New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6002391 =120 (1.640)6 (0.090) 6/228 NT 5.8% intergenic (‑35/+111) amaA/amaB L‑pipecolate oxidase/L‑piperidine‑6‑carboxylate dehydrogenase
?NC_002947 6002465 = 85 (1.270)intergenic (‑109/+37) amaA/amaB L‑pipecolate oxidase/L‑piperidine‑6‑carboxylate dehydrogenase

Only 100 of 116 total aligned reads displayed.

AAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGCCTTTCCAGGCATCCGAGCCCGACTCACGGCCACCGC  >  NC_002947/6002319‑6002614
                                                                                                                                                  |                                                                                                                                                      
aaGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCgg                                                                                                                                                     <  2:606587/150‑1 (MQ=255)
 aGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCggg                                                                                                                                                    <  1:1733290/150‑1 (MQ=255)
  gCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCgggg                                                                                                                                                   <  2:1372144/150‑1 (MQ=255)
    aTTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCCAGCCCCAGCCCGCTACTACACTTCCCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGc                                                                                                                                                 <  1:1692653/150‑1 (MQ=255)
      tgttgACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCGGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCa                                                                                                                                               <  2:675021/150‑1 (MQ=255)
      tgttgACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCa                                                                                                                                               <  1:902614/150‑1 (MQ=255)
       gttgACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAg                                                                                                                                              >  1:1388618/1‑150 (MQ=255)
          gACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGcc                                                                                                                                           <  1:307237/150‑1 (MQ=255)
             gCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGGACCGGGGGCCAGGccccc                                                                                                                                        >  1:619202/1‑150 (MQ=255)
             gCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGccccc                                                                                                                                        >  1:727828/1‑150 (MQ=255)
               aGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCgg                                                                                                                                      <  1:1174716/150‑1 (MQ=255)
                    ggACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATg                                                                                                                                 <  2:1005203/150‑1 (MQ=255)
                    ggACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATg                                                                                                                                 >  2:1370886/1‑150 (MQ=255)
                    ggACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATg                                                                                                                                 <  1:1342349/150‑1 (MQ=255)
                          ggCCGGCTCCATCAATTTGTTCTTTTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAACCCCGCTCCTACAGGGGTCGCTGTCGCTTGGCCGGACCCTGTAGGCGCGGGTCTACCCGGGAACCGGGGGCCAGGCCCCCGGCCATGCAGCAt                                                                                                                           <  2:1307260/150‑1 (MQ=255)
                          ggCCGGCTCCAGCAATTTGTTGTTGTTGGGGCCGGAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCAt                                                                                                                           <  2:948980/150‑1 (MQ=255)
                          ggCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGGGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCAt                                                                                                                           <  2:834781/150‑1 (MQ=255)
                          ggCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCAt                                                                                                                           <  2:1388618/150‑1 (MQ=255)
                          ggCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCAGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCAt                                                                                                                           <  1:1290192/150‑1 (MQ=255)
                            ccGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCTGGCCCCCggttc                                                                                                                                   >  1:850552/1‑137 (MQ=255)
                            ccGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCTGGCCCCCggttc                                                                                                                                   <  2:850552/140‑4 (MQ=255)
                             cGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCGGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCaa                                                                                                                        <  2:1243120/150‑1 (MQ=255)
                                 tCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACa                                                                                                                    >  1:1618991/1‑150 (MQ=255)
                                   cAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATc                                                                                                                  >  1:1890891/1‑150 (MQ=255)
                                    aGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAgg                                                                                                                                             <  2:91906/122‑1 (MQ=255)
                                    aGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAgg                                                                                                                                             >  1:91906/1‑122 (MQ=255)
                                       aaTTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGCGGCATGCCCCCGGCCATGCAGCATCAATACATCAGTc                                                                                                              >  2:1423551/1‑150 (MQ=255)
                                          ttGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGaa                                                                                                           >  2:124425/1‑150 (MQ=255)
                                            gTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAaca                                                                                                         >  1:472531/1‑150 (MQ=255)
                                             ttCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAacac                                                                                                        <  2:727828/150‑1 (MQ=255)
                                              tCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACAGCAGTCGAACACg                                                                                                       >  1:399971/1‑150 (MQ=255)
                                               cTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGa                                                                                                      <  1:322421/150‑1 (MQ=255)
                                                ttgttgGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGAt                                                                                                     >  2:1754239/1‑150 (MQ=255)
                                                  gttgGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATAc                                                                                                   >  2:250879/1‑150 (MQ=255)
                                                   ttgGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATAcc                                                                                                  <  1:1370886/150‑1 (MQ=255)
                                                     ggggCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGCACACGATACCCt                                                                                                <  2:1090860/150‑1 (MQ=255)
                                                     ggggCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCt                                                                                                >  2:1799884/1‑150 (MQ=255)
                                                     ggggCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGCAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGTCCCCCGGCCATGCAGCATCAATACATCAGTCGAACCCGATAcccc                                                                                                >  1:1669034/1‑149 (MQ=255)
                                                      gggCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCtt                                                                                               >  2:365736/1‑149 (MQ=255)
                                                       ggCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTgc                                                                                              <  1:1754239/150‑1 (MQ=255)
                                                            cAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAg                                                                                         >  2:1257963/1‑150 (MQ=255)
                                                            cAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAg                                                                                         <  1:602362/150‑1 (MQ=255)
                                                             aGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATgcagca                                                                                                                            >  1:1153504/1‑114 (MQ=255)
                                                             aGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATgcagca                                                                                                                            <  2:1153504/114‑1 (MQ=255)
                                                                 cggcCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCa                                                                                    <  2:1890891/150‑1 (MQ=255)
                                                                    cccTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCGAGctgccgct                                                                                 >  2:573718/1‑143 (MQ=255)
                                                                      cTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAAt                                                                                                                       <  2:379468/110‑1 (MQ=255)
                                                                      cTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAAt                                                                                                                       >  1:379468/1‑110 (MQ=255)
                                                                       tttCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTAGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTcgc                                                                              >  1:1855883/1‑150 (MQ=255)
                                                                           GCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCGAGCTGCCGctggcgcag                                                                          >  1:573718‑M1/1‑148 (MQ=255)
                                                                            CGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGag                                                                         >  1:250879‑M1/1‑150 (MQ=255)
                                                                              ggtagacccgctcctacagggttcgtccaagcgacaccgacccctgtaggagcgggtttacccgcgaaCCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGagt                                                                        >  1:189073‑M2/69‑149 (MQ=255)
                                                                              ggtagacccgctcctacagggttcgtccaagcgacaccgacccctgtaggagcgggtttacccgcgaaCCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGagt                                                                        <  2:189073‑M2/81‑1 (MQ=255)
                                                                              GGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGagta                                                                       >  1:413816‑M1/1‑150 (MQ=255)
                                                                                 AAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCaa                                                                                                                        >  2:1902484‑M1/1‑98 (MQ=255)
                                                                                 AAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCaa                                                                                                                        <  1:1902484‑M1/98‑1 (MQ=255)
                                                                                    cccGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCAc                                                                 <  2:1620503/150‑1 (MQ=255)
                                                                                        cTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGGACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGgtg                                                             >  1:1180772/1‑150 (MQ=255)
                                                                                        cTCCTACAGGGGTCAGTGTCGCTTGGACGAACCCTGCAGCAGAGCGCCGACCCGAGAACCGGGGGCCACGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGgtg                                                             <  1:1182244/150‑1 (MQ=255)
                                                                                           ctacagggttcgtccaagcgacaccgacccctgtaggagcgggtctacccgcgaaCCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTgc                                                                                              <  2:1710927‑M2/59‑1 (MQ=255)
                                                                                           ctacagggttcgtccaagcgacaccgacccctgtaggagcgggtctacccgcgaaCCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTgc                                                                                              >  1:1710927‑M2/56‑114 (MQ=255)
                                                                                           cTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTg                                                          <  2:399971/150‑1 (MQ=255)
                                                                                            tacagggttcgtccaagcgacaccgacccctgtaggagcgggtttacccgcgaaCCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCgg                                                                                      >  2:1764704‑M2/55‑121 (MQ=255)
                                                                                            tacagggttcgtccaagcgacaccgacccctgtaggagcgggtttacccgcgaaCCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCgg                                                                                      <  1:1764704‑M2/67‑1 (MQ=255)
                                                                                            tACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGCACACTCTTTCCATCGAGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTgg                                                         <  2:50497/150‑1 (MQ=255)
                                                                                               aGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGccccc                                                                                                                                        >  2:366929/1‑68 (MQ=255)
                                                                                               aGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGccccc                                                                                                                                        <  1:366929/68‑1 (MQ=255)
                                                                                                  ggTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGc                                                  <  1:554594/150‑1 (MQ=255)
                                                                                                    tCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCCGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGa                                                >  2:64642/1‑150 (MQ=255)
                                                                                                     cGGTGTCGCTGGGACGAACCCTGCAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGAc                                               <  1:1768955/150‑1 (MQ=255)
                                                                                                        tgtCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCa                                            <  1:83178/150‑1 (MQ=255)
                                                                                                        tgtCGCTTGGACGAACCCCGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGc                                                  <  1:1815664/144‑1 (MQ=255)
                                                                                                        tgtCGCTTGGACGAACCCCGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGc                                                  >  2:1815664/1‑144 (MQ=255)
                                                                                                         gtCGCTTGGACGAACCCTTTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCAt                                           <  2:1851614/150‑1 (MQ=255)
                                                                                                         gtCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCAt                                           <  2:970039/150‑1 (MQ=255)
                                                                                                          tCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATg                                          <  2:1618991/150‑1 (MQ=255)
                                                                                                              ttGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCgg                                                                                                                                      <  1:582526/55‑1 (MQ=255)
                                                                                                              ttGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGc                                      <  1:1257963/150‑1 (MQ=255)
                                                                                                              ttGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGc                                      >  1:178302/1‑150 (MQ=255)
                                                                                                                     atctcTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGATCACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGCAGCTCATGGTGTTGGT‑CTGGCGACGCATGTAGCCTTTCCa                               <  1:155699/146‑1 (MQ=255)
                                                                                                                      aCCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGCCTTTCCAg                              <  2:311843/150‑1 (MQ=255)
                                                                                                                          tGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGCGTAG‑TCAAATCATTAGTACTGGCGACGCATGTAGCCTTTCCAgagat                          >  2:155699/1‑146 (MQ=255)
                                                                                                                                 gCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGCCtt                                   <  2:1642442/134‑1 (MQ=255)
                                                                                                                                 gCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGCCtt                                   >  1:1642442/1‑134 (MQ=255)
                                                                                                                                    ggTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTg                                                          >  1:1195532/1‑109 (MQ=255)
                                                                                                                                    ggTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTg                                                          <  2:1195532/109‑1 (MQ=255)
                                                                                                                                     gTCTACCCGCGAACCGGGGGCCAGGCCCCCTGCCATTCAGCATCAATACATCAGTCGACCACGATACCCTGCGCCAGCGGCAGCCCCCGCGAGGAGTTCACGGTGTTGGT‑CTGGAGACGCATGTAGCCGTTCCAGGCATCCGAGCCCGAc               >  2:740921/1‑150 (MQ=255)
                                                                                                                                      tCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGCCTTTCCAGGCATCCGAGCCCGACt              >  2:1613951/1‑150 (MQ=255)
                                                                                                                                          cccgcgaaCCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGCCTTTCCAGGCATCCGAGCCCGACTCACg          >  2:1452794‑M2/9‑150 (MQ=255)
                                                                                                                                           ccgcgaaCCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGCCTTTCCAGGCATCCGAGCCCGACTCACgg         >  2:819696‑M2/8‑150 (MQ=255)
                                                                                                                                           ccgcgaaCCGGGGGCCAGGCCCCCGGCCATGCAGCAACAAGACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGCCTTTCCAGGCATCCGAGCCCGACTCACgg         >  1:1214578‑M2/8‑150 (MQ=255)
                                                                                                                                            gcatggccGGGGGCCTGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGCCTTTCCAGGCATCCGAGCCCGACTCACGGc        >  1:631332/7‑150 (MQ=255)
                                                                                                                                            cgcgaaCCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTcgc                                                                              <  1:892670‑M2/75‑1 (MQ=255)
                                                                                                                                            cgcgaaCCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTcgc                                                                              >  2:892670‑M2/7‑81 (MQ=255)
                                                                                                                                             gcgaaCCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGCCTTTCCAGGCATCCGAGCCCGACTCACg          <  2:1640830‑M2/142‑1 (MQ=255)
                                                                                                                                             gcgaaCCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGCCTTTCCAGGCATCCGAGCCCGACTCACg          >  1:1640830‑M2/6‑147 (MQ=255)
                                                                                                                                                 gccGGGGGCCTGGCCCCCGGTCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGCCTTTCCAGGCATc                         >  2:1708556/2‑128 (MQ=255)
                                                                                                                                                  ccGGGGGCCTGGCCCCCGGACATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCACGATTAGTTCACGGTTTTGGT‑CTGGCGACGCATGTAGCCTTTCCAGGCATCCGAGCCCGACTCACGGCCAccgc  >  2:314510/1‑150 (MQ=255)
                                                                                                                                                  ccGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGCCTTTCCAGGCATCCGAGCCCGACTCACGGCCAccgc  >  1:1403085/1‑150 (MQ=255)
                                                                                                                                                  ccGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGCCTTTCCAGGCATCCGAGCCCGACTCACGGCCAccgc  >  1:1239186/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                      
AAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGT‑CTGGCGACGCATGTAGCCTTTCCAGGCATCCGAGCCCGACTCACGGCCACCGC  >  NC_002947/6002319‑6002614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.