New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4988169	63 (0.860)	4 (0.060)	4/240	NT	6.6%	coding (535/744 nt)	ycgR	flagellar brake protein YcgR
	?	NC_002947	= 4988204	53 (0.750)					coding (570/744 nt)	ycgR	flagellar brake protein YcgR

GGTGCTCACCTCAAGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCG  >  NC_002947/4988058‑4988351                                                                                                                                                   |                                                                                                                                                    ggTGCTCACCTCAAGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGggc                                                                                                                                                  <  1:1509136‑M2/150‑4 (MQ=255)     cTCACCTCAAGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCtgg                                                                                                                                              <  2:183519/150‑1 (MQ=255)      tCACCTCAAGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCt                                                                                                                                                <  1:1739288/147‑1 (MQ=255)      tCACCTCAAGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCt                                                                                                                                                >  2:1739288/1‑147 (MQ=255)       cACCTCAAGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCtggtg                                                                                                                                            <  1:988686/150‑1 (MQ=255)         ccTCAAGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGa                                                                                                                                          <  1:1451169/150‑1 (MQ=255)          cTCAAGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGg                                                                                                                                                    >  1:380151‑M2/1‑138 (MQ=255)          cTCAAGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGg                                                                                                                                                    <  2:380151‑M2/139‑2 (MQ=255)           tCAAGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGggc                                                                                                                                                  <  2:664418‑M2/140‑4 (MQ=255)           tCAAGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGggc                                                                                                                                                  >  1:664418‑M2/1‑137 (MQ=255)           tCAAGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCtggt                                                                                                                                             >  2:431821/1‑145 (MQ=255)           tCAAGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCtggt                                                                                                                                             <  1:431821/145‑1 (MQ=255)             aaGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACAcc                                                                                                                                      <  2:381981/150‑1 (MQ=255)             aaGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACAcc                                                                                                                                      >  1:176209/1‑150 (MQ=255)             aaGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACAcc                                                                                                                                      >  1:632387/1‑150 (MQ=255)                     cGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGa                                                                                                                              <  2:1011734/150‑1 (MQ=255)                      ggCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAg                                                                                                                             <  2:632387/150‑1 (MQ=255)                                gAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATc                                                                                                                   >  1:31982/1‑150 (MQ=255)                                     aaGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCAc                                                                                                              >  1:1119539/1‑150 (MQ=255)                                         tgctgGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAAGGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATg                                                                                                          >  1:451124/1‑150 (MQ=255)                                            tgGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCCACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAag                                                                                                       >  1:1087718/1‑150 (MQ=255)                                             ggATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCtg                                                                                                                                               <  1:1364782/109‑1 (MQ=255)                                             ggATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCtg                                                                                                                                               >  2:1364782/1‑109 (MQ=255)                                             ggATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGt                                                                                                                                 >  2:353452/1‑123 (MQ=255)                                             ggATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGt                                                                                                                                 <  1:353452/123‑1 (MQ=255)                                                   ctcGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCAt                                                                                                >  2:979542/1‑150 (MQ=255)                                                    tcGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAgc                                                                                                    >  1:1049087/1‑145 (MQ=255)                                                    tcGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAgc                                                                                                    <  2:1049087/145‑1 (MQ=255)                                                    tcGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATc                                                                                               >  1:1452173/1‑150 (MQ=255)                                                                     aCTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCTACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCgg                                                                              >  1:135980/1‑150 (MQ=255)                                                                        gcgcTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGgcgt                                                                           <  2:1509136/150‑1 (MQ=255)                                                                          gcTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGgcgtgc                                                                         >  2:135909/1‑150 (MQ=255)                                                                            ttCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGgcgtgcgt                                                                       >  2:1713435/1‑150 (MQ=255)                                                                             tCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGtt                                                                      >  1:711250/1‑150 (MQ=255)                                                                                 aGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGggc                                                                                                                                                  <  1:1413032‑M2/70‑4 (MQ=255)                                                                                 aGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGggc                                                                                                                                                  >  2:1413032‑M2/1‑67 (MQ=255)                                                                                  ggCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCcac                                                                 >  2:1724309/1‑150 (MQ=255)                                                                                   gCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCcaca                                                                >  1:1570363/1‑150 (MQ=255)                                                                                   gCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCcaca                                                                >  2:1841608/1‑150 (MQ=255)                                                                                    cAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACaa                                                               <  2:1087718/150‑1 (MQ=255)                                                                                     aaTGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAAc                                                              <  2:1119539/150‑1 (MQ=255)                                                                                           gAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCtgg                                                                                                                                              <  1:550615/64‑1 (MQ=255)                                                                                           gAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCtgg                                                                                                                                              >  2:550615/1‑64 (MQ=255)                                                                                            aaGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCg                                                       <  2:1570363/150‑1 (MQ=255)                                                                                              gACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCggg                                                     <  2:488428/150‑1 (MQ=255)                                                                                                 cGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGc                                                                                 <  2:1894454/119‑1 (MQ=255)                                                                                                 cGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGc                                                                                 >  1:1894454/1‑119 (MQ=255)                                                                                                   cTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGgc                                                <  2:711250/150‑1 (MQ=255)                                                                                                      gCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGgcgca                                             <  1:1896561/150‑1 (MQ=255)                                                                                                        aaCTGGGCCGGGGGTAGGGGCGCTGCAAGGCGGGAAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGgcgcagc                                           <  2:85980/150‑1 (MQ=255)                                                                                                        aaCTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGggcccagttgcaagcggtcttcgacattgccttcgaagcgcagtttgcagccggtggccgagatatccagcagcttgcctcgcatggcgccgttgcccttgaggtg                                           <  2:370506‑M2/150‑107 (MQ=255)                                                                                                         aCTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGGGTGCGTTTCCACAACCTGAGCGGGCAGgcgcagcg                                          >  2:645757/1‑150 (MQ=255)                                                                                                         aCTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGgcgcagcg                                          >  1:1157612/1‑150 (MQ=255)                                                                                                             ggCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAg                                      >  2:95377/1‑150 (MQ=255)                                                                                                               ccAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGc                                                                                 >  1:1063697/1‑105 (MQ=255)                                                                                                               ccAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGc                                                                                 <  2:1063697/105‑1 (MQ=255)                                                                                                                cAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATc                                   >  1:1462933/1‑150 (MQ=255)                                                                                                                  ggTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCga                                 <  1:979542/150‑1 (MQ=255)                                                                                                                        tGAGCGCTTCAAGGCGGGCAACCCACTGggcccagttgcaagcggtcttcgacattgccttcgaagcgca                                                                                                           >  2:1051155‑M2/1‑28 (MQ=255)                                                                                                                        tGAGCGCTTCAAGGCGGGCAACCCACTGggcccagttgcaagcggtcttcgacattgccttcgaagcgca                                                                                                           <  1:1051155‑M2/70‑43 (MQ=255)                                                                                                                         gAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTc                          >  2:596043/1‑150 (MQ=255)                                                                                                                           gcgcTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCgt                        <  1:596043/150‑1 (MQ=255)                                                                                                                             gcTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCgtgt                      >  1:1580778/1‑150 (MQ=255)                                                                                                                              cTTCAAGGCGGGCAACCCACTGCGACTGGATGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTa                     <  2:1699231/150‑1 (MQ=255)                                                                                                                               ttCAAGGCGGGCAACCCACTGggcccagttgcaagcggtcttcgacattgccttcgaagcgcagtttgcagccggtggccgagatatccagcagcttgcctcgcatggcgccgttgcccttgaggtgagcaccgtcaaggatgatgtcga                    >  1:370506‑M2/1‑21 (MQ=255)                                                                                                                               ttCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCga                                 >  2:166234/1‑137 (MQ=255)                                                                                                                               ttCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCga                                 <  1:166234/137‑1 (MQ=255)                                                                                                                               ttCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTAc                    >  2:672909/1‑150 (MQ=255)                                                                                                                                tCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTAcc                   <  1:1724309/150‑1 (MQ=255)                                                                                                                                   aGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGc                >  1:218363/1‑150 (MQ=255)                                                                                                                                           aaCCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTc                          <  2:353979/132‑1 (MQ=255)                                                                                                                                           aaCCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTc                          >  1:353979/1‑132 (MQ=255)                                                                                                                                           aaCCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGt        >  1:262848/1‑150 (MQ=255)                                                                                                                                             cccACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGtaa      <  2:1452173/150‑3 (MQ=255)                                                                                                                                               cACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAgg    <  2:945842/150‑1 (MQ=255)                                                                                                                                                 cTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGgcg  >  1:1229589/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                    GGTGCTCACCTCAAGGGCAACGGCGCCATGCGAGGCAAGCTGCTGGATATCTCGGCCACCGGCTGCAAACTGCGCTTCGAAGGCAATGTCGAAGACCGCTTGCAACTGGGCCAGGTGTATGAGCGCTTCAAGGCGGGCAACCCACTGGGCCTGGTGGACACCATGGTCGAGCTGCGTCATCTGCACTATGAAGAGCGCATCAACACCACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCG  >  NC_002947/4988058‑4988351

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.