New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5681938	54 (0.740)	4 (0.060)	4/232	NT	7.5%	coding (78/474 nt)	PP_4987	putative Chemotaxis protein
	?	NC_002947	= 5681955	48 (0.700)					coding (61/474 nt)	PP_4987	putative Chemotaxis protein

CACGGCGTCTCACCACCGCACGCGGCCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTCCTGGTACGGCTTGCCCAGGTATTCGTTGA  >  NC_002947/5681789‑5682087                                                                                                                                                      |                                                                                                                                                       aacGGCGTCCCACCACCGACCGCGGCCGCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCGCACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGC                                                                                                                                                        <  2:913598‑M1/149‑1 (MQ=255)     gCGTCTCACCACCGCACGCGGCCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAaca                                                                                                                                                    <  2:1746376/150‑1 (MQ=255)     gCGTCTCACCACCGCACGCGGCCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAaca                                                                                                                                                    >  1:762286/1‑150 (MQ=255)          tcACGACCGCACGCGGCCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑Gc                                                                                                                                              >  2:518996/1‑150 (MQ=255)          tcACCACCGCGGGCGGCCGCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCCGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTTGGCAACACCA‑Gc                                                                                                                                              >  2:519008/1‑150 (MQ=255)          tcACAACCGCACGCGGCCTCGAAAGCAATAAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCAAGGTGCCCGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCTCCACGTTGGTCAACACCA‑Gc                                                                                                                                              >  2:214580/1‑150 (MQ=255)           caccacCGCACGCGGCCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCg                                                                                                                                             >  1:804221/1‑150 (MQ=255)              caccGCACGCGGCCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGc                                                                                                                                          >  1:1488842/1‑150 (MQ=255)                  gCACGCGGCCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTc                                                                                                                                      <  2:1588207/150‑1 (MQ=255)                    aCGCGGCCGCGAAACCGATCAACGGCGCTCCTTGCTGACGCCAGTCGATCCACCCCAGGTGCGATGCGGCGTCGCCCTGGTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTGGGGCAACACCA‑GCGTGCGGTCgc                                                                                                                                    >  2:114493‑M2/1‑148 (MQ=255)                      gcgGCCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCgaccgcacgctggtgttgccc                                                                                                                                   >  1:887304‑M1/1‑129 (MQ=255)                        ggCCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCgcccaa                                                                                                                                <  1:1799755‑M2/150‑7 (MQ=255)                            tcgAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGc                                                                                                                            <  2:1799755‑M2/147‑1 (MQ=255)                             cgAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCa                                                                                                                           <  1:1280482‑M2/148‑1 (MQ=255)                             cgAAACCGATCAACGGCAGGCGTTACTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGCTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCa                                                                                                                           <  1:1612339‑M2/148‑1 (MQ=255)                                    gactaccGGCAGGCGTTGCTGACCCCAGTCTATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCCGGTTACGCTGCCCGCTCAACTCGGCCACNGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAg                                                                                                                    <  1:819174/144‑1 (MQ=255)                                    gATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAg                                                                                                                    >  2:657997/1‑150 (MQ=255)                                     aTCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGc                                                                                                                   <  2:737990/150‑1 (MQ=255)                                        aaCGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCg                                                                                                                <  1:1649305/150‑1 (MQ=255)                                         aCGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCGACCGCACGC‑TGGTGTTgcccaacgtggcggtggccgagt                                                                                                               >  2:887304‑M2/1‑127 (MQ=255)                                         aCGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCa                                                                                                                                                 <  2:743196/117‑1 (MQ=255)                                         aCGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCa                                                                                                                                                 >  1:743196/1‑117 (MQ=255)                                         aCGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCgg                                                                                                               >  1:1409139/1‑150 (MQ=255)                                               ggCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACCCTGCCCGCCCACCTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCCGTCTCCCAACGGCAGCAACAGCCCGGTCAGgc                                                                                                         <  1:1324516/150‑1 (MQ=255)                                                      cTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGAGAGACTGTAAACAGCTACTATTTGACGCTGCTTTCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGTCAGCAACAGCCCGGTCAGGCTGCTgcg                                                                                                  >  1:822130/1‑150 (MQ=255)                                                             cAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCg                                                                                           <  1:720544/150‑1 (MQ=255)                                                              aGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCgg                                                                                          <  2:840463/150‑1 (MQ=255)                                                               gTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGa                                                                                         >  2:870709/1‑150 (MQ=255)                                                               gTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGa                                                                                         >  1:1342319/1‑150 (MQ=255)                                                                tCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGaa                                                                                        >  2:1281068/1‑150 (MQ=255)                                                                   aTCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATc                                                                                     >  1:573310/1‑150 (MQ=255)                                                                       aCCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGgca                                                                                                                           <  1:838840/108‑1 (MQ=255)                                                                       aCCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGgca                                                                                                                           >  2:838840/1‑108 (MQ=255)                                                                       aCCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGtt                                                                                 >  1:681927/1‑150 (MQ=255)                                                                              gTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCGACCGCA‑CGCTGGTGTTgcccaacgtggcggtggccgagttgagcgggcagc                                                                                                   <  2:102692‑M2/125‑36 (MQ=255)                                                                              gTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCGACCGCA‑CGCTGGTGTTgcccaacgtggcggtggccgagttgagcgggcagc                                                                                                   >  1:102692‑M2/1‑90 (MQ=255)                                                                                    ggCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGATGCTGACCCAGCAGGCTGCTGCACTGGCCGGAAATCAGTTCAAGCATGGGCCt                                                                    >  2:50286/1‑150 (MQ=255)                                                                                       ggggTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAac                                                                                                                                                     >  2:1871763/1‑67 (MQ=255)                                                                                       ggggTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAac                                                                                                                                                     <  1:1871763/67‑1 (MQ=255)                                                                                       ggggTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGc                                                                 <  2:292326/150‑1 (MQ=255)                                                                                            cGCCATGCTGGCACCCCAGGTTACCCTGCCTGCTCAACTCGGCCAGCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCaa                                                            <  2:822130/150‑1 (MQ=255)                                                                                             gCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATggg                                                                       <  1:1798987/138‑1 (MQ=255)                                                                                             gCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATggg                                                                       >  2:1798987/1‑138 (MQ=255)                                                                                              ccATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATg                                                          >  1:451070/1‑150 (MQ=255)                                                                                                aTGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATggg                                                        >  1:1486117/1‑150 (MQ=255)                                                                                                aTGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATggg                                                        <  1:1870642/150‑1 (MQ=255)                                                                                                aTGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATggg                                                        >  2:1211594/1‑150 (MQ=255)                                                                                                aTGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATggg                                                        <  2:1486117/150‑1 (MQ=255)                                                                                                 tGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCgcc                                                                                                                                   >  1:1344754‑M2/1‑71 (MQ=255)                                                                                                 tGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCgcc                                                                                                                                   <  2:1344754‑M2/74‑4 (MQ=255)                                                                                                 tGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGc                                                       <  1:846534/150‑1 (MQ=255)                                                                                                 tGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGc                                                       <  1:657997/150‑1 (MQ=255)                                                                                                     ggCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATg                                                   >  2:1362610/1‑150 (MQ=255)                                                                                                      gCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGgca                                                                                                                           <  2:145901/77‑1 (MQ=255)                                                                                                      gCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGgca                                                                                                                           >  1:145901/1‑77 (MQ=255)                                                                                                         ccccAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGctct                                               <  1:1248752/148‑1 (MQ=255)                                                                                                         cacCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGctct                                               <  2:1488842/150‑1 (MQ=255)                                                                                                         cacCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGctct                                               >  1:1527908/1‑150 (MQ=255)                                                                                                               gTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGtt                                                                                 <  2:1056574/110‑1 (MQ=255)                                                                                                               gTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGtt                                                                                 >  1:1056574/1‑110 (MQ=255)                                                                                                                    gCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCaacaccagcgtgcggtcgcccaacgtggcggtggccgagttgagcgggcagcgtaacctggtgtgccagcatggcgaccccgcctggcac                                                              <  2:102692‑M1/125‑91 (MQ=255)                                                                                                                    gCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCaacaccagcgtgcggtcgcccaacgtggcggtggccgagttgagcgggcagcgtaacctggtgtgccagcatggcgaccccgcctggcac                                                              >  1:102692‑M1/1‑35 (MQ=255)                                                                                                                           gCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGctct                                               >  2:750111/1‑132 (MQ=255)                                                                                                                           gCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGctct                                               <  1:750111/132‑1 (MQ=255)                                                                                                                            cTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTCCTg                            <  1:518996/150‑1 (MQ=255)                                                                                                                            cTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTCCTg                            <  1:519008/150‑1 (MQ=255)                                                                                                                                aCTCGGCCACCGCCACGTTGGGCaacaccagcgtgcggtcgcccaacgtggcggtggccgagttgagcgggcagcgtaacctggtgtgccagcatggcgaccccgcctggcacctggggtggatcgactggcgtcagcaacgcctgccgt                         >  2:887304‑M1/1‑23 (MQ=255)                                                                                                                                  tCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTgcgc                                                                                                 <  2:802295/75‑1 (MQ=255)                                                                                                                                  tCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTgcgc                                                                                                 >  1:802295/1‑75 (MQ=255)                                                                                                                                      ccACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTCCTGGTACGGCTTg                  <  1:1281068/150‑1 (MQ=255)                                                                                                                                        aCCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGctct                                               <  1:198079/119‑1 (MQ=255)                                                                                                                                        aCCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGctct                                               >  2:198079/1‑119 (MQ=255)                                                                                                                                               cGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGAAACAGCGCGGTCAGGCTGATGCGGTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGTCGATGCTCTGCAACAGCAGCGATTCCTGGTACGGCTTGCCCAGGTAt         <  2:406447/150‑1 (MQ=255)                                                                                                                                                 ttGGGCgaccgcacgctggtgttgcccaacgtggcggtggccgagttgagcgggcagcgtaacctggtgtgccagcatggcgaccccgcctggcacctggggtggatcgactggcgtcagcaacgcctgccgttgatcggtttcgaggcc        <  1:1799755‑M1/150‑145 (MQ=255)                                                                                                                                                   gggCAACACCA‑GCGTGCGGTCgcccaacgtggcggtggccgagttgagcgggcagcgtaacctggtgtgccagcatggcgaccccgcctggcacctggggtggatcgactggcgtcagcaacgcctgccgttgatcggtttcgaggccgc     >  1:887304‑M2/1‑21 (MQ=255)                                                                                                                                                    ggCgaccgcacgctggtgttgcccaacgtggcggtggccgagttgagcgggcagcgtaacctggtgtgccagca                                                                                 >  1:1344754‑M1/1‑3 (MQ=255)                                                                                                                                                    ggCgaccgcacgctggtgttgcccaacgtggcggtggccgagttgagcgggcagcgtaacctggtgtgccagca                                                                                 <  2:1344754‑M1/74‑72 (MQ=255)                                                                                                                                                     gCgaccgcacgctggtgttgccccacgtggcggtggccgagttgagcgggcagcgtaacctggtgtgccaccagggcgacgccgcatcgcacctggggtggatcgactggcgtcagcaaggagcgccgttgatcggtttcgcggccgcgt    >  2:114493‑M1/1‑2 (MQ=255)                                                                                                                                                      cAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTCCTGGTACGGCTTGCCCAGGTATTCGTTGa  <  2:455142/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                       CACGGCGTCTCACCACCGCACGCGGCCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTCCTGGTACGGCTTGCCCAGGTATTCGTTGA  >  NC_002947/5681789‑5682087

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.