New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3581719 | 52 (0.710) | 5 (0.070) | 5/230 | NT | 9.0% | coding (772/942 nt) | PP_3160 | hypothetical protein |
? | NC_002947 | = 3581735 | 53 (0.780) | coding (788/942 nt) | PP_3160 | hypothetical protein |
TACCCTCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3581568‑3581719 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtctcccggGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTACAGCCAGGTTAAAACGATTCGCTCTGCTTTGGAACCAGCCAGCAGCTCGCTTTAGTCGCTGTACGTCATTTGGGTGCCACGATTGGTTTCTTTTGGCGTGT < NC_002947/3581735‑3581589 TACCCTCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCC > 1:660217/1‑150 GCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGGCTGCTTGGGCATCCACCGGGAG < 2:1319841/150‑1 AAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTC < 1:1531086/97‑1 AAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTC > 2:1531086/1‑97 TGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGGCTGCTTGGGCATCCACCGGGAGACGTTC < 1:1909909/103‑1 TGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGGCTGCTTGGGCATCCACCGGGAGACGTTC > 2:1909909/1‑103 GCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGGCTGCTTGGGCATCCACCGG < 1:1769151/93‑1 GCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGGCTGCTTGGGCATCCACCGG > 2:1769151/1‑93 GTCTCCCGCGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTACAGCCAGGTTAAAACGATTCGCTCTGCTTTGGAACCAGCCAGCAGCTCGCTTTAGTCGCTGTACGTCATTTGGGTGCCACGATTGGTTTCTTTTG < 1:921411/150‑1 TCCCGGGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTACAGCCAGGTTAAAACGATTCGCTCTGCTTTGGAACCAGCCAGCAGCTCGCTTTAGTCGCTGTACGTCATTTGGGTGCCACGATTGGTTTCTTTTGGCG > 1:1901563/1‑150 CCGGGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTACAGCCAGGTTAAAACGATTCGCTCTGCTTTGGAACCAGCCAGCAGCTCGCTTTAGTCGCTGTACGTCATTTGGGTGCCACGATTGGTTTCTTTTGGCGTG > 2:1875354/1‑150 CGGGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTACAGCCAGGTTAAAACGATTCGCTCTGCTTTGGAACCAGCCAGCAGCTCGCTTTAGTCGCTGTACGTCATTTGGGTGCCACGATTGGTTTCTTTTGGCGTGT < 1:1746096/150‑1 TACCCTCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3581568‑3581719 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtctcccggGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTACAGCCAGGTTAAAACGATTCGCTCTGCTTTGGAACCAGCCAGCAGCTCGCTTTAGTCGCTGTACGTCATTTGGGTGCCACGATTGGTTTCTTTTGGCGTGT < NC_002947/3581735‑3581589 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |