New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 273823273 (1.000)4 (0.060) 4/230 NT 5.1% coding (568/4494 nt) PP_2395 leucine‑rich repeat‑containing protein
?NC_002947 = 2738250 80 (1.180)coding (586/4494 nt) PP_2395 leucine‑rich repeat‑containing protein

CCGCCACGGCACGGTCAAACCCCCTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAGGGGGAGCTGCCGCGCCTGGCGGGCGACCTTGTGCTGGCCAGGCAACT  >  NC_002947/2738102‑2738395
                                                                                                                                                    |                                                                                                                                                 
ccGCCACGGCACGGTCAAACCCCCTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGc                                                                                                                                                  >  1:482978‑M2/1‑149 (MQ=255)
ccGCCACGGCACGGTCAAACCCCCTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGc                                                                                                                                                  <  1:1800587‑M2/150‑2 (MQ=255)
  gCCACGGCACGGTCAAACCCCCTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGcca                                                                                                                                                >  2:1800587‑M2/1‑147 (MQ=255)
    cacggcacggTCAAACCCCCTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGccagg                                                                                                                                              <  1:928858‑M2/150‑6 (MQ=255)
            ggTCAAACCCCCTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTacac                                                                                                                                      >  1:291242/1‑150 (MQ=255)
                  aCCCCCTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCt                                                                                                                                >  2:1368243/1‑150 (MQ=255)
                   cccccTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCtt                                                                                                                               <  1:1368243/150‑1 (MQ=255)
                     cccTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTtgt                                                                                                                             <  2:291242/150‑1 (MQ=255)
                      ccTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTtgtg                                                                                                                            >  2:1652031/1‑150 (MQ=255)
                        tACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGa                                                                                                                          <  1:359276/150‑1 (MQ=255)
                           aaGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGc                                                                                                                       <  1:1112976/150‑1 (MQ=255)
                              cATCGAGGTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTa                                                                                                                    <  2:786195/150‑1 (MQ=255)
                                tCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTAc                                                                                                                   <  1:1135560/149‑1 (MQ=255)
                                tCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTAc                                                                                                                   >  2:1135560/1‑149 (MQ=255)
                                  gAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACaaa                                                                                                                <  2:1761072/150‑1 (MQ=255)
                                       tGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCcag                                                                                                           <  2:928858/150‑1 (MQ=255)
                                          cGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCTGTTCGCCTAGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCcaggca                                                                                                        >  1:1790077/1‑150 (MQ=255)
                                              cTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCaggag                                                                                                    <  1:205291/150‑1 (MQ=255)
                                                  gtCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGaa                                                                                                <  2:1489218/150‑1 (MQ=255)
                                                   tCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAAc                                                                                               >  1:349498/1‑150 (MQ=255)
                                                      tGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCTCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCt                                                                                            <  1:1100303/150‑1 (MQ=255)
                                                          cTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGAt                                                                                        >  1:71632/1‑150 (MQ=255)
                                                          cTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGAt                                                                                        <  1:1652031/150‑1 (MQ=255)
                                                            ggACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGc                                                                                      >  1:1386717/1‑150 (MQ=255)
                                                             gACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTtgtg                                                                                                                            <  2:745224/111‑1 (MQ=255)
                                                             gACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTtgtg                                                                                                                            >  1:745224/1‑111 (MQ=255)
                                                             gACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGcc                                                                                     <  1:588365/150‑1 (MQ=255)
                                                                   ggTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGCTCGCCTGATTTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGaa                                                                               <  1:718203/150‑1 (MQ=255)
                                                                      gAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACaaa                                                                                                                <  1:867911/114‑1 (MQ=255)
                                                                      gAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACaaa                                                                                                                >  2:867911/1‑114 (MQ=255)
                                                                          gcTATCAACGTCATATGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACTATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAAtg                                                                        <  2:874982/150‑1 (MQ=255)
                                                                           cTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAAtgt                                                                       <  2:1386717/150‑1 (MQ=255)
                                                                              tCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTgg                                                                                                                           >  1:342527/1‑95 (MQ=255)
                                                                              tCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTgg                                                                                                                           <  2:342527/95‑1 (MQ=255)
                                                                               cAACGTCATCTGGATGCCACCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGAtg                                                                   <  1:634335/150‑1 (MQ=255)
                                                                                 aCGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACaaa                                                                                                                <  1:893157/103‑1 (MQ=255)
                                                                                 aCGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACaaa                                                                                                                >  2:893157/1‑103 (MQ=255)
                                                                                  cGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCca                                                                                                            <  1:269992/106‑1 (MQ=255)
                                                                                  cGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCca                                                                                                            >  2:269992/1‑106 (MQ=255)
                                                                                   gTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGAtggtgg                                                               <  1:1224411/150‑1 (MQ=255)
                                                                                       tCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCtgt                                                           >  1:687774/1‑150 (MQ=255)
                                                                                          ggATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTtgtg                                                                                                                            >  2:1528720/1‑82 (MQ=255)
                                                                                          ggATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTtgtg                                                                                                                            <  1:1528720/82‑1 (MQ=255)
                                                                                          ggATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCtgtgtg                                                        >  1:1882876/1‑150 (MQ=255)
                                                                                           gttccgaTCCTAACGCCAGCAGGCACTGCCGCGCGCCTGGTATCGCAGCTTGCACATACCAGGCGCTACACCATGCTTGTGGACGCCTCCAAAGCCAGGCAGGAGGGAATGATGGACGCCACCGGACTCAACGTGACGCTGGCtgcgtgg                                                       >  2:16361/7‑149 (MQ=255)
                                                                                           gATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGc                                                       >  2:1176406/1‑150 (MQ=255)
                                                                                           gATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGc                                                       >  2:1176327/1‑150 (MQ=255)
                                                                                                cATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACaaa                                                                                                                <  2:1886897/88‑1 (MQ=255)
                                                                                                cATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGaa                                                  >  1:1730659/1‑150 (MQ=255)
                                                                                                cATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGGGGACGCCTACaaa                                                                                                                >  1:1886897/1‑88 (MQ=255)
                                                                                                 aTCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAg                                                 >  2:1763257/1‑150 (MQ=255)
                                                                                                  tCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAgg                                                <  1:1176327/150‑1 (MQ=255)
                                                                                                  tCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAgg                                                <  1:1176406/150‑1 (MQ=255)
                                                                                                    cTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAgggg                                              <  2:1882876/150‑1 (MQ=255)
                                                                                                    cTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAgggg                                              <  1:1740172/150‑1 (MQ=255)
                                                                                                     tCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGc                                                       >  1:858931/1‑140 (MQ=255)
                                                                                                     tCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGc                                                       <  2:858931/140‑1 (MQ=255)
                                                                                                     tCACGCCCGCTGGCAATGCCGAGCGCCTGGGGTCTCAGCTTGGATATGCGAGGCGCTACACCGTGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAggggg                                             >  2:98679/1‑150 (MQ=255)
                                                                                                           ccGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGAt                                                                    <  2:31556/121‑1 (MQ=255)
                                                                                                           ccGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGAt                                                                    >  1:31556/1‑121 (MQ=255)
                                                                                                                 gCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGaa                                                  <  2:149627/133‑1 (MQ=255)
                                                                                                                 gCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGaa                                                  >  1:149627/1‑133 (MQ=255)
                                                                                                                   aaTGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTtgt                                                                                                                             <  2:1400766/56‑1 (MQ=255)
                                                                                                                   aaTGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTtgt                                                                                                                             >  1:1400766/1‑56 (MQ=255)
                                                                                                                   aaTGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAGGGGGAGCTGCCGCGCCTg                               >  1:730795/1‑150 (MQ=255)
                                                                                                                      gCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCcagg                                                                                                          <  1:1063380/72‑1 (MQ=255)
                                                                                                                      gCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCcagg                                                                                                          >  2:1063380/1‑72 (MQ=255)
                                                                                                                       ccGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAGGGGGAGCTGCCGCGCCTggcgg                           <  2:1730659/150‑1 (MQ=255)
                                                                                                                       ccGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAGGGGGAGCTGCCGCGCCTggcgg                           <  1:1071641/150‑1 (MQ=255)
                                                                                                                        cgcgcgcCTGGGGGCGCAGCTTGTAGCTGCCAGGCGCGACACCATGCTTGTGGACGCCTACAAAGCCATGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGGGATGGTGGCTGTGTGCGAGAAGGGGGAGCTGCCGCGCCTggcggg                          <  1:517314/147‑1 (MQ=255)
                                                                                                                             gcCTGGTGTCTCAGCTTGTAGATGccaggcgctcggcattgccagcgggcgtgaggatggcatccagatgacgttgatagcgctca                                                                                     >  1:1067216‑M2/1‑24 (MQ=255)
                                                                                                                             gcCTGGTGTCTCAGCTTGTAGATGccaggcgctcggcattgccagcgggcgtgaggatggcatccagatgacgttgatagcgctca                                                                                     <  2:1067216‑M2/86‑63 (MQ=255)
                                                                                                                             gcCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAGGGGGAGCTGCCGCGCCTGGCGGGCGAcc                     <  2:71632/150‑1 (MQ=255)
                                                                                                                               cTGGTGTCTCAGCTTGTAGATGccaggcgctcggcattgccagcgggcgtgaggatggcatccagatgacgttgatagcgctcacccaggtccagctcacgacacagtc                                                            <  2:1615384‑M2/109‑88 (MQ=255)
                                                                                                                               cTGGTGTCTCAGCTTGTAGATGccaggcgctcggcattgccagcgggcgtgaggatggcatccagatgacgttgatagcgctcacccaggtccagctcacgacacagtc                                                            >  1:1615384‑M2/1‑22 (MQ=255)
                                                                                                                                tGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGAtggt                                                                 <  1:1872578/103‑1 (MQ=255)
                                                                                                                                tGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGAtggt                                                                 >  2:1872578/1‑103 (MQ=255)
                                                                                                                                tGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAGGGGGAGCTGCCGCGCCTGGCGGGCGACCTtg                  >  1:1427108/1‑150 (MQ=255)
                                                                                                                                      ctcAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAGGGGGAGCTGCCGCGCCTGGCGGGCGACCTTGTGCTgg            <  2:1790077/150‑1 (MQ=255)
                                                                                                                                          gCTTGTAGATGCCAGGCGCTACACCATGCCTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAGGGGGAGCTGCCGCGCCTggcggg                          <  2:514407/132‑1 (MQ=255)
                                                                                                                                          gCTTGTAGATGCCAGGCGCTACACCATGCCTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAGGGGGAGCTGCCGCGCCTggcggg                          >  1:514407/1‑132 (MQ=255)
                                                                                                                                           cTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACaaa                                                                                                                >  1:977876/1‑45 (MQ=255)
                                                                                                                                           cTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACaaa                                                                                                                <  2:977876/45‑1 (MQ=255)
                                                                                                                                           cTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAGGGGGAGCTGCCGCGCCTg                               <  2:1034510/126‑1 (MQ=255)
                                                                                                                                           cTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAGGGGGAGCTGCCGCGCCTg                               >  1:1034510/1‑126 (MQ=255)
                                                                                                                                            ttGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAGGGGGAGCTGCCGCGCCTGGCGGGCGACCTTGTGCTGGCCAGGc      >  1:350806/1‑150 (MQ=255)
                                                                                                                                              gTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAGGGGGAGCTGCCGCGCCTGGCGGGCGACCTTGTGCTGGCCAGGCaa    <  2:730795/150‑1 (MQ=255)
                                                                                                                                               tAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAAc                                                                              <  2:124282/75‑1 (MQ=255)
                                                                                                                                               tAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAAc                                                                              >  1:124282/1‑75 (MQ=255)
                                                                                                                                                aGATGCCAGGCGCGACACCATGCGTGTGGACGCCTACAAAGCCAGGCAGTAGGGAACGCTGGATGCCAGCGAACTCAATGTGGTGGTGGCTGTGTGCGAGAAGGGGGAGCGGCCGCGCCTGGCGGGCGACCTTGTGCTGGCCAGGCAACt  <  1:16361/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
CCGCCACGGCACGGTCAAACCCCCTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGTGTCTCAGCTTGTAGATGCCAGGCGCTACACCATGCTTGTGGACGCCTACAAAGCCAGGCAGGAGGGAACGCTGGATGCCAGCGAACTCAATGTGATGGTGGCTGTGTGCGAGAAGGGGGAGCTGCCGCGCCTGGCGGGCGACCTTGTGCTGGCCAGGCAACT  >  NC_002947/2738102‑2738395

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.