New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5036230	28 (0.380)	6 (0.080)	6/242	NT	12.5%	intergenic (+686/‑11)	PP_4439/PP_4441	transposase/transposase
	?	NC_002947	6155313 =	57 (0.800)					intergenic (‑67/+139)	PP_5398/PP_5399	transposase/hypothetical protein

TGGGCTTTGAACGGTTTCGGATAAGAGCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTCCTCAAAGTTTCCAAGCTGCTGCATTCAGACGGCCA  >  NC_002947/6155206‑6155462                                                                                                            |                                                                                                                                                      tGGGCTTTGAACGGTTTCGGATAAGAGCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCt                                                                                                                 >  2:31747/1‑146 (MQ=33) tGGGCTTTGAACGGTTTCGGATAAGAGCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCt                                                                                                                 <  1:31747/146‑1 (MQ=33)     cTTTGAACGGTTTCGGATAAGAGCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGt                                                                                                         <  2:875475/150‑1 (MQ=40)      tttGAACGGTTTCGGATAAGAGCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGtt                                                                                                        >  2:1740711/1‑150 (MQ=40)      tttGAACGGTTTCGGATAAGAGCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGtt                                                                                                        <  2:1778407/150‑1 (MQ=40)       ttGAACGGTTTCGGATAAGAGCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTc                                                                                                       <  2:368655/150‑1 (MQ=255)         gAACGGTTTCGGATAAGAGCTTCGGTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCga                                                                                                     <  1:1299676/150‑1 (MQ=255)          aaCGGTTTCGGATAAGAGCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCt                                                                                                                 >  2:1723850/1‑137 (MQ=33)          aaCGGTTTCGGATAAGAGCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCt                                                                                                                 <  1:1723850/137‑1 (MQ=33)              gTTTCGGATAAGAGCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACgg                                                                                                <  1:1561174/150‑1 (MQ=255)               tttCGGATAAGAGCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACggg                                                                                               >  2:1417395/1‑150 (MQ=255)                     aTAAGAGCTTCGTTGGCGCATGGGAATCCTGGCAATAAGGGTGATCGCGTCTGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATTCGTGCGAGACGGGAGCaga                                                                                         >  2:1413180/1‑150 (MQ=255)                     aTAAGAGCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCaga                                                                                         >  2:1321288/1‑150 (MQ=255)                     aTAAGAGCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCaga                                                                                         <  2:1106232/150‑1 (MQ=255)                         gagCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTg                                                                                     >  1:277223/1‑150 (MQ=255)                         gagCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTg                                                                                     >  2:1712665/1‑150 (MQ=255)                         gagCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGACTTTGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTg                                                                                     <  1:19100/150‑1 (MQ=255)                          agCTTGGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGt                                                                                    >  2:1933142/1‑150 (MQ=255)                            cTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGt                                                                                                               >  1:1655468/1‑121 (MQ=35)                            cTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGt                                                                                                               <  2:1655468/121‑1 (MQ=35)                             tgcGTTGGCGCATGGAAATCCTGGCAAGAAGGGTGATGGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCGGGACGCTTACTCGCTGTATGCGTTGGAGACGGGAGCAGAATTGTACt                                                                                 >  2:1315/3‑150 (MQ=17)                                 ttGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCt                                                                             <  2:1148210/150‑1 (MQ=255)                                 ttGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCt                                                                             <  2:277223/150‑1 (MQ=255)                                 ttGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCt                                                                             <  1:487064/150‑1 (MQ=255)                                  tGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTg                                                                            <  2:654721/150‑1 (MQ=255)                                    gcgcATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGa                                                                          <  1:1712665/150‑1 (MQ=255)                                        aTGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCa                                                                      >  1:453577/1‑150 (MQ=255)                                           gAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAggg                                                                   <  1:1223143/150‑1 (MQ=255)                                           cgaactccagcattaagggcgatggtgtccgcgtatttttaagcggacgcgatcacccttattgcTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTg                                                                                     >  1:1855249‑M2/66‑132 (MQ=255)                                           cgaactccagcattaagggcgatggtgtccgcgtatttttaagcggacgcgatcacccttattgcTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTg                                                                                     <  2:1855249‑M2/67‑1 (MQ=255)                                             aactccagcattaagggcgatggtgtccgcgtatttttaagcggacgcgatcacccttaatgcTGGAGTTCGGAAGGTGAGTTCGCCGGAc                                                                                                                            >  2:890312‑M2/64‑91 (MQ=255)                                             aactccagcattaagggcgatggtgtccgcgtatttttaagcggacgcgatcacccttaatgcTGGAGTTCGGAAGGTGAGTTCGCCGGAc                                                                                                                            <  1:890312‑M2/28‑1 (MQ=255)                                              aTCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGCGTCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGaaa                                                                >  1:1789211/1‑150 (MQ=255)                                                  tGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCt                                                                                                                 >  1:1196447/1‑97 (MQ=35)                                                  tGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCt                                                                                                                 <  2:1196447/97‑1 (MQ=35)                                                  tGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAg                                                            >  2:814994/1‑150 (MQ=255)                                                      aaTAAGGGTGATCGCGGCCGCTTAAAAATACGCGGACACCATCGGCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGCGTTGTACTTTCTGGACGCAGGGAAATCAGGTGc                                                        >  2:650443/1‑150 (MQ=255)                                                       aTAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCg                                                       >  1:1376096/1‑150 (MQ=255)                                                        tAAGGGTGATCGCGTCCGCTTAAAAAAACGCGGACACCAGGACCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGAAGGGAGCAGAGTTCTACTTTCTGTACACAGGGAAATCACGTGccg                                                      <  2:611670/150‑3 (MQ=21)                                                           gggTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCaga                                                                                         <  2:1433848/112‑1 (MQ=255)                                                           gggTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCaga                                                                                         >  1:1433848/1‑112 (MQ=255)                                                           gggTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAgg                                                                    >  1:1003927/1‑133 (MQ=255)                                                           gggTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAgg                                                                    <  2:1003927/133‑1 (MQ=255)                                                             gTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTa                                                 >  1:895147/1‑150 (MQ=255)                                                              tGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTg                                                                            >  2:233078/1‑122 (MQ=255)                                                              tGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTg                                                                            <  1:233078/122‑1 (MQ=255)                                                              tGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCa                                                                      <  2:517103/128‑1 (MQ=255)                                                              tGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCa                                                                      >  1:517103/1‑128 (MQ=255)                                                                atggtgtccgcgtatttttaagcggacgcgatcacccttattgcTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACg                                                                                                 >  1:1729153‑M2/45‑99 (MQ=255)                                                                atggtgtccgcgtatttttaagcggacgcgatcacccttattgcTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACg                                                                                                 <  2:1729153‑M2/55‑1 (MQ=255)                                                                aTCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTgg                                                                           >  1:1130001/1‑121 (MQ=255)                                                                aTCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTgg                                                                           <  2:1130001/121‑1 (MQ=255)                                                                aTCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTg                                              >  2:1848465/1‑150 (MQ=255)                                                                aTCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTg                                              <  2:453577/150‑1 (MQ=255)                                                                        cGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAAttt                                      >  2:1402778/1‑150 (MQ=255)                                                                         gCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCTGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTGCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTc                                     <  1:1413180/150‑1 (MQ=255)                                                                                 aTACGCGGACACCATCACCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAACTACTGCAGAATTTGCCCAAAgg                             >  1:523837/1‑149 (MQ=255)                                                                                     gcgGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTCCTCAAAg                              >  2:727261/1‑145 (MQ=255)                                                                                     gcgGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTCCTCAAAg                              <  1:727261/145‑1 (MQ=255)                                                                                     gcgGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTCCTCAAAGTTTcc                         >  1:1334428/1‑150 (MQ=255)                                                                                       ggACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTCCTCAAAGTTTCCaa                       <  1:1933142/150‑1 (MQ=255)                                                                                            ccATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTCCTCAAAGTTTCCAAgctgc                  <  1:1740711/150‑1 (MQ=255)                                                                                              aTCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGTGTTCAGAGTAGTACTTTGTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTCCTCAAAGTTTCCAAGctgctg                >  1:628368/1‑150 (MQ=38)                                                                                                    cTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGaa                                                                 <  2:922705/95‑1 (MQ=255)                                                                                                    cTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGaa                                                                 >  1:922705/1‑95 (MQ=255)                                                                                                         tgcTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTCCTCAAAGTTTCCAAGCTGCTGCATTCAGACgg     <  2:895147‑M2/147‑1 (MQ=255)                                                                                                            tGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGCGACGACAGGCCGGGTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTCCTCAAAGTTTCCAAGCTGCTGCATTCAGACGGCCa  >  2:1233319/1‑150 (MQ=255)                                                                                                            tGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGAc                                                                                                  <  1:1599665/54‑1 (MQ=255)                                                                                                            tGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGAc                                                                                                  >  2:1599665/1‑54 (MQ=255)                                                                                                            tGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGc                                                        <  1:1456902/96‑1 (MQ=255)                                                                                                            tGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGc                                                        >  2:1456902/1‑96 (MQ=255)                                                                                                            tGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGCAGGGTTGCAGAATTTCCTCAAAGTTTCCAAGCTGCTGCATTCAGACGGCCa  <  1:1321288/150‑1 (MQ=255)                                                                                                            |                                                                                                                                                      TGGGCTTTGAACGGTTTCGGATAAGAGCTTCGTTGGCGCATGGAAATCCTGGCAATAAGGGTGATCGCGTCCGCTTAAAAATACGCGGACACCATCGCCCTTAATGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTCCTCAAAGTTTCCAAGCTGCTGCATTCAGACGGCCA  >  NC_002947/6155206‑6155462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.