| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3057317 = | 94 (1.290) | 6 (0.090) | 5/236 | NT | 6.5% | coding (74/990 nt) | PP_2669 | outer membrane protein |
| ? | NC_002947 | 3057349 = | 83 (1.200) | coding (42/990 nt) | PP_2669 | outer membrane protein | |||||
GGACAGCCTGGGCTATGACAAGCCCGAAGTGACGTGTAGCTACCCCTGACCCGACAACCACAACAATAAGGAATCCGCCATGCGCCGCCCCCTCTTCCACCGGGCCCTGCTTTACCCCAGCCTGCTGTCGGGCGCCCTGGCGCTGGCCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3057469‑3057317‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCATGGCGGATTCCTTATTGTTGTGGTTGTCGGGTCAGGGGTAGCTACACGTCACTTCGGGCTTGTCATAGCCCAGGCTGTCCATTTCGTTGAAGGGATGCAGGAAGCC > NC_002947/3057349‑3057495 GGACAGCCTGGGCTATGACAAGCCCGAAGTGACGTGTAGCTACCCCTGACCCGACAACCACAACAATAAGGAATCCGCCATGCGCCGCCCCCTCTTCCACCGGGCCCTGCTTTACCCCAGCCTGCTGTCGGGCGCCCTGGCGCTGGCCAG < 1:1529713/150‑1GGACAGCCTGGGCTATGACAAGCCCGAAGTGACGTGTAGCTACCCCTGACCCGACAACCACAACAATAAGGAATCCGCCATGCGCCGCCCCCTCTTCCACCGGGCCCTGCTTTACCCCAGCCTGCTGTCGGGCGCCCTGGCGCTGGCCAG > 1:471367/1‑150 ACAGCCTGGGCTATGACAAGCCCGAAGTGACGTGTAGCTACCCCTGACCCGACAACCACAACAATAAGGAATCCGCCATGCGCCGCCCCCTCTTCCACCGGGCCCTGCTTTACCCCAGCCTGCTGTCGGGCGCCCTGGCGCTGGCCAGCA > 2:1404832/1‑150 ACAGCCTGGGCTATGACAAGCCCGAAGTGACGTGTAGCTACCCCTGACCCGACAACCACAACAATAAGGAATCCGCCATGCGCCGCCCCCTCTTCCACCGGGCCCTGCTTTACCCCAGCCTGCTGTCGGGCGCCCTGGCGCTGGCCAGCA < 2:790636/150‑1 CCTGCTGTCGGGCGCCCTGGCGCTGGCCAGCAGGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCATGGCGGATTCCTTATTGTTGTGGTTGTCGGGTCAGGGGTAGCTACACGTCACTTCGGGCTTGTCATAGCCCAGGCT > 2:524218/1‑150 TGCTGTCGGGCGCCCTGGCGCTGGCCAGCAGGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCATGGCGGATTCCT < 1:854162/84‑1 TGCTGTCGGGCGCCCTGGCGCTGGCCAGCAGGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCATGGCGGATTCCT > 2:854162/1‑84 TGCTGTCGGGCGCCCTGGCGCTGGCCAGCAGGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGG > 1:628431/1‑64 TGCTGTCGGGCGCCCTGGCGCTGGCCAGCAGGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGG < 2:628431/64‑1 CTGGCGCTGGCCAGCAGTCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCATGGCGGATTCCTTATTGTTGTGGTTGTCGGGTCAGGGGTAGCTACACGTCACTTCGGGCTTGTCATAGCCCAGGCTGTCCATTTCGTTGAAG > 1:1632426/1‑150 acacCAGGCTGGGGTCAAGCAGGGCCCGGGGGAAGAGGGGGCGCCGCATGGCGGATTCCTTATTGTTGTGGTTGCTGGTCCAGGGGTAGCTACACGTCACTTCGGGCTTGTCATAGCCCAGGCTGTCCATTTCGTTGAAGGGATGCAGGA < 1:436209/146‑1 CAGGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCATGGCGGATTCCTTATTGTTGTGGTTGTCGGGTCAGGGGTAGCTACACGTCACTTCGGGCTTGTCATAGCCCAGGCTGTCCATTTCGTTGAAGGGATGCAGGAAGCC > 2:1316838/1‑150 CAGGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCACGGTAAATGCTGTATTGTTGTGGTTGTCGGGTCAGGGGTAGCTACACGTCACTTCGGGCTTGTCATAGCCCAGGCTGTCCATTTCGTTGAAGGGATGCAGGAAGCC < 1:435959/150‑1 GGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCATGGCGGATTCCTTATTGTTGTGGTTGTCGGGTCAGGGGTAGCTACACGTCACTTCGGGCTTGTCATAGCCCAGGCTGTCCATTTCGTTGAAGGGATGCAGGAA < 1:1109398/145‑1 GGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCATGGCGGATTCCTTATTGTTGTGGTTGTCGGGTCAGGGGTAGCTACACGTCACTTCGGGCTTGTCATAGCCCAGGCTGTCCATTTCGTTGAAGGGATGCAGGAA > 2:1109398/1‑145 GGACAGCCTGGGCTATGACAAGCCCGAAGTGACGTGTAGCTACCCCTGACCCGACAACCACAACAATAAGGAATCCGCCATGCGCCGCCCCCTCTTCCACCGGGCCCTGCTTTACCCCAGCCTGCTGTCGGGCGCCCTGGCGCTGGCCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3057469‑3057317‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCATGGCGGATTCCTTATTGTTGTGGTTGTCGGGTCAGGGGTAGCTACACGTCACTTCGGGCTTGTCATAGCCCAGGCTGTCCATTTCGTTGAAGGGATGCAGGAAGCC > NC_002947/3057349‑3057495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |