New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 499074488 (1.210)6 (0.080) 6/244 NT 6.0% coding (436/1242 nt) PP_4399 glutamine synthetase
?NC_002947 = 4990763 101 (1.410)coding (417/1242 nt) PP_4399 glutamine synthetase

Only 100 of 109 total aligned reads displayed.

GTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCGGCGCCAGGCCCAGTGCC  >  NC_002947/4990622‑4990910
                                                                                                                                               |                                                                                                                                                   
gTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACt                                                                                                                                             >  1:1123794/1‑150 (MQ=255)
gTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACt                                                                                                                                             >  1:683631/1‑150 (MQ=255)
     ccacgagcagcGGGGCGGCGTGTAGCAGGTGTATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGacac                                                                                                                                        >  2:1682972/6‑150 (MQ=255)
       aaCAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTg                                                                                                                                      >  1:1520056/1‑150 (MQ=255)
          agcagcGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAAc                                                                                                                                   <  2:1136643/150‑1 (MQ=255)
            cagcGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGc                                                                                                                                 >  2:1792919/1‑150 (MQ=255)
            cagcGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAACAACGGCCTGC‑GCCCGTTCttcaaggaggtgtaccactg                                                                                                                                 >  2:857510‑M2/1‑130 (MQ=255)
                 ggTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAAt                                                                                                                            <  1:1261250/150‑1 (MQ=255)
                  gTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATg                                                                                                                           >  2:1942278/1‑150 (MQ=255)
                       cGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCa                                                                                                                      >  1:833065/1‑150 (MQ=255)
                           cagcagGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTc                                                                                                                  >  1:560227/1‑150 (MQ=255)
                             gcagGTTGATCTCGAACTGGGTGACACACATTTCGTGCATGAAGGTGTCACGTGGCAGGTCGATCGCGGCCATGCAGG‑GGTACATCTCCTTGAATAACGGGC‑GTAGGCCGTTGTTGGAACTGACCCTGAACGCCGAATGGCCCAGCTcgc                                                                                                                <  2:705794/150‑1 (MQ=255)
                               agGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGCAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACGTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCgcgg                                                                                                              <  1:1431869/150‑1 (MQ=255)
                                 gTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCgcggcg                                                                                                            >  1:76327/1‑150 (MQ=255)
                                 gTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCgcggcg                                                                                                            >  1:1048968/1‑150 (MQ=255)
                                       ctcGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATc                                                                                                      <  2:833065/150‑1 (MQ=255)
                                          gAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCt                                                                                                   >  1:304486/1‑150 (MQ=255)
                                          caaCTGGCTGACACCCATTTCGCGCCTGACGGTGCCACGTTGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCt                                                                                                   <  2:802999/149‑1 (MQ=255)
                                            aCTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGc                                                                                                 <  2:76327/150‑1 (MQ=255)
                                              tGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCt                                                                                               <  1:552300/150‑1 (MQ=255)
                                                gCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTAc                                                                                             >  1:184095/1‑150 (MQ=255)
                                                  tGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAAt                                                                                                                            <  2:221974/117‑1 (MQ=255)
                                                  tGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAAt                                                                                                                            >  1:221974/1‑117 (MQ=255)
                                                  tGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAg                                                                                           >  1:1625011/1‑150 (MQ=255)
                                                      acCCATTTCGTGCATGAAGGTGTCCCATAGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAggcgg                                                                                       >  1:542869/1‑150 (MQ=255)
                                                      acCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAGCGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAggcgg                                                                                       >  2:1846316/1‑150 (MQ=255)
                                                      acCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAggcgg                                                                                       <  1:1347808/150‑1 (MQ=255)
                                                        ccATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCa                                                                                     <  1:148957/150‑1 (MQ=255)
                                                        ccATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCGCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCa                                                                                     >  2:1364638/1‑150 (MQ=255)
                                                               gTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGTGGGCAGGAACgg                                                                              >  1:400482/1‑150 (MQ=255)
                                                                tGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACTCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGt                                                                             <  1:237258/150‑1 (MQ=255)
                                                                tGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGt                                                                             <  1:571555/150‑1 (MQ=255)
                                                                  cATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATAGCTGCCTAAAGGAGGCAGGAAGGGTtg                                                                           >  2:1079331/1‑150 (MQ=255)
                                                                     gAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAATGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAgg                                                                                          >  1:664311/1‑132 (MQ=255)
                                                                     gAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAATGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAgg                                                                                          <  2:664311/132‑1 (MQ=255)
                                                                        ggTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GTTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGCCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCgg                                                                     <  2:1123794/150‑1 (MQ=255)
                                                                            tCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCgg                                                                     >  1:965559/1‑146 (MQ=255)
                                                                            tCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCg                                                                 <  2:1520056/150‑1 (MQ=255)
                                                                              aCGTGGCAGGCCGAGCGCGGCCAT‑CGGTGGGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGgt                                                               >  1:1021460/1‑150 (MQ=255)
                                                                                 tgcatggCCGCGCTCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGaa                                                                                 <  2:571310/124‑1 (MQ=255)
                                                                                 tgcatggCCGCGCTCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGaa                                                                                 >  1:571310/6‑129 (MQ=255)
                                                                                  ggCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCgg                                                                     >  2:1342311/1‑140 (MQ=255)
                                                                                  ggCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCgg                                                                     <  1:1342311/140‑1 (MQ=255)
                                                                                     aGGCCGAGCGCGGCCCTGCAGT‑GGTACACCTCCTCGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTgggg                                                        <  2:1556560/150‑1 (MQ=255)
                                                                                     aGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTgggg                                                        <  1:1682972/150‑1 (MQ=255)
                                                                                      ggCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTggggg                                                       >  2:23299/1‑150 (MQ=255)
                                                                                         cGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCaa                                                    >  2:1832708/1‑150 (MQ=255)
                                                                                          gAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTgg                                                          <  1:1928385/143‑1 (MQ=255)
                                                                                          gAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCaaa                                                   >  1:1702679/1‑150 (MQ=255)
                                                                                           aGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAg                                                  <  2:1224427/150‑1 (MQ=255)
                                                                                           aGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCAGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAg                                                  <  1:1309286/150‑1 (MQ=255)
                                                                                                ggCCATGCAGT‑GGTACACCTCCTTAAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATAGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACgaa                                             >  2:1845077/1‑150 (MQ=255)
                                                                                                  ccATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGtt                                                            <  1:517555/133‑1 (MQ=255)
                                                                                                  ccATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGtt                                                            >  2:517555/1‑133 (MQ=255)
                                                                                                  ccATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACgaaga                                           >  1:353303/1‑150 (MQ=255)
                                                                                                  ccATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACgaa                                             >  2:173389/1‑148 (MQ=255)
                                                                                                  ccATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACgaa                                             <  1:173389/148‑1 (MQ=255)
                                                                                                   cATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCgg                                                                     >  2:224646/1‑123 (MQ=255)
                                                                                                   cATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCgg                                                                     <  1:224646/123‑1 (MQ=255)
                                                                                                    aTGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGtt                                                            <  1:1603276/131‑1 (MQ=255)
                                                                                                    aTGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGtt                                                            >  2:1603276/1‑131 (MQ=255)
                                                                                                     tGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACt                                        >  1:659367/1‑150 (MQ=255)
                                                                                                        aGT‑GGTACGCCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATc                                                                                                      >  2:573983/1‑85 (MQ=255)
                                                                                                             gTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTc                                 >  1:711152/1‑150 (MQ=255)
                                                                                                              tACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCg                                >  1:14755/1‑150 (MQ=255)
                                                                                                              tACACCTACTTGAAGAACGAGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCg                                <  2:255480/150‑1 (MQ=255)
                                                                                                                   ctcctTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGGAAGGACGAAGAACTCCAGCTCGGTTGc                           >  1:1268519/1‑150 (MQ=255)
                                                                                                                   ctcctTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGc                           >  2:1289707/1‑150 (MQ=255)
                                                                                                                   ctcctTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGc                           <  1:1289707/150‑1 (MQ=255)
                                                                                                                   ctcctTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGc                           <  1:1079331/150‑1 (MQ=255)
                                                                                                                     cctTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCa                         <  1:1832708/150‑1 (MQ=255)
                                                                                                                     cctTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGGTGCCa                         >  2:292053/1‑150 (MQ=255)
                                                                                                                      ctTGAAGAACGGGC‑GCAGGCCGTTCttcaaggaggtgtaccactgcatggccgcgctcggcctgccacgtgacacct                                                                                                 <  1:262717‑M2/77‑53 (MQ=255)
                                                                                                                      ctTGAAGAACGGGC‑GCAGGCCGTTCttcaaggaggtgtaccactgcatggccgcgctcggcctgccacgtgacacct                                                                                                 >  2:262717‑M2/1‑25 (MQ=255)
                                                                                                                       ttGAAGAACGGGC‑GCAGGCCGTTGttcaaggaggtgtaccactgcatggccgcgctcggc                                                                                                                 <  2:1777724‑M2/60‑37 (MQ=255)
                                                                                                                         gaagaaCGGGC‑GCAGGCCGTTGttcaaggaggtgtaccactgcatggccgcgctcggcctgccacgtgacaccttcatgcacgaaatgggtgtcagccagttcgagatcaacctgctgcacggcgacccgctgctgttggccgaccagac                     <  1:679414‑M2/150‑129 (MQ=255)
                                                                                                                         gaagaaCGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTAc                     <  1:23299/150‑1 (MQ=255)
                                                                                                                         gaagaaCGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCGACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCACAGACGAAGAACTGCAGCTCGGTTGCCACTAc                     >  1:841366/1‑150 (MQ=255)
                                                                                                                           agaaCGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCg                   >  2:1237814/1‑150 (MQ=255)
                                                                                                                           agaaCGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCg                   >  1:907409/1‑150 (MQ=255)
                                                                                                                             aaCGGGC‑GCAGGCCGTCGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGcc                          <  1:259942/141‑1 (MQ=255)
                                                                                                                             aaCGGGC‑GCAGGCCGTCGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGcc                          >  2:259942/1‑141 (MQ=255)
                                                                                                                              aCGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCGgcg                >  1:1512336/1‑150 (MQ=255)
                                                                                                                                  gc‑gcAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCa                         <  2:1786962/137‑1 (MQ=255)
                                                                                                                                  gc‑gcAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCa                         >  1:1786962/1‑137 (MQ=255)
                                                                                                                                  gc‑gcAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCGGCGCCAg            <  1:1942278/150‑1 (MQ=255)
                                                                                                                                  gc‑gcAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCGGCGCCAg            >  2:803204/1‑150 (MQ=255)
                                                                                                                                   c‑gcAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCGgcg                <  1:220874/145‑1 (MQ=255)
                                                                                                                                   c‑gcAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCGgcg                >  2:220874/1‑145 (MQ=255)
                                                                                                                                      cAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCGGCGCCAGGcc         <  2:304486/150‑1 (MQ=255)
                                                                                                                                      cAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGG‑ACGGTTGCTGCGGGTCGGGGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCGGCGCCAGGccc        >  1:1550238/1‑150 (MQ=255)
                                                                                                                                       aGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTgggg                                                        <  1:775286/102‑1 (MQ=255)
                                                                                                                                       aGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTgggg                                                        >  2:775286/1‑102 (MQ=255)
                                                                                                                                         gCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCGGCGCCAGGCCCAg      >  2:1102646/1‑150 (MQ=255)
                                                                                                                                         gCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCGGCGCCAGGCCCAg      >  2:820309/1‑150 (MQ=255)
                                                                                                                                         gCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCGGAGGGTCGGAGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCGGCGCCAGTCCCAg      >  1:1677256/1‑150 (MQ=255)
                                                                                                                                          ccGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACgaa                                             >  2:111250/1‑110 (MQ=255)
                                                                                                                                          ccGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACgaa                                             <  1:111250/110‑1 (MQ=255)
                                                                                                                                            gttgttGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGCACTCCAGCTCGGTTGCCACTACCGGCGCCAGGCCCAGTGc   <  1:1845077/150‑1 (MQ=255)
                                                                                                                                             ttgttgGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCGGCGCCAGGCCCAGTGcc  <  2:1131926/150‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                   
GTCGGCCAACAGCAGCGGGTCGCCGTGCAGCAGGTTGATCTCGAACTGGCTGACACCCATTTCGTGCATGAAGGTGTCACGTGGCAGGCCGAGCGCGGCCATGCAGT‑GGTACACCTCCTTGAAGAACGGGC‑GCAGGCCGTTGTTGGAACTGACACTGAACGCCGAATGGCCCAGCTCGCGGCGGCCATCGCTGCCTACAGGCGGCAGGAACGGTTGCTGCGGGTCGGTGTTGGGGGCAAAGACGAAGAACTCCAGCTCGGTTGCCACTACCGGCGCCAGGCCCAGTGCC  >  NC_002947/4990622‑4990910

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.