New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4016197	60 (0.820)	6 (0.080)	6/246	NT	9.1%	coding (55/1410 nt)	PP_3544	GntR family transcriptional regulator
	?	NC_002947	= 4016216	60 (0.830)					coding (74/1410 nt)	PP_3544	GntR family transcriptional regulator

CGTGGCGCACAGTCGCTTCGTCGCCCCCATGAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCTATTACCTGCTGGAACGGCGCGGGCTGATCCGCGCCCGGCCGCGCTCCGGGTATTTCGTCAA  >  NC_002947/4016053‑4016342                                                                                                                                                 |                                                                                                                                                   cGTGGCGCACAGTCGCTTCGTCGCCCCCATGAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTg                                                                                                                                               <  1:1769297/150‑1 (MQ=255) cGTGGCGCACAGTCGCTTCGTCGCCCCCATGAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCAGAACTGATCCGCTCCGGGGTGCTg                                                                                                                                               <  2:1429731/150‑1 (MQ=255)  gTGGCGCACAGTCGCTTCGTCGCCCCCATGAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTgg                                                                                                                                              <  1:1260961/150‑1 (MQ=255)   tGGCGCACAGTCGCTTCGTCGCCCCCATGAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTggg                                                                                                                                             >  1:1374092/1‑150 (MQ=255)        cacaGTCGCTTCGTCGCCCCTGTGAACCGCTAACCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCg                                                                                                                                        <  1:428961/150‑1 (MQ=255)            gTCGCTTCGTCGCCCCCATGAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑a                                                                                                                                   <  2:1376022/150‑1 (MQ=255)                  tcgtcgCCCCCATGAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGt                                                                                                                             <  1:1623824/150‑1 (MQ=255)                     tcgCCCCCATGAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGcc                                                                                                                          <  2:1609850/150‑1 (MQ=255)                     tcgCCCCCATGAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGcc                                                                                                                          <  1:480851/150‑1 (MQ=255)                        cccccATGAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGccgtc                                                                                                                       >  2:1738951/1‑150 (MQ=255)                         ccccATGAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGtgctggccggggcccagcac                                                                                                                                <  1:86557‑M1/141‑21 (MQ=255)                         ccccATGAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGtgctggccggggcccagcac                                                                                                                                >  2:86557‑M1/1‑121 (MQ=255)                         ccccATGAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGACCCGCTCCGGGGTGCTGGGCCCCGTCC‑AGCGCGTg                                                                                                                            >  1:1362649/1‑144 (MQ=255)                         ccccATGAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGACCCGCTCCGGGGTGCTGGGCCCCGTCC‑AGCGCGTg                                                                                                                            <  2:1362649/144‑1 (MQ=255)                           ccATGAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCGTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCTCGGGCC‑AGCTCGTGccgtccgt                                                                                                                    >  1:911463/1‑150 (MQ=255)                               gAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGt                                                                                                                                                   >  1:1620608/1‑116 (MQ=255)                               gAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGt                                                                                                                                                   <  2:1620608/116‑1 (MQ=255)                               gAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTgcgc                                                                                                                <  2:889754/150‑1 (MQ=255)                                        aTCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGt                                                                                                                             >  2:1797405/1‑128 (MQ=255)                                        aTCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGt                                                                                                                             <  1:1797405/128‑1 (MQ=255)                                        aTCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACgccagc                                                                                                       <  1:633440/150‑1 (MQ=255)                                        aTCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACgccagc                                                                                                       <  1:1738951/150‑1 (MQ=255)                                            cTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGa                                                                                                   <  1:644839/150‑1 (MQ=255)                                            cTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGa                                                                                                   >  2:852827/1‑150 (MQ=255)                                            cTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGCGCTGG‑CCGGGGCCCAGCAccccggagcggatcag                                                                                                                <  1:941612‑M2/137‑17 (MQ=255)                                            cTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGCGCTGG‑CCGGGGCCCAGCAccccggagcggatcag                                                                                                                >  2:941612‑M2/1‑121 (MQ=255)                                                   tCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGccgt                                                                                                                        <  2:853883/122‑1 (MQ=255)                                                   tCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGccgt                                                                                                                        >  1:853883/1‑122 (MQ=255)                                                    cACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACggg                                                                                           <  2:1585575/150‑1 (MQ=255)                                                    cACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTCCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACggg                                                                                           <  2:777660/150‑1 (MQ=255)                                                       gCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTc                                                                                        >  2:136067/1‑150 (MQ=255)                                                             ttGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCg                                                                                  >  2:819803/1‑150 (MQ=255)                                                              tgcctgccAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAGCGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGt                                                                                 <  1:1366273/150‑1 (MQ=255)                                                               gcctgccAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTc                                                                                <  1:852827/150‑1 (MQ=255)                                                                 ctgccAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTa                                                                              >  2:1096976/1‑150 (MQ=255)                                                                  tgccAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTAc                                                                             >  2:63381/1‑150 (MQ=255)                                                                   gccAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGccc                                                                                   >  1:1671813/1‑143 (MQ=255)                                                                   gccAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGccc                                                                                   <  2:1671813/143‑1 (MQ=255)                                                                    ccAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACgccagcc                                                                                                      >  1:252569/1‑123 (MQ=255)                                                                    ccAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACgccagcc                                                                                                      <  2:252569/123‑1 (MQ=255)                                                                      aGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCgtg                                                                         >  1:838092/1‑150 (MQ=255)                                                                       ggCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCgtgt                                                                        <  2:838092/150‑1 (MQ=255)                                                                        gCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGtt                                                                       >  1:1942452/1‑150 (MQ=255)                                                                           tGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCa                                                                    <  1:63381/150‑1 (MQ=255)                                                                            ggACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAg                                                                   >  1:1174104/1‑150 (MQ=255)                                                                             gACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAgg                                                                  >  1:1782102/1‑150 (MQ=255)                                                                              aCAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGc                                                                 <  2:1942452/150‑1 (MQ=255)                                                                                aGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCt                                                               <  2:1782102/150‑1 (MQ=255)                                                                                 gAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCt                                                               >  2:264944/1‑149 (MQ=255)                                                                                 gAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCt                                                               <  1:264944/149‑1 (MQ=255)                                                                                       cAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑a                                                                                                                                   >  1:854335/1‑75 (MQ=255)                                                                                       cAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑a                                                                                                                                   <  2:854335/75‑1 (MQ=255)                                                                                       cAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGAccc                                                                                                <  1:1466082/110‑1 (MQ=255)                                                                                       cAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGAccc                                                                                                >  2:1466082/1‑110 (MQ=255)                                                                                          aaTGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGcgctggccggggcccagcaccccggagcg                                                                                                                       <  2:1257783‑M1/85‑30 (MQ=255)                                                                                          aaTGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGcgctggccggggcccagcaccccggagcg                                                                                                                       >  1:1257783‑M1/1‑56 (MQ=255)                                                                                            tGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCTATTACCTGCTgg                                                   >  2:938162/1‑150 (MQ=255)                                                                                               aaCGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACggg                                                                                           >  1:239718/1‑107 (MQ=255)                                                                                               aaCGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACggg                                                                                           <  2:239718/107‑1 (MQ=255)                                                                                                aCGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCTATTACCTGCTGGAACg                                               >  1:592081/1‑150 (MQ=255)                                                                                                  gCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCTATTACCTGCTGGAACGgc                                             >  1:1917686/1‑150 (MQ=255)                                                                                                   cTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCTATTACCTGCTGGAACGgcg                                            <  2:1156827/150‑1 (MQ=255)                                                                                                        aaCGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCTATTACCTGCTGGAACGGCGCGGGc                                       <  2:1374092/150‑1 (MQ=255)                                                                                                        aaCGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCTATTACCTGCTGGAACGGCGCGGGc                                       <  2:1174104/150‑1 (MQ=255)                                                                                                             ttCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCTATTACCTGCTGGAACGGCGCGGGCTGATc                                  <  2:592081/150‑1 (MQ=255)                                                                                                                   gATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCTATTACCTGCTGGAACGGCGCGGGCTGATCCGCGcc                            >  1:359310/1‑150 (MQ=255)                                                                                                                   gATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCTATTACCTGCTGGAACGGCGCGGGCTGATCCGCGcc                            >  1:1353503/1‑150 (MQ=255)                                                                                                                              cGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCTATTACCTGCTGGAACGGCGCGGGCTGATCCGCGCCCGGCCGCGCTc                 >  2:1055813/1‑150 (MQ=255)                                                                                                                              cGAACTGATCCGCTCCGGGGTGCTGAAGCGTATCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCTATTACCTGCTGGAACGGCGCGGGCTGATCCGCGCCCGGCCGCGCTc                 >  1:50096/1‑150 (MQ=255)                                                                                                                                  cTGATCCGCTCCGGGGtgctgggccccggccagcgccccggagcggatcagttcggcaatgtcatcggcgaagcgttcgtagcgtttcattctggccttctgtccaagcctggcaggcaaggtggcgtgagtgtaag                           <  1:941612‑M1/137‑122 (MQ=255)                                                                                                                                  cTGATCCGCTCCGGGGtgctgggccccggccagcgccccggagcggatcagttcggcaatgtcatcggcgaagcgttcgtagcgtttcattctggccttctgtccaagcctggcaggcaaggtggcgtgagtgtaag                           >  2:941612‑M1/1‑16 (MQ=255)                                                                                                                                   tGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCTATTACCTGCTGGAACGGCGCGGGCTGATCCGCGCCCGGCCGCGCTCCGGGt            >  2:1155108/1‑150 (MQ=255)                                                                                                                                        cGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGccccggagcggatcagttcggcaatgtcatcggcgaagcgttcgtagcgtttcatt                                                                        >  1:1257783‑M2/1‑29 (MQ=255)                                                                                                                                        cGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGccccggagcggatcagttcggcaatgtcatcggcgaagcgttcgtagcgtttcatt                                                                        <  2:1257783‑M2/85‑57 (MQ=255)                                                                                                                                             cGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCTATTACCTGCTGGAACGGCGCGGGCTGATCCGCGCCCGGCCGCGCTCCGGGTATTTCGTCaa  <  1:1055813/150‑1 (MQ=255)                                                                                                                                                 gTGCTGGGCCCCGGCC‑AGCAccccggagcggatcagttcggcaatgtcatcggcgaagcgttcgtagcgtttcattctggccttctgtccaagcctggcaggcaaggtggcgtgagtgtaagggatcagcggttcatgggg       <  1:86557‑M2/141‑122 (MQ=255)                                                                                                                                                 gTGCTGGGCCCCGGCC‑AGCAccccggagcggatcagttcggcaatgtcatcggcgaagcgttcgtagcgtttcattctggccttctgtccaagcctggcaggcaaggtggcgtgagtgtaagggatcagcggttcatgggg       >  2:86557‑M2/1‑20 (MQ=255)                                                                                                                                                 |                                                                                                                                                   CGTGGCGCACAGTCGCTTCGTCGCCCCCATGAACCGCTGATCCCTTACACTCACGCCACCTTGCCTGCCAGGCTTGGACAGAAGGCCAGAATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCC‑AGCGCGTGCCGTCCGTGCGCTACGCCAGCCAGACCCACGGGGTCAGCCCGTCTACCGTGTTCCAGGCCTATTACCTGCTGGAACGGCGCGGGCTGATCCGCGCCCGGCCGCGCTCCGGGTATTTCGTCAA  >  NC_002947/4016053‑4016342

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.