New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2004645 =	50 (0.680)	10 (0.150)	8/230	NT	17.6%	intergenic (+92/+58)	PP_1787/PP_1788	hypothetical protein/hypothetical protein
	?	NC_002947	2004687 =	47 (0.690)					intergenic (+134/+16)	PP_1787/PP_1788	hypothetical protein/hypothetical protein

CTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTGATAGATAAAGTACTTGTGCGAGTCCGATAAGGTTGTAAATGTCGCCAACTATTTCTTCGT  >  NC_002947/2004542‑2004836                                                                                                                                                   |                                                                                                                                                      cttaatgcttaatAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCttt                                                                                                                                                   <  1:185235/150‑1 (MQ=255)        cttaatAAGATCTTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGAtgt                                                                                                                                            >  2:477751/1‑150 (MQ=255)        atctatcaatgtccttaatcaaaaaagatggcaccattaaaaccaatccgtattgcaagcttagatcaacactatcataaatacacatcacaaagcCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGAtgt                                                                                                                                            >  1:1161060‑M1/97‑150 (MQ=255)          tctatcaatgaccgtaatcaaaaaagatggcaccattaaaaccaatccgtattgcaagcttagatcaacactatcataaatacacatcacaaagcctgaggcgagcggtttcacatccaaaaaaccgatcgcctcagGCTTTGTGAtgtg                                                                                                                                           >  2:1530311‑M2/138‑150 (MQ=255)               aGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGAtgt                                                                                                                                            >  1:760223/1‑143 (MQ=255)               aGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGAtgt                                                                                                                                            <  2:760223/143‑1 (MQ=255)                        taGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTAt                                                                                                                                    >  1:1526614/1‑142 (MQ=255)                        taGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTAt                                                                                                                                    <  2:1526614/142‑1 (MQ=255)                        taGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAgtgt                                                                                                                            >  1:425395/1‑150 (MQ=255)                          gTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTg                                                                                                                          >  2:861466/1‑150 (MQ=255)                           tCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTACATGGGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGCTGGTGTTgt                                                                                                                         >  1:1104789/1‑149 (MQ=255)                            gtcccTCCACTTGACACGCCCCGAAAATGAAATCGCTTATTGCAGATTTGCAATAAGTTATTTATAAATTTGTTAGCTTAGGCGATCGGTTTTTTCGACCGAAAACTGCTCTCCT‑CAGGCTTTGTTATTTGTATTTTTGATAGTGTTGAt                                                                                                                        <  2:271771/147‑1 (MQ=255)                                cTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAgtg                                                                                                                             <  2:594759/141‑1 (MQ=255)                                cTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAgtg                                                                                                                             >  1:594759/1‑141 (MQ=255)                                 aagatggcaccattaaaaccaatccgtattgcaagcttagatcaacactatcataaatacacatcacaaagcctgaggcgagcggtttcacatccaaaaaaccgatcgcctcagGCTTTGTGATGTGTATTTATGATAGTGTTGATCTaa                                                                                                                    <  1:1530311‑M2/36‑1 (MQ=255)                                     cTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTg                                                                                                               >  1:669728/1‑150 (MQ=255)                                        gACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCaa                                                                                                            >  1:786367/1‑150 (MQ=255)                                           aTGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATAc                                                                                                         >  1:42903/1‑150 (MQ=255)                                             gCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACgg                                                                                                       >  2:968328/1‑150 (MQ=255)                                              ccccGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGa                                                                                                      >  2:300670/1‑150 (MQ=255)                                               cccGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGAt                                                                                                     <  1:300670/150‑1 (MQ=255)                                                                   ttGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCt                                                                                 >  2:1471330/1‑150 (MQ=255)                                                                    ttagatcaacactatcataaatacacatcacaaagcCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCtt                                                                                <  1:1530311‑M1/114‑1 (MQ=255)                                                                      cAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCtttt                                                                              >  1:1872924/1‑150 (MQ=255)                                                                       aGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCttttt                                                                             <  1:477751/150‑1 (MQ=255)                                                                           ttGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGAt                                                                         <  2:42903/150‑1 (MQ=255)                                                                            tGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGAtt                                                                        <  2:1104789/150‑1 (MQ=255)                                                                            tGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGAtt                                                                        <  1:968328/150‑1 (MQ=255)                                                                              cAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTaa                                                                      >  1:689171/1‑150 (MQ=255)                                                                               aaTAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAg                                                                     <  1:1156231/150‑1 (MQ=255)                                                                                   aGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGt                                                                                        <  1:69492/127‑1 (MQ=255)                                                                                   aGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGt                                                                                        >  2:69492/1‑127 (MQ=255)                                                                                        tttCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTgat                                                            <  2:786367/150‑1 (MQ=255)                                                                                        tctCTACATTTGTTTGCTTAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTATAACGGGTGCGATG‑GAAGGTAGTATCGTGTTGATCGAAGATTGAACTACGGCTTGGTTTCCGCGTTGCCATCTTTTTTGATTAAGGACATTgat                                                            <  1:1407905/148‑1 (MQ=255)                                                                                         ttCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGGAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTgata                                                           <  2:1323799/150‑1 (MQ=255)                                                                                          tCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTgatag                                                          <  2:1851252/150‑1 (MQ=255)                                                                                           cacatcacaaagcCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTACGGTCATTgataga                                                         >  2:1530311‑M1/14‑150 (MQ=255)                                                                                            tAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCACTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTgataaga                                                        >  2:1407905/1‑147 (MQ=255)                                                                                             acatcacaaagcctgaggcgagcggtttcacatccaaaaaaccgatcgcctcagGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTgatagat                                                        >  1:1161060‑M2/55‑150 (MQ=255)                                                                                             aaaTTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTgatagata                                                       <  2:689171/150‑1 (MQ=255)                                                                                               aTTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTGATAGATaaa                                                     <  1:1596442/150‑1 (MQ=255)                                                                                                tttGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTgatagat                                                        <  2:1248972/146‑1 (MQ=255)                                                                                                tttGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTgatagat                                                        >  1:1248972/1‑146 (MQ=255)                                                                                                     tAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTCAGGACATTGATAGATAAAGTACtt                                               <  2:595599/150‑1 (MQ=255)                                                                                                        CTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTtac                                                                                            >  2:1332433‑M1/1‑101 (MQ=255)                                                                                                        CTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTaa                                                                                            <  1:1332433‑M1/102‑1 (MQ=255)                                                                                                         TGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCtttttt                                                                            <  2:654551‑M1/117‑1 (MQ=255)                                                                                                         TGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCtttttt                                                                            >  1:654551‑M1/1‑117 (MQ=255)                                                                                                          tgaggcgagcggtttcacatccaaaaaaccgatcgcctcagGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTGATAGATAAAGTACTTGTGc                                           <  2:1161060‑M2/109‑1 (MQ=255)                                                                                                                gagcggtttcacatccaaaaaaccgatcgcctcagGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGt                                                                                        <  2:566073‑M2/64‑1 (MQ=255)                                                                                                                gagcggtttcacatccaaaaaaccgatcgcctcagGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGt                                                                                        >  1:566073‑M2/36‑99 (MQ=255)                                                                                                                           ggATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTGATAGATAAAGTACTTGTGCGAGTCCGATAAGGTTGTa                         >  1:179854/1‑150 (MQ=255)                                                                                                                            atccaaaaaaccgatcgcctcagGCTTTGTGAtgt                                                                                                                                            <  1:1135715‑M2/12‑1 (MQ=255)                                                                                                                            atccaaaaaaccgatcgcctcagGCTTTGTGAtgt                                                                                                                                            >  2:1135600‑M2/24‑35 (MQ=255)                                                                                                                            atccaaaaaaccgatcgcctcagGCTTTGTGAtgt                                                                                                                                            >  2:1135715‑M2/24‑35 (MQ=255)                                                                                                                            atccaaaaaaccgatcgcctcagGCTTTGTGAtgt                                                                                                                                            <  1:1135600‑M2/12‑1 (MQ=255)                                                                                                                              tgtgAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTTCTCTAAGCGTTCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTGATAGATAAAGTACTTGTGCGAGTCCGATAAGGTTGTAAAt                      <  2:425395/150‑1 (MQ=255)                                                                                                                                tgAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTGATAGATAAAGTACTTGTGCGAGTCCGATAAGGTTGt                          >  2:269370/1‑144 (MQ=255)                                                                                                                                tgAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTGATAGATAAAGTACTTGTGCGAGTCCGATAAGGTTGt                          <  1:269370/144‑1 (MQ=255)                                                                                                                                 gAAACCGCTCGCCT‑CCGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGAAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTGATAGATAAAg                                                    <  2:1299226/117‑1 (MQ=255)                                                                                                                                 gAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGAAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTGATAGATAAAg                                                    >  1:1299226/1‑117 (MQ=255)                                                                                                                                  aaaCCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTg                                                                                                               >  2:43488/1‑57 (MQ=255)                                                                                                                                  aaaCCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTg                                                                                                               <  1:43488/57‑1 (MQ=255)                                                                                                                                  aaaCCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCtttt                                                                              >  2:438464/1‑90 (MQ=255)                                                                                                                                  aaaCCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCtttt                                                                              <  1:438464/90‑1 (MQ=255)                                                                                                                                          tcgcctcagGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTGATAGATAAAGTACTTGTGCGAGTCCGATAAGGTTGTAAATGTCGCCAACTa           >  2:590525‑M2/10‑150 (MQ=255)                                                                                                                                             cctcagGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGCTTGGTTTTAATGGTGCCATCTTTTTTGCTTAAGGACATTGATAGATAAAGTACTTGTGCGAGTCCGATAAGGTTGTAAATGTCGCCAACTAttt        >  1:814580‑M2/7‑150 (MQ=255)                                                                                                                                             cctcagGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTGATAGATAAAGTACTTGTGCGAGTCCGATAAGGTTGTAAATGTCGCCAACTAttt        <  1:861466‑M2/144‑1 (MQ=255)                                                                                                                                                   gCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACAt                                                                >  1:794454/1‑88 (MQ=255)                                                                                                                                                   gCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACAt                                                                <  2:794454/88‑1 (MQ=255)                                                                                                                                                   gCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTGATAGACAAAGTACTTGTGCGAGGCCGATAAGGTTGTAAATGTCGCCAACTATTTCTTCGt  >  2:119453/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                      CTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCT‑CAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTTTGATTAAGGACATTGATAGATAAAGTACTTGTGCGAGTCCGATAAGGTTGTAAATGTCGCCAACTATTTCTTCGT  >  NC_002947/2004542‑2004836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.