New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3797037 = | 78 (1.070) | 6 (0.090) | 6/236 | NT | 7.4% | coding (1000/1449 nt) | vdh | vanillin dehydrogenase |
? | NC_002947 | 3797067 = | 76 (1.090) | coding (970/1449 nt) | vdh | vanillin dehydrogenase |
CTGCATGTCCACCGAGCGCCTTGTGGTGGACAGCTGTATTGCCGACGCTTTCGTCGACAAGCTGGCGGTGAAGATCGCCGGGCTGCGTGCAGGTGATCCGCAAGCCAGCACCTCGGTGCTCGGCTCGCTGGTCAGCGCAGCGGCCGGCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3797188‑3797037 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgagcCGAGCACCGAGGTGCTGGCTTGCGGATCACCTGCACGCAGCCCGGCGATCTTCACCGCCAGCTTGTCGACGAAAGCGTCGGCAATACAGCTGTCCACCACAAGGCGCTCGGTGGACATGCAGATCTGCCCCTGGTTGAAGTAGGCACCG > NC_002947/3797067‑3797215 CTGCATGTCCACCGAGCGCCTTGTGGTGGACAGCTGTATTGCCGACGCTTTCGTCGACAAGCTGGCGGTGAAGATCGCCGGGCTGCGTGCAGGTGATCCGCAAGCCAGCACCTCGGTGCTCGGCTCGCTGGTCAGCGCAGCGGCCGGCGA < 2:445124/150‑1 GACAAGCTGGCGGTGAAGATCGCCGGGCTGCGTGCAGGTGATCCGCAAGCCAGCACCTCGGTGCTCGGCTCGCTGGTCAGCGCAGCGGCCGGC > 1:55713/1‑93 GACAAGCTGGCGGTGAAGATCGCCGGGCTGCGTGCAGGTGATCCGCAAGCCAGCACCTCGGTGCTCGGCTCGCTGGTCAGCGCAGCGGCCGGC < 2:55713/93‑1 TCGGTGCTCGGCTCGCTGGTCAGCGCAGCGGCCGGCGAGCCGAGCACCGAGGTGCTGGCTTGCGGATCACCTGCACGCAGCCCGGCGATCTTCACCGCCAGCTTGTCGACGAAAGCGTCGGCAATACAGCTGTCCACCACAAGGCGCTCG > 1:1570991/1‑150 GGTGCTCGGCTCGCTGGTCAGCGCAGCGGCCGGCGAGCCGAGCACCGAGGTGCTGGCTTGCGGATCACCTGCACGCAGCCCGGCGATCTTCACCGCCAGCTTGTCGACGAAAGCGTCGGCAATACAGCTGTCCACCACAAGGCGCTCGGT < 2:1570991/150‑1 GTGCTCGGCTCGCTGGTCAGCGCAGCGGCCGGCGAGCCGAGCACCGAGGTGCTGGCTTGCGGATCACCTGCACGCAGCCCGGCGATCTTCACCGCCAGCTTGTCGACGAAAGCGTCG > 1:1058210/1‑117 GTGCTCGGCTCGCTGGTCAGCGCAGCGGCCGGCGAGCCGAGCACCGAGGTGCTGGCTTGCGGATCACCTGCACGCAGCCCGGCGATCTTCACCGCCAGCTTGTCGACGAAAGCGTCG < 2:1058210/117‑1 GCTGGTCAGCGCAGCGGCCGGCGAGCCGAGCACCGAGGTGCTGGCTTGCGGATCACCTGCACGCAGCCCGGCGATCTTCACCGCCAGCTTGTCGACGAAAGCGTCGGCAATACAGCTGTCCACCACAAGGCGCTCGGTGGACATGCAGAT < 1:92085/150‑1 GCTGGTCAGCGCAGCGGCCGGCGAGCCGAGCACCGAGGTGCTGGCTTGCGGATCACCTGCACGCAGCCCGGCGATCTTCACCGCCAGCTTGTCGACGAAAGCGTCGGCAATACAGCTGTCCACCACAAGGCGCTCGGTGGACATGCAGAT > 2:92085/1‑150 GCGAGCCGAGCACCGAGGTGCTGGCTTGCGGATCACCTGCACGCAGCCCGGCGATCTTCACCGCCAGCTTGTCGACGAAAGCGTCGGCAATACAGCTGTCCACCACAAGGCGCTCGGTGGACATGCAGATCTGCCCCTGGTTGAAGTAGG < 1:1495142/150‑1 GAGCCGAGCACCGAGGTGCTGGCTTGCGGATCACCTGCACGCAGCCCGGCGATCTTCACCGCCAGCTTGTCGACGAAAGCGTCGGCAATACAGCTGTCCACCACAAGGCGCTCGGTGGACATGCAGATCTGCCCCTGGTTGAAGTAGGCA < 2:1886327/150‑1 GCCGAGCACCGAGGTGCTGGCTTGCGGATCACCTGCACGCAGCCCGGCGATCTTCACCGCCAGCTTGTCGACGAAAGCGTCGGCAATACAGCTGTCCACCACAAGGCGCTCGGTG > 1:224893/1‑115 GCCGAGCACCGAGGTGCTGGCTTGCGGATCACCTGCACGCAGCCCGGCGATCTTCACCGCCAGCTTGTCGACGAAAGCGTCGGCAATACAGCTGTCCACCACAAGGCGCTCGGTG < 2:224893/115‑1 CCGAGCACCGAGGTGCTGGCTTGCGGATCACCTGCACGCAGCCCGGCGATCTTCACCGCCAGCTTGTCGACGAAAGCGTCGGCAATACAGCTGTCCACCACAAGGCGCTCGGTGGACATGCAGATCTGCCCCTGGTTGAAGTAGGCACCG > 2:534885/1‑150 CTGCATGTCCACCGAGCGCCTTGTGGTGGACAGCTGTATTGCCGACGCTTTCGTCGACAAGCTGGCGGTGAAGATCGCCGGGCTGCGTGCAGGTGATCCGCAAGCCAGCACCTCGGTGCTCGGCTCGCTGGTCAGCGCAGCGGCCGGCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3797188‑3797037 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgagcCGAGCACCGAGGTGCTGGCTTGCGGATCACCTGCACGCAGCCCGGCGATCTTCACCGCCAGCTTGTCGACGAAAGCGTCGGCAATACAGCTGTCCACCACAAGGCGCTCGGTGGACATGCAGATCTGCCCCTGGTTGAAGTAGGCACCG > NC_002947/3797067‑3797215 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |