| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5463197 | 59 (0.810) | 5 (0.080) | 5/226 | NT | 7.6% | coding (201/939 nt) | PP_4799 | muramoyltetrapeptide carboxypeptidase |
| ? | NC_002947 | = 5463225 | 68 (1.020) | coding (173/939 nt) | PP_4799 | muramoyltetrapeptide carboxypeptidase | |||||
GCGGTGATGTCGCTGTAGCCGATCAGCGGCTTGGGGTTGCGCCGGATCAGTTCAAAGTCGAGCTGGTCAAGCAGGCGCATGCTGCCGTAGCCCCCACGCATGCACAGGATGGCGTCCATGGCCGGATCGGCAAACGCTGCATGCAAGTCCTGCAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5463039‑5463197‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcaggcgcAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTTGCATGCAGCGTTTGCCGATCCGGCCATGGACGCCATCCTGTGCATGCGTGGGGGCTACGGCAGCATGCGCCTGCTTGACCAGCTCGACTTTGAACTGATCCG < NC_002947/5463225‑5463081 GCGGTGATGTCGCTGTAGCCGATCAGCGGCTTGGGGTTGCGCCGGATCAGTTCAAAGTCGAGCTGGTCAAGCAGGCGCATGCTGCCGTAGCCCCCACGCATGCACAGGATGGCGTCCATGGCCGGATCGGCAAACGCTGCATGCAAGTCC > 2:234675/1‑150 GTGATGTCGCTGTAGCCGATCAGCGGCTTGGGGTTGCGCCGGATCAGTTCAAAGTCGAGCTGGTCAAGCAGGCGCATGCTGCCGTAGCCCCCACGCATGCACAGGATGGCGTCCATGGCCGGATCGGCAAACGCTGCATGCAAGTCCTGC < 1:1141023/150‑1 GTCGCTGTAGCCGATCAGCGGCTTGGGGTTGCGCCGGATCAGTTCAAAGTCGAGCTGGTCAAGCAGGCGCATGCTGCCGTAGCCCCCACGCATGCACAGGATGGCGTCCATGGCCGGATCGGCAAACGCTGCATGCAAGTCCTGCAGGCG > 1:1528557/1‑150 GCTGTAGCCGATCAGCGGCTTGGGGTTGCGCCGGATCAGTTCAAAGTCGAGCTGGTCAAGCAGGCGCATGCTGCCGTAGCCCCCACGCATGCACAGGATGGCGTCCATGGCCGGATCGGCAAACGCTGCATGCAAGTCCTG > 1:1073277/1‑141 GCTGTAGCCGATCAGCGGCTTGGGGTTGCGCCGGATCAGTTCAAAGTCGAGCTGGTCAAGCAGGCGCATGCTGCCGTAGCCCCCACGCATGCACAGGATGGCGTCCATGGCCGGATCGGCAAACGCTGCATGCAAGTCCTG < 2:1073277/141‑1 CTGTAGCCGATCAGCGGCTTGGGGTTGCGCCGGATCAGTTCAAAGTCGAGCTGGTCAAGCAGGCGCATGCTGCCGTAGCCCCCACGCATGCACAGGATGGCGTCCATGGCCGGATCGGCAAACGCTGCATGCAAGTCCTGCAGGCGCggc < 2:256546/150‑4 GCGGCTTGGGGTTGCGCCGGATCAGTTCAAAGTCGAGCTGGTCAAGCAGGCGCATGCTGCCGTAGCCCCCACGCATGCACAGGATTGCGTCCATGGCCGGATCGGCAAACGCTGCATGCACGTCCTGCAGGCGCTGGACTACCTGGCGGG > 2:110348/1‑150 TCAGTTCAAAGTCGAGCTGGTCAAGCAGGCGCATGCTGCCGTAGCCCCCACGCATGCACAGGATTGCGTCCATGGCCGGATCGGCAAACGCTGCATGCAAGTCCTGCAGGCGCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCA < 1:110348/150‑1 AAGTCGAGCTGGTCAAGCAGGCGCATGCTGCCGTAGCCCCCACGCATGCACAGGATGGCGTCCATGGCCGGATCGGCAAACGCTGCATGCAAGTCCTGCAGGCGCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTTGC < 1:386515/150‑1 TGGTCAAGCAGGCGCATGCTGCCGTAGCCCCCACGCATGCACAGGATGGCGTCCATGGCCGGATCGGCAAACGCTGCATGCAAGTCCTGCAGGCGCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTT < 2:1596374/139‑1 TGGTCAAGCAGGCGCATGCTGCCGTAGCCCCCACGCATGCACAGGATGGCGTCCATGGCCGGATCGGCAAACGCTGCATGCAAGTCCTGCAGGCGCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTT > 1:1596374/1‑139 CCTGCAGGCGCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTTGCATGCAGCGTTTGCCGATCCGGCCATGGACGCCATCCTGTGCATGCGTGGGGGCTACGGCAGCATGCGCCTGCTTGAC > 2:1389125/1‑133 CCTGCAGGCGCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTTGCATGCAGCGTTTGCCGATCCGGCCATGGACGCCATCCTGTGCATGCGTGGGGGCTACGGCAGCATGCGCCTGCTTGAC < 1:1389125/133‑1 CCTGCAGGCGCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTTGCATGCAGCGTTTGCCGATCCGGCCATGGACGCCATCCTGTGCATGCGTGGGGGCTACGG > 1:1642485/1‑114 CCTGCAGGCGCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTTGCATGCAGCGTTTGCCGATCCGGCCATGGACGCCATCCTGTGCATGCGTGGGGGCTACGG < 2:1642485/114‑1 TGCAGGCGCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTTGCATGCAGCGTTTGCCGATCCGGCCATGGACGCCATCCTGTGCATGCGTGGGGGCTACGGCAGCATGCGCCTGCTTGACCAGCTCGACTTTGAACTGA < 2:777764/150‑1 TGCAGGCGCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTTGCATGCAGCGTTTGCCGATCCGGCCATGGACGCCATCCTGTGCATGCGTGGGGGCTACGGCAGCATGCGCCTGCTTGACCAGCTCGACTTTGAAC > 1:1921401/1‑147 TGCAGGCGCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTTGCATGCAGCGTTTGCCGATCCGGCCATGGACGCCATCCTGTGCATGCGTGGGGGCTACGGCAGCATGCGCCTGCTTGACCAGCTCGACTTTGAAC < 2:1921401/147‑1 CAGGCGCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTTGCATGCAGCGTTTGCCGATCCGGCCATGGACGCCATCCTGTGCATGCGTGGGGGCTACGGCAGCATGCGCCTGCTTGACCAGCTCGACTTTGAACTGATC > 1:578957/1‑150 GGCGCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTTGCATGCAGCGTTTGCGGATCCGGCCATGGACGCCATCCTGTGCATGCGTGGGGGCTACGGCAGCATGCGCCTGCTTGACCAGCTCGACTTTGAACTGATCCG < 2:1298618/150‑1 GCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTTGCATGCAGCGTTTGCCGATCCGGCCATGGACGCCATCCTGTGCATGCGTGGGGGCTACGGCAGCATGCGCCTGCTT > 1:834373/1‑121 GCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTTGCATGCAGCGTTTGCCGATCCGGCCATGGACGCCATCCTGTGCATGCGTGGGGGCTACGGCAGCATGCGCCTGCTT < 2:834373/121‑1 GCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTTGCATGCAGCGTTTGCCGATCCGGCCATGGAC > 1:1836977/1‑76 GCAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTTGCATGCAGCGTTTGCCGATCCGGCCATGGAC < 2:1836977/76‑1 GCGGTGATGTCGCTGTAGCCGATCAGCGGCTTGGGGTTGCGCCGGATCAGTTCAAAGTCGAGCTGGTCAAGCAGGCGCATGCTGCCGTAGCCCCCACGCATGCACAGGATGGCGTCCATGGCCGGATCGGCAAACGCTGCATGCAAGTCCTGCAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5463039‑5463197‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcaggcgcAGGGCTACCTGGCGGGGCCGGACCAGCAGCGCCTGCAGGACTTGCATGCAGCGTTTGCCGATCCGGCCATGGACGCCATCCTGTGCATGCGTGGGGGCTACGGCAGCATGCGCCTGCTTGACCAGCTCGACTTTGAACTGATCCG < NC_002947/5463225‑5463081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |