New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 357189144 (0.600)4 (0.060) 4/236 NT 8.4% intergenic (+10/‑117) yneJ/PP_3153 LysR family DNA‑binding transcriptional regulator/hypothetical protein
?NC_002947 = 3571910 45 (0.650)intergenic (+29/‑98) yneJ/PP_3153 LysR family DNA‑binding transcriptional regulator/hypothetical protein

GCACCGTCAGCGCCTGGCCAATGTCGGAGGACTTCCGCTATCTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCTCGAAAGGAGGGTCGTACCATGCGTAACCATCACTATGCGCTCGGCGCTGCC  >  NC_002947/3571751‑3572040
                                                                                                                                            |                                                                                                                                                     
gcaCCGTCAGCGCCTGGCCAATGTCGGAGGACTTCCGCTATCTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCt                                                                                                                                              >  2:1355783/1‑150 (MQ=255)
  aCCGTCAGCGCCTGGCCAATGTCGGAGGACTTCCGCTATCTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGa                                                                                                                                            <  1:776988/150‑1 (MQ=255)
         gcgcCTGGCCAATGTCGGAGGACTTCCGCTATCTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGCAGGTGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTg                                                                                                                                     >  1:18706/1‑150 (MQ=255)
           gCCTGGCCAATGTCGGAGGACTTCCGATATCAGCTTAGCGGTCGTGGAGTTCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAa                                                                                                                                   >  1:1398380‑M2/1‑149 (MQ=255)
            ccTGGCCAATGTCGGAGGACTTCCGCTATCTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAag                                                                                                                                  >  2:881261‑M2/1‑148 (MQ=255)
                   aaTGTCGGAGGACTTCCGCTATCTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATaa                                                                                                                                                 <  1:461805/128‑1 (MQ=255)
                   aaTGTCGGAGGACTTCCGCTATCTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATaa                                                                                                                                                 >  2:461805/1‑128 (MQ=255)
                                ttCCGCTATCTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAagtg                                                                                                                                <  1:1324450‑M2/132‑5 (MQ=255)
                                ttCCGCTATCTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGAcc                                                                                                              >  2:782903/1‑150 (MQ=255)
                                ttCCGCTATCTGAAAACCTGGCTCGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAagtg                                                                                                                                >  2:1324450‑M2/1‑128 (MQ=255)
                                 tCCGCTATCTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCa                                                                                                             <  1:1634519/150‑1 (MQ=255)
                                 tCCGCTATCTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTCGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCa                                                                                                             >  2:1689135/1‑150 (MQ=255)
                                  ccGCTATCTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAg                                                                                                            <  1:1355783/150‑1 (MQ=255)
                                  ccGCTATCTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGCTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAg                                                                                                            <  1:41800/150‑1 (MQ=255)
                                     cTATCTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCa                                                                                                         >  1:1026995/1‑150 (MQ=255)
                                       aTCTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATc                                                                                                       <  2:1146619/150‑1 (MQ=255)
                                         cTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTc                                                                                                                                                      >  1:410542/1‑101 (MQ=255)
                                         cTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTc                                                                                                                                                      <  2:410542/101‑1 (MQ=255)
                                            aaaaCCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCAc                                                                                                  >  1:1738108/1‑150 (MQ=255)
                                            aaaaCCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCAc                                                                                                  >  1:1924016/1‑150 (MQ=255)
                                            aaaaCCTGGCTGGTATGGCGACAAGGTACTGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTCAGCAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCAc                                                                                                  <  1:1879164/150‑1 (MQ=255)
                                                ccTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAac                                                                                              >  1:1478695/1‑150 (MQ=255)
                                                 ctggctggTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTc                                                                                                                                                      <  1:1690351/93‑1 (MQ=255)
                                                 ctggctggTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTc                                                                                                                                                      >  2:1690351/1‑93 (MQ=255)
                                                               gacgaGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGgga                                                                               <  2:1478695/150‑1 (MQ=255)
                                                                   aGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGAt                                                                           <  1:782903/150‑1 (MQ=255)
                                                                    ggTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTtcagataatcaggttatcgagtgaaaacatcagc                                                                                                                     <  1:57369‑M1/107‑35 (MQ=255)
                                                                    ggTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTtcagataatcaggttatcgagtgaaaacatcagc                                                                                                                     >  2:57369‑M1/1‑73 (MQ=255)
                                                                      tACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGACATCAGCACGAACACCCTTTCGCTGGGAGGATCAg                                                                        >  1:209286/1‑150 (MQ=255)
                                                                           tctcGCGCAGTTTGAGCATGGTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGACATCAGCACGAACACCCTTTCGCTGGGAGGATCAGataat                                                                   <  2:209286/150‑1 (MQ=255)
                                                                             tcGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAagt                                                                                                                                 <  2:1598985‑M2/86‑4 (MQ=255)
                                                                             tcGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAagt                                                                                                                                 >  1:1598985‑M2/1‑83 (MQ=255)
                                                                             tcGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAg                                                                 <  2:1738108/150‑1 (MQ=255)
                                                                                     tttGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCa                                                         >  2:829100/1‑150 (MQ=255)
                                                                                     tttGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGAGAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCa                                                         >  2:1863283/1‑150 (MQ=255)
                                                                                              gTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCTCGaaa                                                <  2:1026995/150‑1 (MQ=255)
                                                                                                  gTGAAGTTGCTTGAAGAGGGCCGCGCAAGCTGATGTTTTCACTtcagataatcaggttatcgagtgaaaacatca                                                                                                                       >  1:1418648‑M1/1‑43 (MQ=255)
                                                                                                  gTGAAGTTGCTTGAAGAGGGCCGCGCAAGCTGATGTTTTCACTtcagataatcaggttatcgagtgaaaacatca                                                                                                                       <  2:1418648‑M1/75‑33 (MQ=255)
                                                                                                  gTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCTCGAAaggag                                            >  2:1248930/1‑150 (MQ=255)
                                                                                                   tGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCTCGAAaggagg                                           <  1:1248930/150‑1 (MQ=255)
                                                                                                    gAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAg                                                                                                            >  1:1254314/1‑84 (MQ=255)
                                                                                                    gAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAg                                                                                                            <  2:1254314/84‑1 (MQ=255)
                                                                                                    gAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCTCGAAAGGAggg                                          >  1:1799171/1‑150 (MQ=255)
                                                                                                            ttGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCt                                                     >  2:195016/1‑131 (MQ=255)
                                                                                                            ttGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCt                                                     <  1:195016/131‑1 (MQ=255)
                                                                                                            ttGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCTCGAAAGGAGGGTCGTACCa                                  <  1:829100/150‑1 (MQ=255)
                                                                                                              gaagaaGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCTATCCTCGAAAGGAGGGTCGTACCATg                                >  2:93974/1‑150 (MQ=255)
                                                                                                               aagaagGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCTCGaaa                                                >  2:1638547/1‑133 (MQ=255)
                                                                                                               aagaagGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCTCGaaa                                                <  1:1638547/133‑1 (MQ=255)
                                                                                                               aagaagGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCTCGAAAGGAGGGTCGTACCATGc                               <  2:1799171/150‑1 (MQ=255)
                                                                                                                agaagaCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCTCGAAAGGAGGGTCGTACCATGCg                              >  2:739888/1‑150 (MQ=255)
                                                                                                                agaagGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCa                                                                         <  1:1054358/107‑1 (MQ=255)
                                                                                                                agaagGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCa                                                                         >  2:1054358/1‑107 (MQ=255)
                                                                                                                     gCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGTATCAGATAATAGGTAAGCCATCCTCGAAAGGAGGGTCGTACCATGCGTAAcc                         >  2:1821406/1‑150 (MQ=255)
                                                                                                                             aGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCTCGAAAGGAGGGTCGTACCATGCGTAACCATCACTAt                 <  1:1529444/150‑1 (MQ=255)
                                                                                                                              gCTGATGTTTTCACTCGATAACCTGATTATCTGAagtgaaaacatcagcttgcgcggccttcttcaagcaacttcacgaacatgctcaaactgcgcgagaccgtacc                                                           >  2:57369‑M2/1‑34 (MQ=255)
                                                                                                                              gCTGATGTTTTCACTCGATAACCTGATTATCTGAagtgaaaacatcagcttgcgcggccttcttcaagcaacttcacgaacatgctcaaactgcgcgagaccgtacc                                                           <  1:57369‑M2/107‑74 (MQ=255)
                                                                                                                                tGATGTTTTCACTCGATAACCTGATTATCTGAagtgaaaacatcagcttgcgcggccctcttcaagcaacttcac                                                                                         <  2:1418648‑M2/75‑44 (MQ=255)
                                                                                                                                tGATGTTTTCACTCGATAACCTGATTATCTGAagtgaaaacatcagcttgcgcggccctcttcaagcaacttcac                                                                                         >  1:1418648‑M2/1‑32 (MQ=255)
                                                                                                                                tGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGaa                                                                                               >  2:957536/1‑69 (MQ=255)
                                                                                                                                tGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGaa                                                                                               <  1:957536/69‑1 (MQ=255)
                                                                                                                                tGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCTCGAAAGGAGGGTCGTACCATGCGTAACCATCACTATgcg              >  2:207767/1‑150 (MQ=255)
                                                                                                                                         cACTtcagataatcaggttatcgagtgaaaacatcagcttgcgcggccttcttcaagcaacttcacgaacatgctcaaactgcgcgagaccgtacctcgtcgccatacgagccaggttttcagatagcggaa                       >  2:1324450‑M1/1‑4 (MQ=255)
                                                                                                                                         cACTtcagataatcaggttatcgagtgaaaacatcagcttgcgcggccttcttcaagcaacttcacgaacatgctcaaactgcgcgagaccgtacctcgtcgccataccagccaggttttcagatagcggaa                       <  1:1324450‑M1/132‑129 (MQ=255)
                                                                                                                                          aCTtcagataatcaggttatcgagtgaaaacatcagcttgcgcggccttcttcaagcaacttcacgaacatgctcaaactgcgcga                                                                    <  2:1598985‑M1/86‑84 (MQ=255)
                                                                                                                                          aCTtcagataatcaggttatcgagtgaaaacatcagcttgcgcggccttcttcaagcaacttcacgaacatgctcaaactgcgcga                                                                    >  1:1598985‑M1/1‑3 (MQ=255)
                                                                                                                                          aCTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCTCGAAAGGAGGGTCGTACCATGCGTAACCATCACTATGCGCTCGGCGCTg    >  1:345167/1‑150 (MQ=255)
                                                                                                                                           cTtcagataatcaggttatcgagtgaaaacatcagcttgcgcggccttcttcaagcaacttcacgaacatgctcaaactgcgcgagaccgtacctcgtcgccataccagccaggttttcagatagcggaagtcctccgacattggccagg   >  2:881261‑M1/1‑2 (MQ=255)
                                                                                                                                           cTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCTCGAAAGGAGGGTCGTACCATGCGTAACCATCa                     >  2:15143/1‑132 (MQ=255)
                                                                                                                                           cTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCTCGAAAGGAGGGTCGTACCATGCGTAACCATCa                     <  1:15143/132‑1 (MQ=255)
                                                                                                                                            ttcagataatcaggttatcgagtgaaaacatcagcttgcgcggccttcttcaagcaacttcacgaacatgctcaaactgcgcgagaccgtacctcgtcgaactccacgaccgctaagctgatatcggaagtcctccgacattggccaggc  >  1:1398380‑M1/1‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                                     
GCACCGTCAGCGCCTGGCCAATGTCGGAGGACTTCCGCTATCTGAAAACCTGGCTGGTATGGCGACGAGGTACGGTCTCGCGCAGTTTGAGCATGTTCGTGAAGTTGCTTGAAGAAGGCCGCGCAAGCTGATGTTTTCACTCGATAACCTGATTATCTGAAGTGAATTTCACCGCCATGACCAGGCATCAGCACGAACACCCTTTCGCTGGGAGGATCAGATAATAGGTAAGCCATCCTCGAAAGGAGGGTCGTACCATGCGTAACCATCACTATGCGCTCGGCGCTGCC  >  NC_002947/3571751‑3572040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.