New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 619244 =96 (1.320)5 (0.070) 4/236 NT 5.1% coding (757/1329 nt) pfeS‑I histidine kinase
?NC_002947 619271 = 96 (1.380)coding (730/1329 nt) pfeS‑I histidine kinase

Only 100 of 120 total aligned reads displayed.

CACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCTGCAGGGG  >  NC_002947/619095‑619391
                                                                                                                                                     |                                                                                                                                                   
ggccgatgatctggacagccccgccctgcccctgcaggagcggcgtgatgagctgggtgagctggctcaggccttcgagcacatggccgggcgcctgcgccagagccttgagcaacagcgcctgctgttgcgcacgctgtctcacgaatt                                                                                                                                                     >  2:1806810‑M1/150‑150 (MQ=255)
  ccgatgatctggacagccccgccctgcccctgcaggagcggcgtgatgagctgggtgagctggctcaggccttcgagcacatggccgggcgcctgcgccagagccttgagcaacagcgcctgctgttgcgcacgctgtctcacgaatTgc                                                                                                                                                   >  2:1605448‑M1/148‑150 (MQ=255)
  ccAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATgc                                                                                                                                                   <  2:1454324/150‑1 (MQ=255)
   cgatgatctggacagccccgccctgcccctgcaggagcggcgtgatgagctgggtgagctggctcaggccttcgagcacatggccgggcgcctgcgccagagccttgagcaacagcgcctgctgttgcgcacgctgtctcacgaatTgcg                                                                                                                                                  >  2:1059514‑M1/147‑150 (MQ=255)
     atgatctggacagccccgccctgcccctgcaggagcggcgtgatgagctgggtgagctggctcaggccttcgagcacatggccgggcgcctgcgccagagccttgagcaacagcgcctgctgttgcgcacgctgtctcacgaatTGCGCa                                                                                                                                                >  1:60442‑M1/145‑150 (MQ=255)
       aCCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCacg                                                                                                                                              >  2:259500/1‑148 (MQ=255)
          ggCTCGGTCACCAGGCTGGGCTGTTCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCcgc                                                                                                                                           <  2:1328304/150‑1 (MQ=255)
           cctgggTCAGCAGGCTGGGCTGTTCGGTGTCCATCCAGGCCAGGTCGGGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCcgcg                                                                                                                                          >  2:605240/5‑150 (MQ=255)
             tCGGTCACCAGGCTGGGCTGTTCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGcc                                                                                                                                        >  1:1840838/1‑150 (MQ=255)
                   aCCAGGCTGGGCTGTTCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAgcggc                                                                                                                                  >  1:458109/1‑150 (MQ=255)
                   aCCAGGCTGGGCTGTTCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAgcggc                                                                                                                                  >  2:961969/1‑150 (MQ=255)
                       ccctgcccctgcaggagcggcgtgatgagctgggtgagctggctcaggccttcgagcacatggccgggcgcctgcgccagagccttgagcaacagcgcctgctgttgcgcacgctgtctcacgaatTGCGCAGCCGCGCCAGCGGCGTgc                                                                                                                              >  2:588781‑M1/127‑150 (MQ=255)
                        gctgggctgTTCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGTGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTgcg                                                                                                                             <  2:1864525/150‑1 (MQ=255)
                             gctgTTCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAAtt                                                                                                                        >  1:1028583/1‑150 (MQ=255)
                                gTTCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGt                                                                                                                     <  2:1900735/150‑1 (MQ=255)
                                  tCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGGCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTga                                                                                                                   <  2:1919711/150‑1 (MQ=255)
                                   cGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTgag                                                                                                                  >  1:642634/1‑150 (MQ=255)
                                     gtgtCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTc                                                                                                                       <  1:1030142/143‑1 (MQ=255)
                                           atccaGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATgc                                                                                                                                                   >  2:475343/1‑109 (MQ=255)
                                           atccaGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATgc                                                                                                                                                   <  1:475343/109‑1 (MQ=255)
                                           atccaGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTgagagatcgga                                                                                                          >  2:1492855/1‑143 (MQ=255)
                                           atccaGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTg                                                                                                          >  1:116422/1‑150 (MQ=255)
                                            tccaGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTgc                                                                                                         >  2:774224/1‑150 (MQ=255)
                                              caggccaggTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTgagc                                                                                                       <  2:1840838/150‑1 (MQ=255)
                                                      gTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAAcagcag                                                                                               >  1:1203307/1‑150 (MQ=255)
                                                       tCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAgg                                                                                              <  2:1415337/150‑1 (MQ=255)
                                                          aGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGgcgc                                                                                           >  1:328293/1‑150 (MQ=255)
                                                           gggTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCCGAGGAGTGAGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCt                                                                                          >  2:1424199/1‑150 (MQ=255)
                                                           gggTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCt                                                                                          <  1:13823/150‑1 (MQ=255)
                                                              tgtTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGtt                                                                                       <  2:642634/150‑1 (MQ=255)
                                                                ttttCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGgcgc                                                                                           <  2:1320022/144‑1 (MQ=255)
                                                                ttttCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTAGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGgcgc                                                                                           >  1:1320022/1‑144 (MQ=255)
                                                                    ccAGCAGCTTCTGACTGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCaa                                                                                 <  2:1321190/150‑1 (MQ=255)
                                                                     cagcagCTTCTGCATGTCGGCTACCTCCCGGTCCGGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCACCAGCAGGCGCTGTTGCTCAAg                                                                                >  1:154619/1‑150 (MQ=255)
                                                                     cagcagCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTTATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAg                                                                                >  2:491389/1‑150 (MQ=255)
                                                                      agcagcTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGt                                                                                                                     >  2:1336208/1‑112 (MQ=255)
                                                                      agcagcTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGt                                                                                                           >  2:773400/1‑122 (MQ=255)
                                                                      agcagcTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGt                                                                                                           <  1:773400/122‑1 (MQ=255)
                                                                       gcagcTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGc                                                                              >  1:1553340/1‑150 (MQ=255)
                                                                              cTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGgcg                                                                       >  2:1041459/1‑150 (MQ=255)
                                                                                 cATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAAca                                                                                                   >  2:313478/1‑119 (MQ=255)
                                                                                 cATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAAca                                                                                                   <  1:313478/119‑1 (MQ=255)
                                                                                     tCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGgcgc                                                                <  2:1013111/150‑1 (MQ=255)
                                                                                       ggCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGccc                                                              >  2:1712177/1‑150 (MQ=255)
                                                                                            ccTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCa                                                         >  2:1072518/1‑150 (MQ=255)
                                                                                             cTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAt                                                        <  2:458109/150‑1 (MQ=255)
                                                                                             cTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAt                                                        <  2:328293/150‑1 (MQ=255)
                                                                                              tCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAtg                                                       >  1:983710/1‑150 (MQ=255)
                                                                                              tCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAtg                                                       >  2:761332/1‑150 (MQ=255)
                                                                                              tCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAtg                                                       <  2:404882/150‑1 (MQ=255)
                                                                                              tCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAtg                                                       >  2:356958/1‑150 (MQ=255)
                                                                                              tCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAtg                                                       >  1:455048/1‑150 (MQ=255)
                                                                                               cACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAtgt                                                      >  1:308720/1‑150 (MQ=255)
                                                                                                  ggTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCt                                                   <  1:961969/150‑1 (MQ=255)
                                                                                                      cAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAAc                                                                                                    >  1:133359/1‑97 (MQ=255)
                                                                                                      cAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAAc                                                                                                    <  2:133359/97‑1 (MQ=255)
                                                                                                      cAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGaa                                               >  1:727544/1‑150 (MQ=255)
                                                                                                      cAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGaa                                               <  1:356958/150‑1 (MQ=255)
                                                                                                        ggCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGt                                                                                                                     >  1:1381922/1‑78 (MQ=255)
                                                                                                        ggCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGt                                                                                                                     <  2:1381922/78‑1 (MQ=255)
                                                                                                        ggCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAgg                                             >  2:96450/1‑150 (MQ=255)
                                                                                                        ggCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAgg                                             >  1:773195/1‑150 (MQ=255)
                                                                                                          cttgagcaacagcgcctgctgttgcgcacgctgtctcacgaatTGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGt                                                                                                                     <  1:1720186‑M1/33‑1 (MQ=255)
                                                                                                           gcTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCt                                          >  2:498345/1‑150 (MQ=255)
                                                                                                            cTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTg                                         >  2:252428/1‑150 (MQ=255)
                                                                                                             gagcaacagcgcctgctgttgcgcacgctgtctcacgaatTGCGCAGCCGCGCCAGCGGCGTgc                                                                                                                              <  1:10937‑M1/24‑1 (MQ=255)
                                                                                                             gagcaacagcgcctgctgttgcgcacgctgtctcacgaatTGCGCAGCCGCGCCAGCGGCGTgc                                                                                                                              >  2:10937‑M1/41‑64 (MQ=255)
                                                                                                                 gcAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCa                                    >  2:1356413/1‑150 (MQ=255)
                                                                                                                 gcAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCa                                    >  2:1223591/1‑150 (MQ=255)
                                                                                                                  cAGCTGCGGCGGTGGCAAGTCGCTGTCTTGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAg                                   <  1:887193/150‑1 (MQ=255)
                                                                                                                  cAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGTCAg                                   <  2:308720/150‑1 (MQ=255)
                                                                                                                  cAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAg                                   <  1:484054/150‑1 (MQ=255)
                                                                                                                      tGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCa                               >  2:1630974/1‑150 (MQ=255)
                                                                                                                        cggcggTGTCAAGTCGCTGTCATGGGTGTTGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGGAACAGCAGGCGGTTTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCAcc                             <  2:228968/150‑1 (MQ=255)
                                                                                                                        cggcggTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCAcc                             <  1:1041459/150‑1 (MQ=255)
                                                                                                                           cggTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAg                          <  2:455048/150‑1 (MQ=255)
                                                                                                                               ggCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGt                                                                                        <  1:841688/84‑1 (MQ=255)
                                                                                                                               ggCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGt                                                                                        >  2:841688/1‑84 (MQ=255)
                                                                                                                                 cAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAACTGCTCGAAGGCCTGAGCCAGCTCACCCAGCtcatc                    <  1:1424199/150‑1 (MQ=255)
                                                                                                                                  aaGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAAtt                                                                                                                        >  2:1835818/1‑49 (MQ=255)
                                                                                                                                  aaGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAAtt                                                                                                                        <  1:1835818/49‑1 (MQ=255)
                                                                                                                                  aaGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCAccc                            <  2:1583379/141‑1 (MQ=255)
                                                                                                                                  aaGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGAGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCAccc                            >  1:1583379/1‑141 (MQ=255)
                                                                                                                                    gTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCAcg                 >  2:680923/1‑150 (MQ=255)
                                                                                                                                    gTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCAcg                 >  1:143165/1‑150 (MQ=255)
                                                                                                                                     tCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCAcgc                >  1:1619779/1‑150 (MQ=255)
                                                                                                                                        cTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCAcgccgc             >  1:1761171/1‑150 (MQ=255)
                                                                                                                                        cTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCAcgccgc             <  2:1619779/150‑1 (MQ=255)
                                                                                                                                          gTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTc           <  1:1072518/150‑1 (MQ=255)
                                                                                                                                             aTGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCTg        >  2:1248899/1‑150 (MQ=255)
                                                                                                                                             aTGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCTg        >  2:154125/1‑150 (MQ=255)
                                                                                                                                               gggCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCTgca      <  1:154125/150‑1 (MQ=255)
                                                                                                                                                gtcGATGCGCAGCCGCGCCAGCGAAGTGCACCAATAGTGAGATAGTGTGGTTTACATCAGTCTCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCTgcag     <  2:1773115/148‑1 (MQ=255)
                                                                                                                                                ggCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCTgcag     <  1:491389/150‑1 (MQ=255)
                                                                                                                                                ggCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCTgcag     <  1:1483309/150‑1 (MQ=255)
                                                                                                                                                ggCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCTgcag     <  2:116422/150‑1 (MQ=255)
                                                                                                                                                ggCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAAGCCGGAGCCAGCTCACCCAGCTCATCACGCCGCTCCTgcag     >  1:1773115/1‑150 (MQ=255)
                                                                                                                                                 gCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAt                                                        <  1:1332490/98‑1 (MQ=255)
                                                                                                                                                 gCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAt                                                        >  2:1332490/1‑98 (MQ=255)
                                                                                                                                                   gATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGCACCTGCGTGCTCAACTTCAGGCGCTGTTTCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCTgcagggg  <  1:435917/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCTGCAGGGG  >  NC_002947/619095‑619391

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.