New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 499074488 (1.210)6 (0.080) 6/244 NT 6.0% coding (436/1242 nt) PP_4399 glutamine synthetase
?NC_002947 = 4990763 101 (1.410)coding (417/1242 nt) PP_4399 glutamine synthetase

Only 100 of 107 total aligned reads displayed.

GAGCAGGTGCTTGAACAGGAAGGTCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCG  >  NC_002947/4990595‑4990893
                                                                                                                                                      |                                                                                                                                                      
gAGCAGGTGCTTGAACAGGAAGGTCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAA                                                                                                                                                        <  1:1234910‑M1/150‑1 (MQ=255)
      gTGCTTGAACAGGAAGGTCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACgg                                                                                                                                                  >  1:1131926/1‑150 (MQ=255)
      gTGCTTGAACAGGAAGGTCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑CGCACACCTCCTTGAAGAACgg                                                                                                                                                  <  1:476816/150‑1 (MQ=255)
        gCTTGAACAGGAAGGTCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGAAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGCGTCAAGTGGCAGGCCGACCGCGGCCATGCAGT‑GGTACACCTCCTTGACGACCGGgc                                                                                                                                                >  1:498994/1‑150 (MQ=255)
           tGAACAGGAAGGTCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACgg                                                                                                                                                  >  2:1338644/1‑145 (MQ=255)
           tGAACAGGAAGGTCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACgg                                                                                                                                                  <  1:1338644/145‑1 (MQ=255)
                aGGAAGGTCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCg                                                                                                                                       >  2:237258/1‑150 (MQ=255)
                  gAAGGTCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCACGCGAT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCgtt                                                                                                                                     >  1:1556560/1‑150 (MQ=255)
                      gTCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAcaacggcctgcgcccgttcttc                                                                                                                                  <  1:679414‑M1/150‑23 (MQ=255)
                       tCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAAc                                                                                                                                                    >  1:1872273/1‑131 (MQ=255)
                       tCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAAc                                                                                                                                                    <  2:1872273/131‑1 (MQ=255)
                           gTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACt                                                                                                                            >  1:683631/1‑150 (MQ=255)
                           gTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACt                                                                                                                            >  1:1123794/1‑150 (MQ=255)
                                ccacgagcagcGGGGCGGCGTGTAGCAGGTGTATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGacac                                                                                                                       >  2:1682972/6‑150 (MQ=255)
                                ccAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGacac                                                                                                                       >  2:148957/1‑150 (MQ=255)
                                  aaCAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTg                                                                                                                     >  1:1520056/1‑150 (MQ=255)
                                     agcagcGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAAc                                                                                                                  <  2:1136643/150‑1 (MQ=255)
                                       cagcGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGc                                                                                                                >  2:1792919/1‑150 (MQ=255)
                                       cagcGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAACAACGGCCTGC‑GCCCGTTCttcaaggaggtgtaccactg                                                                                                                >  2:857510‑M2/1‑130 (MQ=255)
                                            ggTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAAt                                                                                                           <  1:1261250/150‑1 (MQ=255)
                                             gTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATg                                                                                                          >  2:1942278/1‑150 (MQ=255)
                                                  cGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCa                                                                                                     >  1:833065/1‑150 (MQ=255)
                                                        gcagGTTGATCTCGAACTGGGTGACACACATTTCGTGCATGAAGGTGTCACGTGGCAGGTCGATCGCGGCCATGCAGG‑GGTACATCTCCTTGAATAACGGGC‑GTAGGCCGTTGTTGGAACTGACCCTGAACGCCGAATGGCCCAGCTcgc                                                                                               <  2:705794/150‑1 (MQ=255)
                                                          agGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGCAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACGTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCgcgg                                                                                             <  1:1431869/150‑1 (MQ=255)
                                                            gTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCgcggcg                                                                                           >  1:76327/1‑150 (MQ=255)
                                                            gTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCgcggcg                                                                                           >  1:1048968/1‑150 (MQ=255)
                                                                  ctcGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATc                                                                                     <  2:833065/150‑1 (MQ=255)
                                                                     gAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCt                                                                                  >  1:304486/1‑150 (MQ=255)
                                                                     caaCTGGCTGACACCCATTTCGCGCCTGACGGTGCCACGTTGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCt                                                                                  <  2:802999/149‑1 (MQ=255)
                                                                      aaCTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTg                                                                                 <  2:560227/150‑1 (MQ=255)
                                                                       aCTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGc                                                                                <  2:76327/150‑1 (MQ=255)
                                                                         tGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCt                                                                              <  1:552300/150‑1 (MQ=255)
                                                                           gCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTAc                                                                            >  1:184095/1‑150 (MQ=255)
                                                                             tGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAAt                                                                                                           <  2:221974/117‑1 (MQ=255)
                                                                             tGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAg                                                                          >  1:1625011/1‑150 (MQ=255)
                                                                                 acCCATTTCGTGCATGAAGGTGTCCCATAGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAggcgg                                                                      >  1:542869/1‑150 (MQ=255)
                                                                                 acCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAGCGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAggcgg                                                                      >  2:1846316/1‑150 (MQ=255)
                                                                                 acCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAggcgg                                                                      <  1:1347808/150‑1 (MQ=255)
                                                                                   ccATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAg                                                                                                                                           >  2:60470/1‑79 (MQ=255)
                                                                                   ccATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAg                                                                                                                                           <  1:60470/79‑1 (MQ=255)
                                                                                   ccATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCa                                                                    <  1:148957/150‑1 (MQ=255)
                                                                                   ccATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCGCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCa                                                                    >  2:1364638/1‑150 (MQ=255)
                                                                                          gTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGTGGGCAGGAACgg                                                             >  1:400482/1‑150 (MQ=255)
                                                                                           tGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACTCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGt                                                            <  1:237258/150‑1 (MQ=255)
                                                                                           tGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGt                                                            <  1:571555/150‑1 (MQ=255)
                                                                                             cATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATAGCTGCCTAAAGGAGGCAGGAAGGGTtg                                                          >  2:1079331/1‑150 (MQ=255)
                                                                                                gAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAATGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAgg                                                                         >  1:664311/1‑132 (MQ=255)
                                                                                                gAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAATGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAgg                                                                         <  2:664311/132‑1 (MQ=255)
                                                                                                  aGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAgaacggcctgcgcccgttcttcaag                                                                                                                               <  1:262717‑M1/77‑26 (MQ=255)
                                                                                                   ggTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GTTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGCCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCgg                                                    <  2:1123794/150‑1 (MQ=255)
                                                                                                       tCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCgg                                                    >  1:965559/1‑146 (MQ=255)
                                                                                                       tCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCg                                                <  2:1520056/150‑1 (MQ=255)
                                                                                                         aCGTGGCAGGCCGAGCGCGGCCAT‑CGGTGGGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGgt                                              >  1:1021460/1‑150 (MQ=255)
                                                                                                            tgcatggCCGCGCTCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGaa                                                                <  2:571310/124‑1 (MQ=255)
                                                                                                            tgcatggCCGCGCTCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGaa                                                                >  1:571310/6‑129 (MQ=255)
                                                                                                             ggCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCgg                                                    <  1:1342311/140‑1 (MQ=255)
                                                                                                             ggCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCgg                                                    >  2:1342311/1‑140 (MQ=255)
                                                                                                                aGGCCGAGCGCGGCCCTGCAGT‑GGTACACCTCCTCGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTgggg                                       <  2:1556560/150‑1 (MQ=255)
                                                                                                                aGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTgggg                                       <  1:1682972/150‑1 (MQ=255)
                                                                                                                 ggCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTggggg                                      >  2:23299/1‑150 (MQ=255)
                                                                                                                  gCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAcaacggcctgcgcccgttcttcaa                                                                                                                                <  2:1777724‑M1/60‑25 (MQ=255)
                                                                                                                  gCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAcaacggcctgcgcccgttcttcaa                                                                                                                                >  1:1777724‑M1/1‑36 (MQ=255)
                                                                                                                  gCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGc                                     <  1:1437757/150‑1 (MQ=255)
                                                                                                                    cGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCaa                                   >  2:1832708/1‑150 (MQ=255)
                                                                                                                     gAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTgg                                         <  1:1928385/143‑1 (MQ=255)
                                                                                                                     gAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCaaa                                  >  1:1702679/1‑150 (MQ=255)
                                                                                                                     gAGCGCGGCCATGAAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTgg                                         >  2:1928385/1‑143 (MQ=255)
                                                                                                                      aGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAg                                 <  2:1224427/150‑1 (MQ=255)
                                                                                                                      aGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCAGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAg                                 <  1:1309286/150‑1 (MQ=255)
                                                                                                                           ggCCATGCAGT‑GGTACACCTCCTTAAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATAGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACgaa                            >  2:1845077/1‑150 (MQ=255)
                                                                                                                             ccATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGtt                                           <  1:517555/133‑1 (MQ=255)
                                                                                                                             ccATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGtt                                           >  2:517555/1‑133 (MQ=255)
                                                                                                                             ccATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACgaaga                          >  1:353303/1‑150 (MQ=255)
                                                                                                                             ccATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACgaa                            <  1:173389/148‑1 (MQ=255)
                                                                                                                              cATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCgg                                                    >  2:224646/1‑123 (MQ=255)
                                                                                                                              cATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCgg                                                    <  1:224646/123‑1 (MQ=255)
                                                                                                                               aTGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGtt                                           >  2:1603276/1‑131 (MQ=255)
                                                                                                                               aTGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGtt                                           <  1:1603276/131‑1 (MQ=255)
                                                                                                                                tGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACt                       >  1:659367/1‑150 (MQ=255)
                                                                                                                                  cAGT‑GGTACACCTCCTTGAAgaacgggcgcaggccgttgttcaaggaggtgtaccactgcatggccgcgctcggcctgccacgtgacaccttcatgcacgaaatgggtgtcagccagttcgagatcaacctgctgcacggcgacccgctg                      >  2:857510‑M1/1‑20 (MQ=255)
                                                                                                                                   aGT‑GGTACGCCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATc                                                                                     >  2:573983/1‑85 (MQ=255)
                                                                                                                                   aGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATc                                                                                     <  1:573983/85‑1 (MQ=255)
                                                                                                                                   aGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCa                    >  1:253045/1‑150 (MQ=255)
                                                                                                                                        gTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTc                >  1:711152/1‑150 (MQ=255)
                                                                                                                                         tACACCTACTTGAAGAACGAGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCg               <  2:255480/150‑1 (MQ=255)
                                                                                                                                              ctcctTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGGAAGGACGAAGAACTCCAGCTCGGTTGc          >  1:1268519/1‑150 (MQ=255)
                                                                                                                                              ctcctTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGc          <  1:1079331/150‑1 (MQ=255)
                                                                                                                                              ctcctTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGc          >  2:1289707/1‑150 (MQ=255)
                                                                                                                                              ctcctTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGc          <  1:1289707/150‑1 (MQ=255)
                                                                                                                                                cctTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCa        <  1:1832708/150‑1 (MQ=255)
                                                                                                                                                cctTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGGTGCCa        >  2:292053/1‑150 (MQ=255)
                                                                                                                                                 ctTGAAGAACGGGC‑GCAGGCCGTTCttcaaggaggtgtaccactgcatggccgcgctcggcctgccacgtgacacct                                                                                >  2:262717‑M2/1‑25 (MQ=255)
                                                                                                                                                 ctTGAAGAACGGGC‑GCAGGCCGTTCttcaaggaggtgtaccactgcatggccgcgctcggcctgccacgtgacacct                                                                                <  1:262717‑M2/77‑53 (MQ=255)
                                                                                                                                                  ttGAAGAACGGGC‑GCAGGCCGTTGttcaaggaggtgtaccactgcatggccgcgctcggc                                                                                                <  2:1777724‑M2/60‑37 (MQ=255)
                                                                                                                                                  ttGAAGAACGGGC‑GCAGGCCGTTGttcaaggaggtgtaccactgcatggccgcgctcggc                                                                                                >  1:1777724‑M2/1‑24 (MQ=255)
                                                                                                                                                    gaagaaCGGGC‑GCAGGCCGTTGttcaaggaggtgtaccactgcatggccgcgctcggcctgccacgtgacaccttcatgcacgaaatgggtgtcagccagttcgagatcaacctgctgcacggcgacccgctgctgttggccgaccagac    <  1:679414‑M2/150‑129 (MQ=255)
                                                                                                                                                    gaagaaCGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTAc    <  1:23299/150‑1 (MQ=255)
                                                                                                                                                    gaagaaCGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCGACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCACAGACGAAGAACTGCAGCTCGGTTGCCACTAc    >  1:841366/1‑150 (MQ=255)
                                                                                                                                                      agaaCGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCg  >  2:1237814/1‑150 (MQ=255)
                                                                                                                                                      agaaCGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCg  >  1:907409/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
GAGCAGGTGCTTGAACAGGAAGGTCTGGTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCG  >  NC_002947/4990595‑4990893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.