New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4990744	88 (1.210)	6 (0.080)	6/244	NT	6.0%	coding (436/1242 nt)	PP_4399	glutamine synthetase
	?	NC_002947	= 4990763	101 (1.410)					coding (417/1242 nt)	PP_4399	glutamine synthetase

GAGCAGGTGCTTGAACAGGAAGGTCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGTGGTACACCTCCTTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4990595‑4990744 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCAACGGCCTGC‑GCCCGTTCTTCAAGGAGGTGTACCACTGCATGGCCGCGCTCGGCCTGCCACGTGACACCTTCATGCACGAAATGGGTGTCAGCCAGTTCGAGATCAACCTGCTGCACGGCGACCCGCTG  <  NC_002947/4990763‑4990634                                                                                                                                                                                                                                                                                           GAGCAGGTGCTTGAACAGGAAGGTCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGTGGTACACCTCCTTGAA                                                                                                                                     <  1:1234910/150‑1                       GTCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGTGGTACACCTCCTTGAACAACGGCCTGC‑GCCCGTTCTTC                                                                                                              <  1:679414/150‑1                                                                                                   AGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGTGGTACACCTCCTTGAAGAACGGCCTGC‑GCCCGTTCTTCAAG                                                                                                           <  1:262717/77‑1                                                                                                   AGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGTGGTACACCTCCTTGAAGAACGGCCTGC‑GCCCGTTCTTCAAG                                                                                                           >  2:262717/1‑77                                                                                                                   GCCGAGCGCGGCCATGCAGTGGTACACCTCCTTGAACAACGGCCTGC‑GCCCGTTCTTCAA                                                                                                            >  1:1777724/1‑60                                                                                                                   GCCGAGCGCGGCCATGCAGTGGTACACCTCCTTGAACAACGGCCTGC‑GCCCGTTCTTCAA                                                                                                            <  2:1777724/60‑1                                                                                                                                   CAGTGGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTCAAGGAGGTGTACCACTGCATGGCCGCGCTCGGCCTGCCACGTGACACCTTCATGCACGAAATGGGTGTCAGCCAGTTCGAGATCAACCTGCTGCACGGCGACCCGCTG  >  2:857510/1‑150                                                                                                                                                                                                                                                                                           GAGCAGGTGCTTGAACAGGAAGGTCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGTGGTACACCTCCTTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4990595‑4990744 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCAACGGCCTGC‑GCCCGTTCTTCAAGGAGGTGTACCACTGCATGGCCGCGCTCGGCCTGCCACGTGACACCTTCATGCACGAAATGGGTGTCAGCCAGTTCGAGATCAACCTGCTGCACGGCGACCCGCTG  <  NC_002947/4990763‑4990634

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.