New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 619244 =96 (1.320)5 (0.070) 4/236 NT 5.1% coding (757/1329 nt) pfeS‑I histidine kinase
?NC_002947 619271 = 96 (1.380)coding (730/1329 nt) pfeS‑I histidine kinase

Only 100 of 121 total aligned reads displayed.

GCTGTTCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑GCAGGGGCAGGGCGGGGCTGTCCAGATCATCGGCC  >  NC_002947/619124‑619419
                                                                                                                                                   |                                                                                                                                                     
gctgTTCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAAtt                                                                                                                                                     >  1:1028583/1‑150 (MQ=255)
   gTTCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGt                                                                                                                                                  <  2:1900735/150‑1 (MQ=255)
    ttCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTg                                                                                                                                                 <  1:539785/150‑1 (MQ=255)
     tCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGGTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTgc                                                                                                                                                <  2:1330747/150‑2 (MQ=255)
     tCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGGCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTga                                                                                                                                                <  2:1919711/150‑1 (MQ=255)
      cGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTgag                                                                                                                                               >  1:642634/1‑150 (MQ=255)
        gtgtCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTc                                                                                                                                                    <  1:1030142/143‑1 (MQ=255)
        gtgtCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTc                                                                                                                                                    >  2:1030142/1‑143 (MQ=255)
        gtgtCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGAc                                                                                                                                             >  2:13823/1‑150 (MQ=255)
              atccaGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTgagagatcgga                                                                                                                                       >  2:1492855/1‑143 (MQ=255)
               tccaGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTgc                                                                                                                                      >  2:774224/1‑150 (MQ=255)
                 caggccaggTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTgagc                                                                                                                                    <  2:1840838/150‑1 (MQ=255)
                         gTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAAcagcag                                                                                                                            >  1:1203307/1‑150 (MQ=255)
                          tCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAgg                                                                                                                           <  2:1415337/150‑1 (MQ=255)
                              gggTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCt                                                                                                                       <  1:13823/150‑1 (MQ=255)
                                gtgtTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGt                                                                                                                     >  1:189493/1‑150 (MQ=255)
                                 tgtTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGtt                                                                                                                    <  2:642634/150‑1 (MQ=255)
                                   ttttCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGgcgc                                                                                                                        <  2:1320022/144‑1 (MQ=255)
                                   ttttCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTAGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGgcgc                                                                                                                        >  1:1320022/1‑144 (MQ=255)
                                       ccAGCAGCTTCTGACTGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCaa                                                                                                              <  2:1321190/150‑1 (MQ=255)
                                        cagcagCTTCTGCATGTCGGCTACCTCCCGGTCCGGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCACCAGCAGGCGCTGTTGCTCAAg                                                                                                             >  1:154619/1‑150 (MQ=255)
                                        cagcagCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTTATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAg                                                                                                             >  2:491389/1‑150 (MQ=255)
                                         agcagcTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGt                                                                                                                                                  <  1:1336208/112‑1 (MQ=255)
                                         agcagcTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGt                                                                                                                                        >  2:773400/1‑122 (MQ=255)
                                         agcagcTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGt                                                                                                                                        <  1:773400/122‑1 (MQ=255)
                                          gcagcTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGc                                                                                                           >  1:1553340/1‑150 (MQ=255)
                                                 cTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGgcg                                                                                                    >  2:1041459/1‑150 (MQ=255)
                                                    cATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAAca                                                                                                                                >  2:313478/1‑119 (MQ=255)
                                                    cATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAAca                                                                                                                                <  1:313478/119‑1 (MQ=255)
                                                        tCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGgcgc                                                                                             <  2:1013111/150‑1 (MQ=255)
                                                          ggCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGccc                                                                                           >  2:1712177/1‑150 (MQ=255)
                                                              aCCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGcc                                                                                       >  2:1207945/1‑150 (MQ=255)
                                                               gatCACAGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAACGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCACTGGCGAAGGCGCCCGGCCa                                                                                      >  2:42500/3‑150 (MQ=255)
                                                                cTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAt                                                                                     <  2:328293/150‑1 (MQ=255)
                                                                cTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAt                                                                                     <  2:458109/150‑1 (MQ=255)
                                                                 tCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAtg                                                                                    >  1:455048/1‑150 (MQ=255)
                                                                 tCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAtg                                                                                    >  1:983710/1‑150 (MQ=255)
                                                                 tCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAtg                                                                                    >  2:356958/1‑150 (MQ=255)
                                                                 tCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAtg                                                                                    >  2:761332/1‑150 (MQ=255)
                                                                  cACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAtgt                                                                                   >  1:308720/1‑150 (MQ=255)
                                                                         cAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAAc                                                                                                                                 <  2:133359/97‑1 (MQ=255)
                                                                         cAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGaa                                                                            <  1:356958/150‑1 (MQ=255)
                                                                         cAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGaa                                                                            >  1:727544/1‑150 (MQ=255)
                                                                           ggCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGt                                                                                                                                                  >  1:1381922/1‑78 (MQ=255)
                                                                           ggCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGt                                                                                                                                                  <  2:1381922/78‑1 (MQ=255)
                                                                           ggCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAgg                                                                          >  2:96450/1‑150 (MQ=255)
                                                                             cttgagcaacagcgcctgctgttgcgcacgctgtctcacgaatTGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGt                                                                                                                                                  >  2:1720186‑M1/44‑76 (MQ=255)
                                                                             cttgagcaacagcgcctgctgttgcgcacgctgtctcacgaatTGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGt                                                                                                                                                  <  1:1720186‑M1/33‑1 (MQ=255)
                                                                              gcTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCt                                                                       >  1:151095/1‑150 (MQ=255)
                                                                               cTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTg                                                                      >  2:252428/1‑150 (MQ=255)
                                                                                    gcAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCa                                                                 >  2:1223591/1‑150 (MQ=255)
                                                                                    gcAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCa                                                                 >  2:1356413/1‑150 (MQ=255)
                                                                                     cAGCTGCGGCGGTGGCAAGTCGCTGTCTTGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAg                                                                <  1:887193/150‑1 (MQ=255)
                                                                                     cAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGTCAg                                                                <  2:308720/150‑1 (MQ=255)
                                                                                     cAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAg                                                                <  1:484054/150‑1 (MQ=255)
                                                                                     cAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAg                                                                >  1:439813/1‑150 (MQ=255)
                                                                                         tGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCa                                                            >  2:1630974/1‑150 (MQ=255)
                                                                                           cggcggTGTCAAGTCGCTGTCATGGGTGTTGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGGAACAGCAGGCGGTTTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCAcc                                                          <  2:228968/150‑1 (MQ=255)
                                                                                           cggcggTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCAcc                                                          <  1:1041459/150‑1 (MQ=255)
                                                                                              cggTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAg                                                       <  2:455048/150‑1 (MQ=255)
                                                                                                 tGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCtc                                                    >  1:1666975/1‑150 (MQ=255)
                                                                                                  ggCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGt                                                                                                                     <  1:841688/84‑1 (MQ=255)
                                                                                                  ggCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGt                                                                                                                     >  2:841688/1‑84 (MQ=255)
                                                                                                    cAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAACTGCTCGAAGGCCTGAGCCAGCTCACCCAGCtcatc                                                 <  1:1424199/150‑1 (MQ=255)
                                                                                                     aaGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAAtt                                                                                                                                                     <  1:1835818/49‑1 (MQ=255)
                                                                                                     aaGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAAtt                                                                                                                                                     >  2:1835818/1‑49 (MQ=255)
                                                                                                       gTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCAcg                                              >  2:680923/1‑150 (MQ=255)
                                                                                                       gTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCAcg                                              >  1:143165/1‑150 (MQ=255)
                                                                                                        tCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCAcgc                                             >  1:1619779/1‑150 (MQ=255)
                                                                                                          gCTGTCATGGGCGATGTGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCAGAGCGGAAGAGCGATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCAcgccg                                           >  2:543183/1‑150 (MQ=255)
                                                                                                           cTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCAcgccgc                                          <  2:1619779/150‑1 (MQ=255)
                                                                                                             gTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTc                                        <  1:1072518/150‑1 (MQ=255)
                                                                                                                aTGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑g                                    >  2:154125/1‑150 (MQ=255)
                                                                                                                aTGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑g                                    >  2:1248899/1‑150 (MQ=255)
                                                                                                                  gggCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑gca                                  <  1:154125/150‑1 (MQ=255)
                                                                                                                  acgaattgcgcacgccgctggcgcggctgcgcaATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAg                                                                                                             <  1:1720186‑M2/43‑1 (MQ=255)
                                                                                                                   gtcGATGCGCAGCCGCGCCAGCGAAGTGCACCAATAGTGAGATAGTGTGGTTTACATCAGTCTCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑gcag                                 <  2:1773115/148‑1 (MQ=255)
                                                                                                                   ggCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑gcag                                 <  2:116422/150‑1 (MQ=255)
                                                                                                                   ggCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAAGCCGGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑gcag                                 >  1:1773115/1‑150 (MQ=255)
                                                                                                                    gCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAt                                                                                     >  2:1332490/1‑98 (MQ=255)
                                                                                                                    gCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCAt                                                                                     <  1:1332490/98‑1 (MQ=255)
                                                                                                                      gATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGCACCTGCGTGCTCAACTTCAGGCGCTGTTTCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑gcagggg                              <  1:435917/150‑1 (MQ=255)
                                                                                                                         GCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑gcaggggcag                           <  1:1527498‑M1/150‑1 (MQ=255)
                                                                                                                           gcacgccgctggcgcggctgcgcaATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTc                                                                                                                <  1:10937‑M2/40‑1 (MQ=255)
                                                                                                                           gcacgccgctggcgcggctgcgcaATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTc                                                                                                                >  2:10937‑M2/25‑64 (MQ=255)
                                                                                                                           gcacgccgctggcgcggctgcgcaATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑gcaggggcaggg                         >  2:588781‑M2/25‑150 (MQ=255)
                                                                                                                           GCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGGGCCAGCTCACCCAGCtcatc                                                 >  1:1292280‑M1/1‑127 (MQ=255)
                                                                                                                           GCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑gcaggggcaggg                         <  2:1813841‑M1/150‑1 (MQ=255)
                                                                                                                              gCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑GCAGGGGCAGGGCgg                      >  2:336816/1‑150 (MQ=255)
                                                                                                                              gCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑GCAGGGGCAGGGCgg                      <  2:439813/150‑1 (MQ=255)
                                                                                                                                cgcgCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAGGGCCTGATCCAGCTCACCCAGCTCATCACGCCGCTCCT‑GCAGGGGCAGGGCgggg                    <  1:1207945/150‑1 (MQ=255)
                                                                                                                                       gcggcgTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑GCAGGGGCAGGGCGGGGCTGTCCa             <  2:151095/150‑1 (MQ=255)
                                                                                                                                         ggcgTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑GCAGGGGCAGGGCGGGGCTGTCCAGa           <  2:1553340/150‑1 (MQ=255)
                                                                                                                                          gcgTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCC‑CGCTTGGCTGGGGCAGGGCGGGGCTGTCCAGat          <  1:543183/150‑1 (MQ=255)
                                                                                                                                             tgcgcaATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑GCAGGGGCAGGGCGGGGCTGTCCAGatcat       >  1:60442‑M2/7‑150 (MQ=255)
                                                                                                                                             tgcgcaATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑GCAGGGGCAGGGCGGGGCTGTCCAGatcat       >  2:1575446‑M2/7‑150 (MQ=255)
                                                                                                                                               cgcaATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑GCAGGGGCAGGGCGGGGCTGTCCAGATCATCg     >  2:1059514‑M2/5‑150 (MQ=255)
                                                                                                                                                gcaATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑GCAGGGGCAGGGCGGGGCTGTCCAGATCATCgg    >  1:774388‑M2/4‑150 (MQ=255)
                                                                                                                                                gcaATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑GCAGGGGCAGGGCGGGGCTGTCCAGATCATCgg    >  2:1605448‑M2/4‑150 (MQ=255)
                                                                                                                                                  aATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑GCAGGGGCAGGGCGGGGCTGTCCAGATCATCGGcc  >  2:1806810‑M2/2‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GCTGTTCGGTGTCCATCCAGGCCAGGTCGAGGGTGTTTTCCAGCAGCTTCTGCATGTCGGCTACCTCACGGTCCAGGCGCTCGCGCAGCTGCGGCGGTGGCAAGTCGCTGTCATGGGCGATGCGCAGCCGCGCCAGCGGCGTGCGCAATTCGTGAGACAGCGTGCGCAACAGCAGGCGCTGTTGCTCAAGGCTCTGGCGCAGGCGCCCGGCCATGTGCTCGAAGGCCTGAGCCAGCTCACCCAGCTCATCACGCCGCTCCT‑GCAGGGGCAGGGCGGGGCTGTCCAGATCATCGGCC  >  NC_002947/619124‑619419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.