| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4845374 = | 99 (1.360) | 6 (0.090) | 6/238 | NT | 6.1% | coding (79/2475 nt) | PP_4261 | cation‑transporting P‑type ATPase |
| ? | NC_002947 | 4845403 = | 91 (1.300) | coding (108/2475 nt) | PP_4261 | cation‑transporting P‑type ATPase | |||||
GTCGTACAGGGCCAGTTCGTCCTGTAGTTGTTTGGGCAGGGCTTCGGGGTTGGCGCTGTTGTCGCTGCGGTGTTGGTAGTAATGTTCCAGGCCTCCAGCGACGATCGACTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4845526‑4845374‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCCGAAGCCCTGCCCAAACAACTACAGGACGAACTGGCCCTGTACGACCGCAGCGACGTGCAGCAAAC > NC_002947/4845403‑4845546 GTCGTACAGGGCCAGTTCGTGCTGTAGTTGTTTGGGCAGGGCTTCGGGGTTGGCGCTGTTGTCGCTGCGGTGTTGGTAGTAATGTTCCAGGCCTCCAGCGACGATCGACTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGG < 1:98994/150‑1GTCGTACAGGGCCAGTTCGTCCTGTAGTTGTTTGGGCAGGGCTTCGGGGTTGGCGCTGTTGTCGCTGCGGTGTTGGTAGTAATGTTCCAGGCCTCCAGCGACGATCGACTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGG > 1:1431323/1‑150 GTACAGGGCCAGTTCGTCCTGTAGTTGTTTGGGCAGGGCTTCGGGGTTGGCGCTGTTGTCGCTGCGGTGTTGGTAGTAATGTTCCAGGCCTCCAGCGACGATCGACAGCAGCGGCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGGCTG > 1:1476825/1‑150 GTTGTCGCTGCGGTGTTGGTAGTAATGTTCCAGGCCTCCAGCGACGATCGACTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGGCT > 1:478405/1‑95 GTTGTCGCTGCGGTGTTGGTAGTAATGTTCCAGGCCTCCAGCGACGATCGACTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGGCT < 2:478405/95‑1 TTCCAGGCCTCCAGCGACGATCGACTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGG > 1:1661387/1‑66 TTCCAGGCCTCCAGCGACGATCGACTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGG < 2:1661387/66‑1 GCGACGATCGACTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGGC‑‑‑‑‑‑‑‑‑‑TGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGC < 1:1892695/116‑1 GCGACGATCGACTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGGC‑‑‑‑‑‑‑‑‑‑TGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGC > 2:1892695/1‑116 ACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCCGAAGCCCTGC < 1:1225193/127‑1 ACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCCGAAGCCCTGC > 2:1225193/1‑127 CCGGGGCAGCAGAACTGCCGGGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACA < 1:1034344/68‑1 CCGGGGCAGCAGAACTGCCGGGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACA > 2:1034344/1‑68 ccGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCCGAAGCCCTGCCCAAACAACTACAGGACGAACTGGCCCTGTACGACCGCAGCGACGTGCAGCAAAC < 1:1645646/148‑1 GTCGTACAGGGCCAGTTCGTCCTGTAGTTGTTTGGGCAGGGCTTCGGGGTTGGCGCTGTTGTCGCTGCGGTGTTGGTAGTAATGTTCCAGGCCTCCAGCGACGATCGACTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4845526‑4845374‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCCGAAGCCCTGCCCAAACAACTACAGGACGAACTGGCCCTGTACGACCGCAGCGACGTGCAGCAAAC > NC_002947/4845403‑4845546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |