New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5681938	54 (0.740)	4 (0.060)	4/232	NT	7.5%	coding (78/474 nt)	PP_4987	putative Chemotaxis protein
	?	NC_002947	= 5681955	48 (0.700)					coding (61/474 nt)	PP_4987	putative Chemotaxis protein

GCACGCGGCCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTCCTGGTACGGCTTGCCCAGGTATTCGTTGACGCCGATGGC  >  NC_002947/5681806‑5682097                                                                                                                                                       |                                                                                                                                               gCACGCGGCCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTc                                                                                                                                                <  2:1588207/150‑1 (MQ=255)   aCGCGGCCGCGAAACCGATCAACGGCGCTCCTTGCTGACGCCAGTCGATCCACCCCAGGTGCGATGCGGCGTCGCCCTGGTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTGGGGCAACACCA‑GCGTGCGGTCgc                                                                                                                                              >  2:114493‑M2/1‑148 (MQ=255)       ggCCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCgcccaa                                                                                                                                          <  1:1799755‑M2/150‑7 (MQ=255)           tcgAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGc                                                                                                                                      <  2:1799755‑M2/147‑1 (MQ=255)            cgAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCa                                                                                                                                     <  1:1280482‑M2/148‑1 (MQ=255)            cgAAACCGATCAACGGCAGGCGTTACTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGCTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCa                                                                                                                                     <  1:1612339‑M2/148‑1 (MQ=255)                   gactaccGGCAGGCGTTGCTGACCCCAGTCTATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCCGGTTACGCTGCCCGCTCAACTCGGCCACNGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAg                                                                                                                              <  1:819174/144‑1 (MQ=255)                   gATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAg                                                                                                                              >  2:657997/1‑150 (MQ=255)                    aTCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGc                                                                                                                             <  2:737990/150‑1 (MQ=255)                       aaCGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCg                                                                                                                          <  1:1649305/150‑1 (MQ=255)                        aCGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCGACCGCACGC‑TGGTGTTgcccaacgtggcggtggccgagt                                                                                                                         >  2:887304‑M2/1‑127 (MQ=255)                        aCGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCgg                                                                                                                         >  1:1409139/1‑150 (MQ=255)                              ggCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACCCTGCCCGCCCACCTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCCGTCTCCCAACGGCAGCAACAGCCCGGTCAGgc                                                                                                                   <  1:1324516/150‑1 (MQ=255)                                     cTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGAGAGACTGTAAACAGCTACTATTTGACGCTGCTTTCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGTCAGCAACAGCCCGGTCAGGCTGCTgcg                                                                                                            >  1:822130/1‑150 (MQ=255)                                            cAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCg                                                                                                     <  1:720544/150‑1 (MQ=255)                                             aGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCgg                                                                                                    <  2:840463/150‑1 (MQ=255)                                              gTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGa                                                                                                   >  1:1342319/1‑150 (MQ=255)                                              gTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGa                                                                                                   >  2:870709/1‑150 (MQ=255)                                               tCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGaa                                                                                                  >  2:1281068/1‑150 (MQ=255)                                                  aTCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATc                                                                                               >  1:573310/1‑150 (MQ=255)                                                      aCCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGgca                                                                                                                                     >  2:838840/1‑108 (MQ=255)                                                      aCCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGgca                                                                                                                                     <  1:838840/108‑1 (MQ=255)                                                      aCCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGtt                                                                                           >  1:681927/1‑150 (MQ=255)                                                             gTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCGACCGCA‑CGCTGGTGTTgcccaacgtggcggtggccgagttgagcgggcagc                                                                                                             >  1:102692‑M2/1‑90 (MQ=255)                                                             gTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCGACCGCA‑CGCTGGTGTTgcccaacgtggcggtggccgagttgagcgggcagc                                                                                                             <  2:102692‑M2/125‑36 (MQ=255)                                                                   ggCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGATGCTGACCCAGCAGGCTGCTGCACTGGCCGGAAATCAGTTCAAGCATGGGCCt                                                                              >  2:50286/1‑150 (MQ=255)                                                                      ggggTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGc                                                                           <  2:292326/150‑1 (MQ=255)                                                                           cGCCATGCTGGCACCCCAGGTTACCCTGCCTGCTCAACTCGGCCAGCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCaa                                                                      <  2:822130/150‑1 (MQ=255)                                                                            gCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATggg                                                                                 <  1:1798987/138‑1 (MQ=255)                                                                            gCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATggg                                                                                 >  2:1798987/1‑138 (MQ=255)                                                                             ccATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATg                                                                    >  1:451070/1‑150 (MQ=255)                                                                               aTGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATggg                                                                  <  2:1486117/150‑1 (MQ=255)                                                                               aTGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATggg                                                                  >  1:1486117/1‑150 (MQ=255)                                                                               aTGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATggg                                                                  >  2:1211594/1‑150 (MQ=255)                                                                               aTGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATggg                                                                  <  1:1870642/150‑1 (MQ=255)                                                                                tGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCgcc                                                                                                                                             <  2:1344754‑M2/74‑4 (MQ=255)                                                                                tGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCgcc                                                                                                                                             >  1:1344754‑M2/1‑71 (MQ=255)                                                                                tGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGc                                                                 <  1:846534/150‑1 (MQ=255)                                                                                tGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGc                                                                 <  1:657997/150‑1 (MQ=255)                                                                                    ggCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATg                                                             >  2:1362610/1‑150 (MQ=255)                                                                                     gCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGgca                                                                                                                                     >  1:145901/1‑77 (MQ=255)                                                                                     gCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGgca                                                                                                                                     <  2:145901/77‑1 (MQ=255)                                                                                        ccccAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGctct                                                         <  1:1248752/148‑1 (MQ=255)                                                                                        cacCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGctct                                                         >  1:1527908/1‑150 (MQ=255)                                                                                        cacCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGctct                                                         <  2:1488842/150‑1 (MQ=255)                                                                                              gTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGtt                                                                                           >  1:1056574/1‑110 (MQ=255)                                                                                              gTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGtt                                                                                           <  2:1056574/110‑1 (MQ=255)                                                                                                          gCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGctct                                                         >  2:750111/1‑132 (MQ=255)                                                                                                          gCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGctct                                                         <  1:750111/132‑1 (MQ=255)                                                                                                           cTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTCCTg                                      <  1:518996/150‑1 (MQ=255)                                                                                                           cTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTCCTg                                      <  1:519008/150‑1 (MQ=255)                                                                                                                 tCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTgcgc                                                                                                           >  1:802295/1‑75 (MQ=255)                                                                                                                 tCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTgcgc                                                                                                           <  2:802295/75‑1 (MQ=255)                                                                                                                     ccACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTCCTGGTACGGCTTg                            <  1:1281068/150‑1 (MQ=255)                                                                                                                       aCCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGctct                                                         >  2:198079/1‑119 (MQ=255)                                                                                                                       aCCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGctct                                                         <  1:198079/119‑1 (MQ=255)                                                                                                                              cGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGAAACAGCGCGGTCAGGCTGATGCGGTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGTCGATGCTCTGCAACAGCAGCGATTCCTGGTACGGCTTGCCCAGGTAt                   <  2:406447/150‑1 (MQ=255)                                                                                                                                  gggCAACACCA‑GCGTGCGGTCgcccaacgtggcggtggccgagttgagcgggcagcgtaacctggtgtgccagcatggcgaccccgcctggcacctggggtggatcgactggcgtcagcaacgcctgccgttgatcggtttcgaggccgc               >  1:887304‑M2/1‑21 (MQ=255)                                                                                                                                     cAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTCCTGGTACGGCTTGCCCAGGTATTCGTTGa            <  2:455142/150‑1 (MQ=255)                                                                                                                                      aaCACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTCCTGGTACGGCTTGCCCAGGTATTCGTTGAc           >  2:1521774/1‑150 (MQ=255)                                                                                                                                            a‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTcc                                        <  2:250017/115‑1 (MQ=255)                                                                                                                                            a‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTcc                                        >  1:250017/1‑115 (MQ=255)                                                                                                                                              gCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTCCTGGTACGGCTTGCCCAGGTATTCGTTGACGCCGATg    <  1:1273095/150‑1 (MQ=255)                                                                                                                                                gTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTCCTGGTACGGTTTGCCCAGGTATTCGTTGACGCCGATGGc  <  1:214580/150‑1 (MQ=255)                                                                                                                                                    ggTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATgg                                                                                  >  2:286982/1‑66 (MQ=255)                                                                                                                                                    ggTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATgg                                                                                  <  1:286982/66‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                               GCACGCGGCCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCA‑GCGTGCGGTCGCCCAACGGCAGCAACAGCCCGGTCAGGCTGCTGCGCTGGCCGGAAATCAGTTCAAGCATGGGCCTGGCTCCAATGGGCGATGCTCTGCAACAGCAGCGATTCCTGGTACGGCTTGCCCAGGTATTCGTTGACGCCGATGGC  >  NC_002947/5681806‑5682097

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.