| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2738232 | 73 (1.000) | 4 (0.060) | 4/230 | NT | 5.1% | coding (568/4494 nt) | PP_2395 | leucine‑rich repeat‑containing protein |
| ? | NC_002947 | = 2738250 | 80 (1.180) | coding (586/4494 nt) | PP_2395 | leucine‑rich repeat‑containing protein | |||||
GCCGCGCGGTAACCGCCTGCTGCTTCCCCGCCACGGCACGGTCAAACCCCCTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2738075‑2738232‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcctggCATCTACAAGCTGAGACACCAGGCGCTCGGCATTGCCAGCGGGCGTGAGGATGGCATCCAGATGACGTTGATAGCGCTCACCCAGGTCCAGCTCACGACACAGTCCGGCAAACTCGATGCTTGTAGGGGGTTTGACCGTGCCGTGGCGG < NC_002947/2738250‑2738102 GCCGCGCGGTAACCGCCTGCTGCTTCCCCGCCACGGCACGGTCAAACCCCCTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGA < 2:1005504/150‑1GCCGCGCGGTAACCGCCTGCTGCTTCCCCGCCACGGCACGGTCAAACCCCCTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGA < 2:302502/150‑1 CGCGGTAACCGCCTGCTGCTTCCCCGCCACGGCACGGTCAAACCCCCTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGC < 1:85124/150‑1 GGTAACCGCCTGCTGCTTCCCCGCCACGGCACGGTCAAACCCCCTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTG < 1:1566123/150‑1 GACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGCATCTACAAGCTGAGACACCAG > 1:1615384/1‑109 GACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGCATCTACAAGCTGAGACACCAG < 2:1615384/109‑1 TGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGCATCTACAAGCTGAGACACCAGGC > 1:1067216/1‑86 TGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGGCATCTACAAGCTGAGACACCAGGC < 2:1067216/86‑1 CCTGGCATCTACAAGCTGAGACACCAGGCGCTCGGCATTGCCAGCGGGCGTGAGGATGGCATCCAGATGACGTTGATAGCGCTCACCCAGGTCCAGCTCACGACACAGTCCGGCAAACTCGATGCTTGTAGGGGGTTTGACCGTGCCGTG < 1:928858/150‑1 TGGCATCTACAAGCTGAGACACCAGGCGCTCGGCATTGCCAGCGGGCGTGAGGATGGCATCCAGATGACGTTGATAGCGCTCACCCAGGTCCAGCTCACGACACAGTCCGGCAAACTCGATGCTTGTAGGGGGTTTGACCGTGCCGTGGC > 2:1800587/1‑150 GCATCTACAAGCTGAGACACCAGGCGCTCGGCATTGCCAGCGGGCGTGAGGATGGCATCCAGATGACGTTGATAGCGCTCACCCAGGTCCAGCTCACGACACAGTCCGGCAAACTCGATGCTTGTAGGGGGTTTGACCGTGCCGTGGCGG < 1:1800587/150‑1 GCATCTACAAGCTGAGACACCAGGCGCTCGGCATTGCCAGCGGGCGTGAGGATGGCATCCAGATGACGTTGATAGCGCTCACCCAGGTCCAGCTCACGACACAGTCCGGCAAACTCGATGCTTGTAGGGGGTTTGACCGTGCCGTGGCGG > 1:482978/1‑150 GCCGCGCGGTAACCGCCTGCTGCTTCCCCGCCACGGCACGGTCAAACCCCCTACAAGCATCGAGTTTGCCGGACTGTGTCGTGAGCTGGACCTGGGTGAGCGCTATCAACGTCATCTGGATGCCATCCTCACGCCCGCTGGCAATGCCGAGCGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2738075‑2738232‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcctggCATCTACAAGCTGAGACACCAGGCGCTCGGCATTGCCAGCGGGCGTGAGGATGGCATCCAGATGACGTTGATAGCGCTCACCCAGGTCCAGCTCACGACACAGTCCGGCAAACTCGATGCTTGTAGGGGGTTTGACCGTGCCGTGGCGG < NC_002947/2738250‑2738102 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |