New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3522813	65 (0.890)	5 (0.070)	4/242	NT	6.7%	intergenic (+557/‑140)	PP_5584/PP_3113	hypothetical protein/transposase
	?	NC_002947	= 3522862	76 (1.070)					intergenic (+606/‑91)	PP_5584/PP_3113	hypothetical protein/transposase

AGGCCGGTGAGGTAGGGCAGCGGGTCCGGTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGATTTCTTTCTGGAGCTCGCCGACCATGATGCGAC  >  NC_002947/3522668‑3522962                                                                                                                                                  |                                                                                                                                                        aGGCCGGTGAGGTAGGGCAGCGGGTCCGGTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGGTCAGCCGCGGCGCGTTGGTCACCCCGCACATGCCGATg                                                                                                                                                     >  1:179708/1‑150 (MQ=255)          aGGTAGGGCAGCGGGTCCGGTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGcc                                                                                                                                            >  1:780821/1‑150 (MQ=255)           ggTAGGGCAGCGGGTCCGGTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCt                                                                                                                                           <  1:1801550/150‑1 (MQ=255)            gTAGGGCAGCGGGTCCGGTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCCCGACCATGTCGTTCAACATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTg                                                                                                                                          >  2:462351/1‑150 (MQ=255)            gTAGGGCAGCGGGTCCGGTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTg                                                                                                                                          <  1:259906/150‑1 (MQ=255)             tAGGGCAGCGGGTCCGGTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTgg                                                                                                                                         >  1:1535747/1‑150 (MQ=255)               gggCAGCGGGTCCGGTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGc                                                                                                                                       <  2:588567/150‑1 (MQ=255)                 gCAGCGGGTCCGGTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCAt                                                                                                                                     <  1:967914/150‑1 (MQ=255)                     cGGGTCCGGTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCATTCTTTGATGGTGCGTTGGTCACCAAGCACATGCCGATGCCATGGGCCTGGGCATGCTc                                                                                                                                 <  2:1442005/150‑1 (MQ=255)                       ggTCCGGTTTGGGCCGTGCGAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCca                                                                                                                               <  2:1275205/150‑1 (MQ=255)                           cGGTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCcagcag                                                                                                                           >  1:1939025/1‑150 (MQ=255)                            ggTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAgg                                                                                                                          <  1:586365/150‑1 (MQ=255)                             gTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGgc                                                                                                                         <  2:1414795/150‑1 (MQ=255)                              tttGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGgcg                                                                                                                        <  1:439628/150‑1 (MQ=255)                                 gggCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCaa                                                                                                                     <  1:1338931/150‑1 (MQ=255)                                  ggCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCaa                                                                                                                     <  2:1891927/149‑1 (MQ=255)                                  ggCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCaa                                                                                                                     >  1:1891927/1‑149 (MQ=255)                                    ccGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCTGTGAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATACCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAg                                                                                                                  >  2:1036853/1‑150 (MQ=255)                                         ccAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCGGCCGCGGTGCGTTGGTCACCACGCACATGCC                                                                                                                                                         <  1:24475‑M1/106‑1 (MQ=255)                                         ccAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCGGCCGCGGTGCGTTGGTCACCACGCACATGCC                                                                                                                                                         >  2:24475‑M1/1‑106 (MQ=255)                                         ccAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑Tg                                                                                                           >  1:506332/1‑150 (MQ=255)                                              tctTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCAtt                                                                                                      >  1:1220356/1‑150 (MQ=255)                                                ttCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTgg                                                                                                    >  2:1528152‑M2/1‑148 (MQ=255)                                                 tCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCgatgccaggcctgttgcgcctgctggagcatgcccaggcccatggcatcggc                                                                                                     <  1:140271‑M1/150‑53 (MQ=255)                                                   ggCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATTCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTc                                                                                                 <  2:1257088/150‑1 (MQ=255)                                                   ggCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTc                                                                                                 <  2:6536/150‑1 (MQ=255)                                                       accaGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTaa                                                                                             <  2:1535747/150‑1 (MQ=255)                                                          aGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCaatgccaggcctgttgcgcctgctggagcatgcccaggcccatggcatcggcatgtgcgtg                                                                                            <  2:428268‑M1/150‑62 (MQ=255)                                                           gCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGt                                                                                               <  1:1940575/144‑1 (MQ=255)                                                           gCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGt                                                                                               >  2:1940575/1‑144 (MQ=255)                                                           gCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAgcgc                                                                                         >  2:48589/1‑150 (MQ=255)                                                            cacaTGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCt                                                                                        <  2:1274589/150‑1 (MQ=255)                                                            cacaTGTTCAAAGTGCTGGCCCAGACCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCgatgccatgggcctgttgcgcctgctggagcatgcccaggcccatggcatcggcatgtgcgtg                                                                                          <  1:1519583‑M1/150‑64 (MQ=255)                                                              caTGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTcc                                                                                      <  1:54048/150‑1 (MQ=255)                                                               aTGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCa                                                                                     >  1:122941/1‑150 (MQ=255)                                                                 gTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATg                                                                                   >  1:261691/1‑150 (MQ=255)                                                                    cAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAAc                                                                                <  2:168721/150‑1 (MQ=255)                                                                      aaGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAAccc                                                                              >  2:435527/1‑150 (MQ=255)                                                                       aGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAAcccc                                                                             <  2:261691/150‑1 (MQ=255)                                                                         tGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCcac                                                                           <  2:1220356/150‑1 (MQ=255)                                                                             ggcccaggcccaTGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTc                                                                       <  2:1939025/150‑1 (MQ=255)                                                                                ccaggcccaTGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGCCACAACGCAAGTGAAGATGCCATGGGCTTGGGCATGTTCCAGCAGGCGCAACAGGCC‑‑TGCCATTGGCGCGTAAGCGCTCCATGAACCCCACATTCaaa                                                                    <  2:220734/150‑1 (MQ=255)                                                                                 caggcccaTGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAg                                                                   <  2:1761481/150‑1 (MQ=255)                                                                                      ccaTGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAAc                                                                                <  1:303009/132‑1 (MQ=255)                                                                                      ccaTGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAAc                                                                                >  2:303009/1‑132 (MQ=255)                                                                                      ccaTGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCtt                                                              >  2:689966/1‑150 (MQ=255)                                                                                         tGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTAcc                                                           >  1:1243709/1‑150 (MQ=255)                                                                                              ttCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCaatgccaggcctgttgcgcctgctggagcatgcccaggcccatggc                                                                                                           >  2:1741379‑M1/1‑53 (MQ=255)                                                                                              ttCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCaatgccaggcctgttgcgcctgctggagcatgcccaggcccatggc                                                                                                           <  1:1741379‑M1/99‑47 (MQ=255)                                                                                                 aGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATcccc                                                   <  2:122941/150‑1 (MQ=255)                                                                                                  gCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCg                                                  >  1:1142350/1‑150 (MQ=255)                                                                                                    aTGTGCTCGGCGTTCAGCCGCGGTACGTTGGTCACAACGCACATGCCGATGCCATTGGCCGGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGAt                                                >  2:118200/1‑150 (MQ=255)                                                                                                        gCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCGATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCtg                                            <  1:462351/150‑1 (MQ=255)                                                                                                        gCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCtg                                            <  1:48589/150‑1 (MQ=255)                                                                                                          tCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTc                                                                                       >  1:187630/1‑105 (MQ=255)                                                                                                          tCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTc                                                                                       <  2:187630/105‑1 (MQ=255)                                                                                                          tCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCtgtg                                          >  2:587523/1‑150 (MQ=255)                                                                                                             gCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTcc                                                                                      <  1:862131/103‑1 (MQ=255)                                                                                                             gCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTcc                                                                                      >  2:862131/1‑103 (MQ=255)                                                                                                             gCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTc                                       <  1:180914/150‑1 (MQ=255)                                                                                                                   aGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGAtt                                 <  1:1119966/150‑1 (MQ=255)                                                                                                                    gCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGAttt                                >  1:1793378/1‑150 (MQ=255)                                                                                                                      cgcgGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGAtttct                              <  1:381888/150‑1 (MQ=255)                                                                                                                       gcgGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGAtttctt                             >  2:1613273/1‑150 (MQ=255)                                                                                                                        cgGTGCGTTCTTCACCACGCACATGCCGATGCCATGGGCCTAGGCATACGCGAGCATGCGCAACAGGCC‑‑TGGTTCTGCCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGAtttcttt                            <  1:435527/150‑1 (MQ=21)                                                                                                                          gTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGATttctttct                          >  2:1590080/1‑150 (MQ=255)                                                                                                                          gTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGATttctttct                          <  2:506332/150‑1 (MQ=255)                                                                                                                             cGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGGGCTCCCGATTTCTTTCTGGa                       <  2:1142350/150‑1 (MQ=255)                                                                                                                                  gTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCaaa                                                                    <  1:687407/100‑1 (MQ=255)                                                                                                                                  gTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCaaa                                                                    >  2:687407/1‑100 (MQ=255)                                                                                                                                   tCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGATTTCTTTCTGGAGCTCGc                 <  1:277217/150‑1 (MQ=255)                                                                                                                                     accacGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGATTTCTTTCTGGAGCTCGCCg               <  2:780821/150‑1 (MQ=255)                                                                                                                                       cacGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCCCATGGCATCggcatgtgcgtggtgaccaacgcaccgcggctgaacgccgagcacatgctgaacgccatgggtctgggccagcactttgaacatgtg               <  1:1519583‑M2/150‑88 (MQ=255)                                                                                                                                       cacGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTggcatgtgcgtggtgaccaacgcaccgcggctgaacgccgagcacatgctgaacgccatgggcctgggccagcactttgaacatgtgct             <  2:428268‑M2/150‑90 (MQ=255)                                                                                                                                            acaTGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGATTTCTTTCTGGAGCTCGCCGACCatga        >  1:1242365/1‑150 (MQ=255)                                                                                                                                             caTGCCGATGGAATGGGCCTGGGCATGCTACAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCTCTCCATGAACCCCACACTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGATTTCTTTCTGGCGCTAGCCGACCatgat       <  2:179708/150‑1 (MQ=21)                                                                                                                                              aTGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGATTTCTTTCTGGAGCTCGCCGACCatgatg      <  1:1590080/150‑1 (MQ=255)                                                                                                                                                gCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGATTTCTTTCTGGAGCTCGCCGACCATGATGCg    >  2:1647056/1‑150 (MQ=255)                                                                                                                                                gCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATCggcatgtgcgtggtgaccaacgcaccgcggctgaacgccgagcacatgctgaacgccatgggcctgggccagcactttgaacatgtgctggtggccga    <  1:140271‑M2/150‑99 (MQ=255)                                                                                                                                                 ccaatgccaggcctgttgcgcctgctggagcatgcccaggcccatggcatcggcatgtgcgtggtgaccaacgcaccgcggctgaacgccgagcacatgctgaacgccatgggcctgggccagcactttgaacatgtgctggtggccgaa     >  2:1528152‑M1/1‑2 (MQ=255)                                                                                                                                                 ccGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCa                                                                      <  1:253185/83‑1 (MQ=255)                                                                                                                                                 ccGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCa                                                                      >  2:253185/1‑83 (MQ=255)                                                                                                                                                  cGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGATTTCTTTCTGGAg                      <  2:789379/130‑1 (MQ=255)                                                                                                                                                  cGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGATTTCTTTCTGGAg                      >  1:789379/1‑130 (MQ=255)                                                                                                                                                  cGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGATTTCTTTCTGGAGCTCGCCGACCATGATGCGAc  <  1:689966/150‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                        AGGCCGGTGAGGTAGGGCAGCGGGTCCGGTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCC‑‑TGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATTCAAAGCGCTTACCTGATCCCCGATGCTGTGCTCCCGATTTCTTTCTGGAGCTCGCCGACCATGATGCGAC  >  NC_002947/3522668‑3522962

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.