New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1221410	91 (1.250)	8 (0.110)	7/244	NT	8.4%	coding (1806/1908 nt)	PP_1067	sensor histidine kinase
	?	NC_002947	= 1221433	84 (1.170)					coding (1783/1908 nt)	PP_1067	sensor histidine kinase

AGGACGGTAAGAGGCGCTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCGTTGTCGCGCACCTGCAAACGGTACTTGTCACCCTGCAACTCGCCTT  >  NC_002947/1221286‑1221576                                                                                                                                                    |                                                                                                                                                aGGACGGTAAGAGGCGCTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGAca                                                                                                                                               <  2:1084584‑M2/150‑3 (MQ=255)   gACGGTAAGAGGCGCTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAgg                                                                                                                                             >  2:1665376/1‑150 (MQ=255)      ggTAAGAGGCGCTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTc                                                                                                                                          >  1:1103876/1‑150 (MQ=255)      ggTAAGAGGCGCTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTc                                                                                                                                          <  1:410770/150‑1 (MQ=255)       gTAAGAGGCGCTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTca                                                                                                                                         >  2:1578019/1‑150 (MQ=255)       gTAAGAGGCGCTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTca                                                                                                                                         <  2:854641/150‑1 (MQ=255)        tAAGAGGCGCTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACATGGTcag                                                                                                                                        >  1:1176122/1‑150 (MQ=255)         aggagGCGCTTGGTTCATGGATTCTCTGCCGATTCGCTAGGGTGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGGCTGGGACGGGATGCTCGACGTTCAGGCTTCCCGTGGCGGCGGCTGCAAGGCTCGCCGACAGGATcagg                                                                                                                                       <  2:597311/148‑1 (MQ=255)          ggtggCGCTTGGTTCATGGCTGCTCTGCCGATTTGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGGTCGCCGACAGGGTcaggc                                                                                                                                      <  2:800176/147‑1 (MQ=255)          agagGCGCTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTcaggc                                                                                                                                      <  2:800184/150‑1 (MQ=255)           gagGCGCTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTcaggcc                                                                                                                                     >  2:1699534/1‑150 (MQ=255)            agGCGCTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTcaggccc                                                                                                                                    <  2:680352/150‑1 (MQ=255)             ggCGCTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTcaggccca                                                                                                                                   <  1:244112/150‑1 (MQ=255)              gcgcTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTcaggcccag                                                                                                                                  <  1:602006/150‑1 (MQ=255)                gcTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTcaggcccaggc                                                                                                                                <  1:933956/150‑1 (MQ=255)                gcTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTcaggcccaggc                                                                                                                                <  2:1827460/150‑1 (MQ=255)                gcTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTcaggcccaggc                                                                                                                                <  2:560787/150‑1 (MQ=255)                   tGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTcaggcccaggccca                                                                                                                             <  1:1578019/150‑1 (MQ=255)                      ttCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTcaggcccaggcccaggc                                                                                                                          >  1:1829833/1‑150 (MQ=255)                        cATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCa                                                                                                                        <  1:1699534/150‑1 (MQ=255)                                ctctGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGcc                                                                                                                <  1:1558825/150‑1 (MQ=255)                                  ctGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCg                                                                                                              >  1:908996/1‑150 (MQ=255)                                    gCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGt                                                                                                            <  1:286247/150‑1 (MQ=255)                                     ccGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGtt                                                                                                           >  2:225938/1‑150 (MQ=255)                                       gATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTtg                                                                                                         <  2:1632991/150‑1 (MQ=255)                                        aTTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTtgg                                                                                                        <  1:1513246/150‑1 (MQ=255)                                        aTTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTtgg                                                                                                        <  2:569921/150‑1 (MQ=255)                                        aTTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTtgg                                                                                                        <  2:1066711/150‑1 (MQ=255)                                        aTTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTtgg                                                                                                        <  2:1802091/150‑1 (MQ=255)                                        aTTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTtgg                                                                                                        <  1:1084584/150‑1 (MQ=255)                                        aTTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTtgg                                                                                                        <  2:1844757/150‑1 (MQ=255)                                             cTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTa                                                                                                   >  1:1282576/1‑150 (MQ=255)                                              tAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTaa                                                                                                  <  1:1143388/150‑1 (MQ=255)                                               aGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTaaa                                                                                                 >  2:936328/1‑150 (MQ=255)                                                   ggTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGACAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTaaagaaa                                                                                             >  1:764522/1‑150 (MQ=255)                                                    gTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGACAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTaaagaaag                                                                                            <  2:764522/150‑1 (MQ=255)                                                        aaCCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTc                                                                                        <  2:1194642/150‑1 (MQ=255)                                                             gagGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACa                                                                                   <  2:1282576/150‑1 (MQ=255)                                                               ggCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAgg                                                                                 <  2:1103876/150‑1 (MQ=255)                                                                gCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTcagg                                                                                                                                       <  2:1294481/95‑1 (MQ=255)                                                                gCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTcagg                                                                                                                                       >  1:1294481/1‑95 (MQ=255)                                                                  aGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGc                                                                              >  2:1810803/1‑150 (MQ=255)                                                                     gCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTg                                                                           >  1:260595/1‑150 (MQ=255)                                                                      ccAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTgc                                                                          >  1:220742/1‑150 (MQ=255)                                                                       cAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGt                                                                                                            >  1:951592/1‑115 (MQ=255)                                                                       cAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGt                                                                                                            <  2:951592/115‑1 (MQ=255)                                                                       cAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTgcg                                                                         >  1:1175166/1‑150 (MQ=255)                                                                          gACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAAGCCACAGCTTTTCGCTCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTgcgcgc                                                                      >  2:1022099/1‑150 (MQ=255)                                                                             gAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTc                                                                   >  1:699699/1‑150 (MQ=255)                                                                             gAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTc                                                                   <  2:716001/150‑1 (MQ=255)                                                                                 gCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTcaggccc                                                                                                                                    >  1:1734149/1‑81 (MQ=255)                                                                                 gCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTcaggccc                                                                                                                                    <  2:1734149/81‑1 (MQ=255)                                                                                 gCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGt                                                                                >  2:832453/1‑133 (MQ=255)                                                                                 gCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGt                                                                                <  1:832453/133‑1 (MQ=255)                                                                                 gCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCgggg                                                               >  2:6149/1‑150 (MQ=255)                                                                                        cgccTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATAc                                                        >  2:716833/1‑150 (MQ=255)                                                                                         gccTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATAcc                                                       >  2:1768244/1‑150 (MQ=255)                                                                                            tgtgACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTg                                                    <  1:1810803/150‑1 (MQ=255)                                                                                             gtgACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTgg                                                   <  2:1829833/150‑1 (MQ=255)                                                                                                aCGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCg                                                >  2:1824904/1‑150 (MQ=255)                                                                                                  gggATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCGtt                                              >  1:461505/1‑150 (MQ=255)                                                                                                   ggATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCGTTg                                             <  1:1768244/150‑1 (MQ=255)                                                                                                       gCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCGTTGTcgc                                         <  2:260595/150‑1 (MQ=255)                                                                                                         tCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCGTTGTCgcgc                                       >  1:1519123/1‑150 (MQ=255)                                                                                                               ttCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGAcaagggaagcctgaacgtcgagcatcccgtcacaggcggcacggccttcgtcctggccctgcctctggtttcaccccctagcgaatcggcagagcatccatgaa                                         >  1:1009695‑M2/1‑38 (MQ=255)                                                                                                               ttCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGAcaagggaagcctgaacgtcgagcatcccgtcacaggcggcacggccttcgtcctggccctgcctctggtttcaccccctagcgaatcggcagagcatccatgaa                                         <  2:1009695‑M2/142‑105 (MQ=255)                                                                                                               ttCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTc                                                                                        <  1:1216257/95‑1 (MQ=255)                                                                                                               ttCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTc                                                                                        >  2:1216257/1‑95 (MQ=255)                                                                                                                  aGGCTTCCCGCGGCGGCGGGGGCAAGGCCCGCCGACAGGGTCAGGCCCAAGCCCAGGCCATGCTCGCCCGGTTTGGTTGTAAATAAAGGTTCGATCAGGTGCTTGCGCGCTTCGGCGTCGATACCGTGGCCGTTGTGGCGCACCTGCaaa                              <  2:478399/150‑1 (MQ=255)                                                                                                                   ggCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAGGCTGCGAGCAGGTGCGTGCACGCTTCGGGGTCGATACCGTGGCCCTTGTCTCGCACCTGCAAAc                             >  2:366936/1‑150 (MQ=255)                                                                                                                    gCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGAcaagggaagcctgaacgtcgagcatcccgtcacaggcggcacggccttcgtcctggccctgcctctgg                                                                             >  1:1239153‑M2/1‑33 (MQ=255)                                                                                                                    gCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGAcaagggaagcctgaacgtcgagcatcccgtcacaggcggcacggccttcgtcctggccctgcctctgg                                                                             <  2:1239153‑M2/101‑69 (MQ=255)                                                                                                                    gCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTgcgc                                                                        >  1:1084063/1‑106 (MQ=255)                                                                                                                    gCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTgcgc                                                                        <  2:1084063/106‑1 (MQ=255)                                                                                                                     cTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCGTTGTCGCGCACCTGCAAACgg                           >  2:996864/1‑150 (MQ=255)                                                                                                                       tCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCGTTGTCGCGCACCTGCAAACGGTa                         <  1:1665376/150‑1 (MQ=255)                                                                                                                       tCCCGTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCGTTGTCGCGCACCTGCAAACGGTa                         <  1:1457025/150‑1 (MQ=255)                                                                                                                         ccTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAg                                                                                  <  1:61184/91‑1 (MQ=255)                                                                                                                         ccTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAg                                                                                  >  2:61184/1‑91 (MQ=255)                                                                                                                          cTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGa                                                           >  2:1784624/1‑113 (MQ=255)                                                                                                                          cTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGa                                                           <  1:1784624/113‑1 (MQ=255)                                                                                                                           ttGGCGGCGGCGGCAAGGCTCGCCGAcaagggaagcctgaacgtcgagcatcccgtcacaggcggcacggccttcgtcctggccctgcctctgg                                                                             <  1:1428563‑M2/94‑69 (MQ=255)                                                                                                                           ttGGCGGCGGCGGCAAGGCTCGCCGAcaagggaagcctgaacgtcgagcatcccgtcacaggcggcacggccttcgtcctggccctgcctctgg                                                                             >  2:1428563‑M2/1‑26 (MQ=255)                                                                                                                           ttGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGAt                                                          >  2:1709445/1‑113 (MQ=255)                                                                                                                           ttGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGAt                                                          <  1:1709445/113‑1 (MQ=255)                                                                                                                           ttGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCGTTGTCGCGCACCTGCAAACGGTACTTg                     >  1:144608/1‑150 (MQ=255)                                                                                                                           ttGGCGGCGGCGGCAAGGCTCGCCGAAAAGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCGTTGTCGCGCACCTGCAAACGGTACTTg                     >  1:356724/1‑150 (MQ=255)                                                                                                                              gcggcggcggcAAGGCTCGCCGCcaagggaagcctgaacgtcgagcatcccgtcacaggcggcacggccttcgtcctggccctgcctctggtttcaccccctagcgaatc                                                          <  1:423907‑M2/110‑88 (MQ=255)                                                                                                                              gcggcggcggcAAGGCTCGCCGCcaagggaagcctgaacgtcgagcatcccgtcacaggcggcacggccttcgtcctggccctgcctctggtttcaccccctagcgaatc                                                          >  2:423907‑M2/1‑23 (MQ=255)                                                                                                                                ggcggcggcAAGGCTCGCCGAAAGGGTCAGGCCCAGGCCAAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCGTTGTCGCGCACCTGCAAACGGTACTTGTCAcc                <  1:225938/150‑1 (MQ=255)                                                                                                                                 gcggcggcAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCGTTGTCGCGCACCTGCAAACGGTa                         <  1:462293/140‑1 (MQ=255)                                                                                                                                 gcggcggcAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCGTTGTCGCGCACCTGCAAACGGTa                         >  2:462293/1‑140 (MQ=255)                                                                                                                                  cggcggcAAGGCTCGCCGACAGGGTCCGGGCTCGCCGCCCGCCATCTGGGCGCGGTTGGGGGGTAAATAAAGGTTCGAACAGGTGCTTGCCCGCTTCGGGGTCGATAACGTGGCCGTTGTCGCCCACCTGCAAACGGTACTTGTCACCCt              <  2:908996/150‑1 (MQ=255)                                                                                                                                      ggcAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCGTTGTCGCGCACCTGCAAACGGTACTTGTCACCCTGCaa          >  1:62845/1‑150 (MQ=255)                                                                                                                                         aaGGCTCCCCGACAGCTTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGAACCCGAGGCTAAGGCCGGGTGCTTGCGCGCGTCTGGGTCGATACCGTGGCCGTTGTCGTGCATCTGCAAACGGTACTTGTCACCCTGCAACTc       <  1:443035/150‑1 (MQ=255)                                                                                                                                              tCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCGTTGTCGCGCACCTGCAAACGGTACTTGTCACCCTGCAACTCGCCtt  >  2:1518699/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                AGGACGGTAAGAGGCGCTTGGTTCATGGATGCTCTGCCGATTCGCTAGGGGGTGAAACCAGAGGCAGGGCCAGGACGAAGGCCGTGCCGCCTGTGACGGGATGCTCGACGTTCAGGCTTCCCTTGGCGGCGGCGGCAAGGCTCGCCGACAGGGTCAGGCCCAGGCCCAGGCCATGCTCGCCCGGTTTGGTGGTAAAGAAAGGTTCGAACAGGTGCTTGCGCGCTTCGGGGTCGATACCGTGGCCGTTGTCGCGCACCTGCAAACGGTACTTGTCACCCTGCAACTCGCCTT  >  NC_002947/1221286‑1221576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.