New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2004645 =	50 (0.680)	10 (0.150)	8/230	NT	17.6%	intergenic (+92/+58)	PP_1787/PP_1788	hypothetical protein/hypothetical protein
	?	NC_002947	2004687 =	47 (0.690)					intergenic (+134/+16)	PP_1787/PP_1788	hypothetical protein/hypothetical protein

CGGTCGAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTGATAGATAAAGTACTT  >  NC_002947/2004497‑2004791                                                                                                                                                     |                                                                                                                                                    cgGTCGAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCt                                                                                                                                                    <  1:561930/150‑1 (MQ=255)     aaatagttggcgacatttacaaccttatcggactcgcacaagtactttatctatcaatgtccttaatcaaaaaagatggcaccattaaaaccaatccgtattgcaagcttagatcaacactatcataaatacacatcacaaagcCTGAgg                                                                                                                                                <  1:861466‑M1/6‑1 (MQ=255)     aaatagttggcgacatttacaaccttatcggactcgcacaagtactttatctatcaatgtccttaagcaaaaaagatggcaccattaaaaccaagccgtattgcaagcttagatcaacactatcataaatacacatcacaaagcCTGAgg                                                                                                                                                >  1:814580‑M1/145‑150 (MQ=255)        tagttggcgacatttacaaccttatcggactcgcacaagtactttatctatcaatgtccttaatcaaaaaagatggcaccattaaaaccaatccgtattgcaagcttagatcaacactatcataaatacacatcacaaagcCTGAGGCGa                                                                                                                                             >  2:590525‑M1/142‑150 (MQ=255)                aGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGtttt                                                                                                                                     >  2:1596442/1‑150 (MQ=255)                  tGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGtttttt                                                                                                                                   <  2:913973/150‑1 (MQ=255)                  tGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGtttttt                                                                                                                                   <  2:913764/150‑1 (MQ=255)                     gTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGa                                                                                                                                <  2:1157965/150‑1 (MQ=255)                         tttGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGAtgtg                                                                                                                            <  2:1261932/150‑1 (MQ=255)                            gACGTGAATGAAATGGCGCTTAATGTTTAATAAGATGTAGGGAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATATCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGaaa                                                                                                                         <  1:407887/150‑1 (MQ=255)                                        gcacaagtactttatctatcaatgtccttaatcaaaaaagatggcaccattaaaaccaatccgtattgcaagcttagatcaacactatcataaatacacatcacaaagcCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑Ca                                                                                                            <  2:1161060‑M1/41‑1 (MQ=255)                                         tGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACcgcccgcccaaa                                                                                                            <  1:767323/150‑5 (MQ=255)                                              cttaatgcttaatAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCttt                                                                                                      <  1:185235/150‑1 (MQ=255)                                                     cttaatAAGATCTTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGAtgt                                                                                               >  2:477751/1‑150 (MQ=255)                                                     atctatcaatgtccttaatcaaaaaagatggcaccattaaaaccaatccgtattgcaagcttagatcaacactatcataaatacacatcacaaagcCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGAtgt                                                                                               >  1:1161060‑M1/97‑150 (MQ=255)                                                            aGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGAtgt                                                                                               >  1:760223/1‑143 (MQ=255)                                                            aGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGAtgt                                                                                               <  2:760223/143‑1 (MQ=255)                                                                atTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGc                                                                                                                                                     >  1:876722/1‑86 (MQ=255)                                                                atTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGc                                                                                                                                                     <  2:876722/86‑1 (MQ=255)                                                                     taGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTAt                                                                                       <  2:1526614/142‑1 (MQ=255)                                                                     taGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTAt                                                                                       >  1:1526614/1‑142 (MQ=255)                                                                     taGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAgtgt                                                                               >  1:425395/1‑150 (MQ=255)                                                                       gTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTg                                                                             >  2:861466/1‑150 (MQ=255)                                                                        tCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTACATGGGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGCTGGTGTTgt                                                                            >  1:1104789/1‑149 (MQ=255)                                                                         gtcccTCCACTTGACACGCCCCGAAAATGAAATCGCTTATTGCAGATTTGCAATAAGTTATTTATAAATTTGTTAGCTTAGGCGATCGGTTTTTTCGACCGAAAACTGCTCTCCT‑CAGGCTTTGTTATTTGTATTTTTGATAGTGTTGAt                                                                           <  2:271771/147‑1 (MQ=255)                                                                             cTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAgtg                                                                                >  1:594759/1‑141 (MQ=255)                                                                             cTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAgtg                                                                                <  2:594759/141‑1 (MQ=255)                                                                                  cTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGAtgtg                                                                                                                            <  2:450218/93‑1 (MQ=255)                                                                                  cTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGAtgtg                                                                                                                            >  1:450218/1‑93 (MQ=255)                                                                                  cTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTg                                                                  >  1:669728/1‑150 (MQ=255)                                                                                     gACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCaa                                                               >  1:786367/1‑150 (MQ=255)                                                                                     accattaaaaccaatccgtattgcaagcttagatcaacactatcataaatacacatcacaaagcCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTc                                                                                                                   >  1:566073‑M1/65‑99 (MQ=255)                                                                                     accattaaaaccaatccgtattgcaagcttagatcaacactatcataaatacacatcacaaagcCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTc                                                                                                                   <  2:566073‑M1/35‑1 (MQ=255)                                                                                        aTGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATAc                                                            >  1:42903/1‑150 (MQ=255)                                                                                          gCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACgg                                                          >  2:968328/1‑150 (MQ=255)                                                                                           ccccGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGaaa                                                                                                                         >  1:499765/1‑87 (MQ=255)                                                                                           ccccGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGaaa                                                                                                                         <  2:499765/87‑1 (MQ=255)                                                                                           ccccGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGa                                                         >  2:300670/1‑150 (MQ=255)                                                                                            cccGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGAt                                                        <  1:300670/150‑1 (MQ=255)                                                                                             ccGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑Ca                                                                                                            <  1:427817/97‑1 (MQ=255)                                                                                             ccGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑Ca                                                                                                            >  2:427817/1‑97 (MQ=255)                                                                                                                ttGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCt                                    >  2:1471330/1‑150 (MQ=255)                                                                                                                 ttagatcaacactatcataaatacacatcacaaagcCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCtt                                   <  1:1530311‑M1/114‑1 (MQ=255)                                                                                                                   cAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCtttt                                 >  1:1872924/1‑150 (MQ=255)                                                                                                                    aGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCttttt                                <  1:477751/150‑1 (MQ=255)                                                                                                                        ttGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGAt                            <  2:42903/150‑1 (MQ=255)                                                                                                                         tGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGAtt                           <  2:1104789/150‑1 (MQ=255)                                                                                                                         tGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGAtt                           <  1:968328/150‑1 (MQ=255)                                                                                                                           cAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTaa                         >  1:689171/1‑150 (MQ=255)                                                                                                                            aaTAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAg                        <  1:1156231/150‑1 (MQ=255)                                                                                                                                aGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGt                                           <  1:69492/127‑1 (MQ=255)                                                                                                                                aGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGt                                           >  2:69492/1‑127 (MQ=255)                                                                                                                                     tttCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTgat               <  2:786367/150‑1 (MQ=255)                                                                                                                                     tctCTACATTTGTTTGCTTAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTATAACGGGTGCGATG‑GAAGGTAGTATCGTGTTGATCGAAGATTGAACTACGGCTTGGTTTCCGCGTTGCCATCTTTTTTGATTAAGGACATTgat               <  1:1407905/148‑1 (MQ=255)                                                                                                                                      ttCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGGAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTgata              <  2:1323799/150‑1 (MQ=255)                                                                                                                                       tCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTgatag             <  2:1851252/150‑1 (MQ=255)                                                                                                                                        cacatcacaaagcCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTACGGTCATTgataga            >  2:1530311‑M1/14‑150 (MQ=255)                                                                                                                                         tAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCACTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTgataaga           >  2:1407905/1‑147 (MQ=255)                                                                                                                                         acatcacaaagcCTGAGGCGATCGGTTTTTTGGAt                                                                                                                               <  1:1135600‑M1/23‑1 (MQ=255)                                                                                                                                         acatcacaaagcCTGAGGCGATCGGTTTTTTGGAt                                                                                                                               <  1:1135715‑M1/23‑1 (MQ=255)                                                                                                                                         acatcacaaagcCTGAGGCGATCGGTTTTTTGGAt                                                                                                                               >  2:1135600‑M1/13‑35 (MQ=255)                                                                                                                                         acatcacaaagcCTGAGGCGATCGGTTTTTTGGAt                                                                                                                               >  2:1135715‑M1/13‑35 (MQ=255)                                                                                                                                          aaaTTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTgatagata          <  2:689171/150‑1 (MQ=255)                                                                                                                                            aTTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTGATAGATaaa        <  1:1596442/150‑1 (MQ=255)                                                                                                                                             tttGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTgatagat           >  1:1248972/1‑146 (MQ=255)                                                                                                                                             tttGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTgatagat           <  2:1248972/146‑1 (MQ=255)                                                                                                                                                  tAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTCAGGACATTGATAGATAAAGTACtt  <  2:595599/150‑1 (MQ=255)                                                                                                                                                     CTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTtac                                               >  2:1332433‑M1/1‑101 (MQ=255)                                                                                                                                                     CTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTaa                                               <  1:1332433‑M1/102‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CGGTCGAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTGATAGATAAAGTACTT  >  NC_002947/2004497‑2004791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.