| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5292940 | 69 (0.950) | 4 (0.060) | 4/236 | NT | 5.2% | coding (1495/1527 nt) | mmsA‑II | methylmalonate‑semialdehyde dehydrogenase |
| ? | NC_002947 | = 5292973 | 79 (1.140) | coding (1462/1527 nt) | mmsA‑II | methylmalonate‑semialdehyde dehydrogenase | |||||
GCCAGCACGGCCTTGTTCAGGTCGAACAGGTTCAGCTGATGCCCGGCCTTGATCAGGTTGCGGGCCATGGGCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5292788‑5292940‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgtcACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCCCATGGCCCGCAACCTGATCAAGGCCGGGC < NC_002947/5292973‑5292828 GCCAGCACGGCCTTGTTCAGGTCGAACAGGTTCAGCTGATGCCCGGCCTTGATCAGGTTGCGGGCCATGGGCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACC < 1:644243/150‑1GCCAGCACGGCCTTGTTCAGGTCGAACAGGTTCAGCTGATGCCCGGCCTTGATCAGGTTGCGGGCCATGGGCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACC > 2:400522/1‑150 AGCACGGCCTTGTTCAGGTCGAACAGGTTCAGCTGATGCCCGGCCTTGATCAGGTTGCGGGCCATGGGCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTC < 1:951829/150‑1 GTTCAGCTGATGCCCGGCCTTGATCAGGTTGCGGGCCATGGGCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACA < 1:382778/119‑1 GTTCAGCTGATGCCCGGCCTTGATCAGGTTGCGGGCCATGGGCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACA > 2:382778/1‑119 CCGGCCTTGATCAGGTTGCGGGCCATGGGCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGT < 1:505928/150‑1 TGATCAGGTTGCGGGCCATGGGCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACA < 1:855222/150‑1 GTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACG < 1:1552214/77‑1 GTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACG > 2:1552214/1‑77 CCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCCCATGGCCCGCAACCTGAT > 1:356313/1‑140 CCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCCCATGGCCCGCAACCTGAT < 2:356313/140‑1 CGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGTATATCGCATTCATCGGCCTGGGCAACATGGGCGCGCCCATGGCCCGCAACCTGATCAAGGCCGGGC > 2:1727926/1‑150 CGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCCCATGGCCCGCAACCTGATCAAGGCCGGGC > 1:1754967/1‑150 CGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCCCATGGCCCGCAACCTGATCAAGGCCGGGC > 1:679478/1‑150 GCCAGCACGGCCTTGTTCAGGTCGAACAGGTTCAGCTGATGCCCGGCCTTGATCAGGTTGCGGGCCATGGGCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5292788‑5292940‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgtcACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCCCATGGCCCGCAACCTGATCAAGGCCGGGC < NC_002947/5292973‑5292828 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |