New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6127506 =	71 (0.970)	4 (0.060)	4/234	NT	6.0%	coding (435/909 nt)	PP_5375	LysR family transcriptional regulator
	?	NC_002947	6127531 =	59 (0.860)					coding (410/909 nt)	PP_5375	LysR family transcriptional regulator

CCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTGACTTGTTGGTTGCCTTGCCA  >  NC_002947/6127383‑6127670                                                                                                                                                        |                                                                                                                                            cccTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTa                                                                                                                                            >  2:1211684/1‑150 (MQ=255)  ccTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTaa                                                                                                                                           >  1:1586596/1‑150 (MQ=255)  ccTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTaa                                                                                                                                           <  2:1187622/150‑1 (MQ=255)    ttCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATc                                                                                                                                         <  1:667677/150‑1 (MQ=255)       gATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCtt                                                                                                                                      <  2:156279/150‑1 (MQ=255)              ctCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGGGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGGTGCAGTAGTAAAA‑CTTCGGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACCTGa                                                                                                                               >  1:1071770/1‑150 (MQ=255)              ctCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑GGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGa                                                                                                                               >  1:1071675/1‑150 (MQ=255)              ctCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGa                                                                                                                               <  1:1473298/150‑1 (MQ=255)                   ttGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTg                                                                                                                          <  1:1185987/150‑1 (MQ=255)                     gCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTggg                                                                                                                        <  1:649568/150‑1 (MQ=255)                      cGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGc                                                                                                                       <  2:155443/150‑1 (MQ=255)                             cTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAACGACACCCTG‑‑CT‑CGGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATc                                                                                                                >  2:543653/1‑150 (MQ=255)                              tggcgtcgctgtggttactgcccaaggtgtcggaattccagagtgcccatgaaaacatcgacctgcggatcatcgcccacgatcatgtgaaggattacgccaggtcgctgtcgagcctggcgTAATCCTTCACATGATCGTGGGCgatga                                                                                                                  <  1:1502884‑M2/28‑1 (MQ=255)                              tGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTgg                                                                                                                         <  2:1259606/140‑1 (MQ=255)                              tGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTgg                                                                                                                         >  1:1259606/1‑140 (MQ=255)                                gCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCGGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAATG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGc                                                                                                             >  2:1329581/1‑150 (MQ=255)                                    gATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCCTG‑GCG‑CTTGCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGt                                                                                                         <  2:958284/150‑1 (MQ=255)                                       tggCCAGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGa                                                                                                      <  1:541469/149‑1 (MQ=255)                                         gCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACAt                                                                                                                                 >  2:1033880/1‑121 (MQ=255)                                         gCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACAt                                                                                                                                 <  1:1033880/121‑1 (MQ=255)                                         gCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATg                                                                                                    >  1:409270/1‑150 (MQ=255)                                                 gCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATg                                                                                            <  1:1446530/150‑1 (MQ=255)                                                  cccaaggtgtcggaattccagagtgcccatgaaaacatcgacctgcggatcatcgcccacgatcatgtgaaggattacgccaggtcgctgtcgagcctggcgTAATCCTTc                                                                                                                                     >  2:227246‑M2/103‑111 (MQ=255)                                                  cccaaggtgtcggaattccagagtgcccatgaaaacatcgacctgcggatcatcgcccacgatcatgtgaaggattacgccaggtcgctgtcgagcctggcgTAATCCTTc                                                                                                                                     <  1:227246‑M2/9‑1 (MQ=255)                                                   acacCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTc                                                                                                                                     <  1:885958/107‑1 (MQ=255)                                                   acacCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTc                                                                                                                                     >  2:885958/1‑107 (MQ=255)                                                     acCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATc                                                                                                                             <  1:375455/113‑1 (MQ=255)                                                     acCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATc                                                                                                                             >  2:375455/1‑113 (MQ=255)                                                     acCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGTTGGTCCGCAGGTCGATGTTTTCATGGGCa                                                                                        <  1:543653/150‑1 (MQ=255)                                                     acCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCa                                                                                        <  1:453960/150‑1 (MQ=255)                                                       cAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGttt                                                                                                 <  1:1420325/139‑1 (MQ=255)                                                       cAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGttt                                                                                                 >  2:1420325/1‑139 (MQ=255)                                                          gAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTg                                                                                   >  2:1559338/1‑150 (MQ=255)                                                               tttCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGCCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAAtt                                                                              >  1:34079/1‑150 (MQ=255)                                                                   ttcCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGa                                                                          >  2:1151226/1‑150 (MQ=255)                                                                      cGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGacac                                                                       <  2:1788100/150‑1 (MQ=255)                                                                            cAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTggg                                                                 <  1:1876406/150‑1 (MQ=255)                                                                              gcggcgTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCa                                                               <  2:34079/150‑1 (MQ=255)                                                                              gcggcgTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCa                                                               <  2:1889561/150‑1 (MQ=255)                                                                                 gcgTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGc                                                                                         >  2:1650057/1‑121 (MQ=255)                                                                                 gcgTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGc                                                                                         <  1:1650057/121‑1 (MQ=255)                                                                                            aTGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGAc                                                 <  2:1815144/150‑1 (MQ=255)                                                                                              gTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTcc                                                                            <  2:911281/121‑1 (MQ=255)                                                                                              gTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTcc                                                                            >  1:911281/1‑121 (MQ=255)                                                                                              gTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCa                                                               <  2:1923894/134‑1 (MQ=255)                                                                                              gTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCa                                                               >  1:1923894/1‑134 (MQ=255)                                                                                                 tcatcgcccacgatcatgtgaaggattaCGCCAGGCTCGACAG‑CGA‑CCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCa                                             <  1:1502884‑M1/122‑1 (MQ=255)                                                                                                 cTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATc                                                                                                                >  2:1861003/1‑82 (MQ=255)                                                                                                 cTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATc                                                                                                                <  1:1861003/82‑1 (MQ=255)                                                                                                 cTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCAt                                            >  1:896854/1‑150 (MQ=255)                                                                                                 cTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCAt                                            >  2:552053/1‑150 (MQ=255)                                                                                                    gggCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGc                                         <  2:1586596/150‑1 (MQ=255)                                                                                                           gggTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACtg                                  <  1:1151226/150‑1 (MQ=255)                                                                                                              ttGCAGTAGTAAGG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGGGACGCCATGGCGGTACtggtg                               <  1:1329581/150‑1 (MQ=255)                                                                                                                  agtagtAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCaa                           >  1:1588644/1‑150 (MQ=255)                                                                                                                   gtagtaAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAAc                          >  2:1764005/1‑150 (MQ=255)                                                                                                                    tagtaAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGc                                                                                                                       >  1:257860/1‑56 (MQ=255)                                                                                                                    tagtaAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGc                                                                                                                       <  2:257860/56‑1 (MQ=255)                                                                                                                    tagtaAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACg                         >  1:371935/1‑150 (MQ=255)                                                                                                                    gaaggattaCGCCAGGCTCGACAG‑CGA‑CCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTggg                                                                 <  1:227246‑M1/102‑1 (MQ=255)                                                                                                                    gaaggattaCGCCAGGCTCGACAG‑CGA‑CCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTggg                                                                 >  2:227246‑M1/10‑111 (MQ=255)                                                                                                                     agtaAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACgg                        >  1:1311883/1‑150 (MQ=255)                                                                                                                       taAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGGTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTg                      >  1:135127/1‑150 (MQ=255)                                                                                                                        cagg‑cgcCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTGa                     >  1:795997/4‑150 (MQ=255)                                                                                                                         aaG‑CGGCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTGAc                    <  1:1043929/150‑1 (MQ=255)                                                                                                                         aaG‑CGCCAGG‑TCG‑CTGTCGAGCCTTGCGTAATGCTTCACATGATCGTGGGCGAGGATTCGCGGGCCGATGTGTTCGTGGGCACTCTGGAATTCGGAAACCTTGGGCAGTAACGACAGAGACGCCAGGGCGGTACTGGGGGCAACGGTGaa                    >  1:940322/1‑149 (MQ=255)                                                                                                                         aaG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTGATGGGCACTTTGGAATTCCGACACTTTGGGCAGTAACTACAGGGGCGCCATGCCTGTACCGGTGGCAACGGTGAc                    >  2:678485/1‑150 (MQ=255)                                                                                                                         aaG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTGAc                    <  1:1764005/150‑1 (MQ=255)                                                                                                                              GCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTGACttgt                >  1:1559338‑M1/1‑150 (MQ=255)                                                                                                                                CAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTGACttgttg              >  2:795997‑M1/1‑150 (MQ=255)                                                                                                                                 AGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCCACGCCATGGCGGTACTGGTGGCAACGGTGACTTgttgg             <  1:1303258‑M1/150‑1 (MQ=255)                                                                                                                                   G‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAg                                                     >  2:1811745‑M1/1‑108 (MQ=255)                                                                                                                                   G‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAg                                                     <  1:1811745‑M1/108‑1 (MQ=255)                                                                                                                                       tcgacagcgacctggcgTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTGACTTGTTGGttgc         <  2:1502884‑M2/133‑1 (MQ=255)                                                                                                                                          tGTCGAGCGTGGCGTAATCCTTCACATGATCGGGGGTGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCACCGGTGACTTGTTGGttgcctt      >  2:14846/1‑150 (MQ=255)                                                                                                                                              gAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACtggt                                >  2:1454921/1‑120 (MQ=255)                                                                                                                                              gAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACtggt                                <  1:1454921/120‑1 (MQ=255)                                                                                                                                              gAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTGACTTGTTGGTTGCCTTGCCa  >  1:1203151/1‑150 (MQ=255)                                                                                                                                              gAGCCCGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTGACTTGTTGGTTGCCTTGCCa  >  1:739323/1‑150 (MQ=255)                                                                                                                                                   tggcgTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTgg                                                                                  <  1:8459‑M2/60‑1 (MQ=255)                                                                                                                                                   tggcgTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTgg                                                                                  >  2:8459‑M2/6‑65 (MQ=255)                                                                                                                                                    ggcgTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTa                                                            <  1:839821‑M2/82‑1 (MQ=255)                                                                                                                                                    ggcgTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTa                                                            >  2:839821‑M2/5‑86 (MQ=255)                                                                                                                                                        |                                                                                                                                            CCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTGACTTGTTGGTTGCCTTGCCA  >  NC_002947/6127383‑6127670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.