New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4682567	66 (0.900)	5 (0.070)	4/232	NT	7.2%	coding (811/1431 nt)	mltD	membrane‑bound lytic murein transglycosylase D
	?	NC_002947	= 4682588	68 (1.000)					coding (832/1431 nt)	mltD	membrane‑bound lytic murein transglycosylase D

CATCGAGCGCAACGAAAGGCTCGGCCTGCCGACCGACTACTGGAACCTGCCGCTGCCACAGGAAACCCGCGACTACGTACCCAAGTTGCTGGCACTGTCGCAGGTGGTGTCCACGCCAGAAGCCTATGGTGTCAATCTCACCCCGATCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4682416‑4682567 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcgccaCCGCTTCAAAGTACGGTTCGTTGGCGATCGGGGTGAGATTGACACCATAGGCTTCTGGCGTGGACACCACCTGCGACAGTGCCAGCAACTTGGGTACGTAGTCGCGGGTTTCCTGTGGCAGCGGCAGGTTCCAGTAGTCGGTCGGCAGG  <  NC_002947/4682588‑4682440                                                                                                                                                                                                                                                                                                               CATCGAGCGCAACGAAAGGCTCGGCCTGCCGACCGACTACTGGAACCTGCCGCTGCCACAGGAAACCCGCGACTACGTACCCAAGTTGCTGGCACTGTCGCAGGTGGTGTCCACGCCAGAAGCCTATGGTGTCAATCTCACCCCGATCGC                                                                                                                                                         >  2:73498/1‑150                                  CGACTACTGGAACCTGCCGCTGCCACAGGAAACCCGCGACTACGTACCCAAGTTGCTGGCACTGTCGCAGGTGGTGTCCACGCCAGAAGCCTATGGTGTCAATCTCACCCCGATCGCCACCGCTTCAAAGTACGGTTCGTTGGCGATCGG                                                                                                                        <  2:1239564/150‑1                                                             GGAAACCCGCGACTACGTACCCAAGTTGCTGGCACTGTCGCAGGTGGTGTCCACGCCAGAAGCCTATGGTGTCAATCTCACCCCGATCGCCACCGCTTCAAAGTACGGTTCGTTGGCGATCGG                                                                                                                        >  1:987802/1‑123                                                             GGAAACCCGCGACTACGTACCCAAGTTGCTGGCACTGTCGCAGGTGGTGTCCACGCCAGAAGCCTATGGTGTCAATCTCACCCCGATCGCCACCGCTTCAAAGTACGGTTCGTTGGCGATCGG                                                                                                                        <  2:987802/123‑1                                                                   CCGCGACTACGTACCCAAGTTGCTGGCACTGTCGCAGGTGGTGTCCACGCCAGAAGCCTATGGTGTCAATCTCACCCCGATCGCCACCGCTTCAAAGTACGGTTCGTTGGCGATCGGGG                                                                                                                      <  1:240731/119‑1                                                                   CCGCGACTACGTACCCAAGTTGCTGGCACTGTCGCAGGTGGTGTCCACGCCAGAAGCCTATGGTGTCAATCTCACCCCGATCGCCACCGCTTCAAAGTACGGTTCGTTGGCGATCGGGG                                                                                                                      >  2:240731/1‑119                                                                                                                                                  ATCGCCACCGCTTCAAAGTACGGTTCGTTGGCGATCGGGGTGAGATTGACACCATAGGCTTCTGGCGTGGACACCACCTGC                                                                             <  1:985675/81‑1                                                                                                                                                  ATCGCCACCGCTTCAAAGTACGGTTCGTTGGCGATCGGGGTGAGATTGACACCATAGGCTTCTGGCGTGGACACCACCTGC                                                                             >  2:985675/1‑81                                                                                                                                                     GCCACCGCTTCAAAGTACGGTTCGTTGGCGATCGGGGTGAGATTGACACCATAGGCTTCTGGCGTGGACACCACCTGCGACAGTGCCAGCAACTTGGGTACGTAGTCGCGGGTTTCCTGTGGCAGCGGCAGGTTCCAGTAGTCGGTCGGC     >  2:1100167/1‑150                                                                                                                                                     GCCACCGCTTCAAAGTACGGTTCGTTGGCGATCGGGGTGAGATTGACACCATAGGCTTCTGGCGTGGACACCACCTGCGACAGTGCCAGCAACTTGGGTACGTAGTCGCGGGTTTCCTGTGGCAGCGGCAGGTTCCA                  <  1:1271167/137‑1                                                                                                                                                     GCCACCGCTTCAAAGTACGGTTCGTTGGCGATCGGGGTGAGATTGACACCATAGGCTTCTGGCGTGGACACCACCTGCGACAGTGCCAGCAACTTGGGTACGTAGTCGCGGGTTTCCTGTGGCAGCGGCAGGTTCCA                  >  2:1271167/1‑137                                                                                                                                                        ACCGCTTCAAAGTACGGTTCGTTGGCGATCGGGGTGAGATTGACACCATAGGCTTCTGGCGTGGACACCACCTGCGACAGTGCCAGCAACTTGGGTACGTAGTCGCGGGTTTCCTGTGGCAGCGGCAGGTTCCAGTAGTCGG          <  1:410621/142‑1                                                                                                                                                        ACCGCTTCAAAGTACGGTTCGTTGGCGATCGGGGTGAGATTGACACCATAGGCTTCTGGCGTGGACACCACCTGCGACAGTGCCAGCAACTTGGGTACGTAGTCGCGGGTTTCCTGTGGCAGCGGCAGGTTCCAGTAGTCGG          >  2:410621/1‑142                                                                                                                                                        ACCGCTTCAAAGTACGGTTCGTTGGCGATCGGGGTGAGATTGACACCATAGGCTTCTGGCGTGGACACCACCTGCGACAGTGCCAGCAACTCGGGTACGTAGTCGCGGGTTTCCTGTGGCAGCGGCAGGTTCCAGTAGTCGGTCGGCAGG  >  1:1039501/1‑150                                                                                                                                                                                                                                                                                                               CATCGAGCGCAACGAAAGGCTCGGCCTGCCGACCGACTACTGGAACCTGCCGCTGCCACAGGAAACCCGCGACTACGTACCCAAGTTGCTGGCACTGTCGCAGGTGGTGTCCACGCCAGAAGCCTATGGTGTCAATCTCACCCCGATCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4682416‑4682567 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcgccaCCGCTTCAAAGTACGGTTCGTTGGCGATCGGGGTGAGATTGACACCATAGGCTTCTGGCGTGGACACCACCTGCGACAGTGCCAGCAACTTGGGTACGTAGTCGCGGGTTTCCTGTGGCAGCGGCAGGTTCCAGTAGTCGGTCGGCAGG  <  NC_002947/4682588‑4682440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.