCCCAAGCAGCccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagca                                                            <  1:1909909‑M2/103‑75 (MQ=255)                                                                                                                                           gTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGaaa        >  2:965218/1‑150 (MQ=255)                                                                                                                                           gTCTCCCGCgctgcttgggcatccaccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagcagctcgctttagtcgctgtacgtcatttgggtgccacgattggtttcttttg         <  1:921411‑M1/150‑142 (MQ=255)                                                                                                                                             ctcCCGGTGGATGCCCAAGCAGCccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagcagctcgctttagtcgctgtacgtcatttgggtgccacgattggtttcttttggc       <  2:1319841‑M2/150‑128 (MQ=255)                                                                                                                                             ctcCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGaaaaa      <  2:1143350/150‑1 (MQ=255)                                                                                                                                             ctcCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGaaaaa      >  1:1537898/1‑150 (MQ=255)                                                                                                                                              tcCCGGgctgcttgggcatccaccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagcagctcgctttagtcgctgtacgtcatttgggtgccacgattggtttcttttggcg      >  1:1901563‑M1/1‑6 (MQ=255)                                                                                                                                              tcCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGaa                                    <  2:1834880/119‑1 (MQ=255)                                                                                                                                              tcCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGaa                                    >  1:1834880/1‑119 (MQ=255)                                                                                                                                                ccGGgctgcttgggcatccaccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagcagctcgctttagtcgctgtacgtcatttgggtgccacgattggtttcttttggcgtg    >  2:1875354‑M1/1‑4 (MQ=255)                                                                                                                                                ccGGTGGATGCCCAAGCAGCccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagc                                                             <  1:1769151‑M2/93‑74 (MQ=255)                                                                                                                                                ccGGTGGATGCCCAAGCAGCccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagc                                                             >  2:1769151‑M2/1‑20 (MQ=255)                                                                                                                                                 cGGgctgcttgggcatccaccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagcagctcgctttagtcgctgtacgtcatttgggtgccacgattggtttcttttggcgtgt   <  1:1746096‑M1/150‑148 (MQ=255)                                                                                                                                                 cGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGAAAAAGTAc  <  2:1142455/150‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     TCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACA‑TTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGAAAAAGTAC  >  NC_002947/3581573‑3581866

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.